RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 ANKARQ7Z5J8 1434 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 SUPT7LO94864 414 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 SLC1A1P43005 524 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 FAM45BPQ6NSW5 357 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 FRMD5Q7Z6J6 570 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 CYP4X1Q8N118 509 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 VTA1Q9NP79 307 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 KLC4Q9NSK0 619 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 SMARCAL1Q9NZC9 954 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 ANAPC2Q9UJX6 822 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 RAB23Q9ULC3 237 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 GRID2IPA4D2P6 1211 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 NR5A2O00482 541 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 CCDC130P13994 396 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 LIFRP42702 1097 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 TBC1D10CQ8IV04 446 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 UTP15Q8TED0 518 aaKnown RBP13.66□□□□□ -0.22
NEK9-201ENST00000238616 DPP3Q9NY33 737 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 HERC5Q9UII4 1024 aaKnown RBP13.66□□□□□ -0.22
NEK9-201ENST00000238616 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 CDY1Q9Y6F8 540 aa13.66□□□□□ -0.22
NEK9-201ENST00000238616 ZNF638Q14966 1978 aaKnown RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 NT5DC3Q86UY8 548 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 CCDC185Q8N715 623 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 RTL3Q8N8U3 475 aaKnown RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 ZSCAN18Q8TBC5 510 aaPredicted RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 MRPS31Q92665 395 aaKnown RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 ZNF669Q96BR6 464 aaPredicted RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 OXCT2Q9BYC2 517 aaPredicted RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 ARMC7Q9H6L4 198 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 SPON1Q9HCB6 807 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 RGS18Q9NS28 235 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 GMFGO60234 142 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 HOXA7P31268 230 aaPredicted RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 ACADSBP45954 432 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 SPATA21Q7Z572 469 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 PODNQ7Z5L7 613 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 CSGALNACT1Q8TDX6 532 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 ATP6V1G3Q96LB4 118 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 TUFT1Q9NNX1 390 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 GGA3Q9NZ52 723 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 AXIN2Q9Y2T1 843 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 PITPNM2Q9BZ72 1349 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 AP1G2O75843 785 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 CCNIQ14094 377 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 LINC00523Q86TU6 105 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 DCP1BQ8IZD4 617 aaKnown RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 AKAP7Q9P0M2 348 aaPredicted RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 INSRP06213 1382 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 URODP06132 367 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 EPHB3P54753 998 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 ARMCX4Q5H9R4 360 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 GRAMD1AQ96CP6 724 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 KLF6Q99612 283 aaPredicted RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 NLNQ9BYT8 704 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 CTSEP14091 401 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 STAT4Q14765 748 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 SEMA4DQ92854 862 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 COLEC11Q9BWP8 271 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 EFCAB6Q5THR3 1501 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 CASTOR2A6NHX0 329 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 CBX4O00257 560 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 MSH4O15457 936 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 LARGE1O95461 756 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 MSH3P20585 1137 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 TGM3Q08188 693 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 CAMK1Q14012 370 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 POM121L1PQ3SYA9 428 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 ZC2HC1CQ53FD0 456 aaPredicted RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 SETD3Q86TU7 594 aaPredicted RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 SLC13A5Q86YT5 568 aaPredicted RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 ATG16L2Q8NAA4 619 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 RIN2Q8WYP3 895 aaPredicted RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 COL26A1Q96A83 441 aa13.65□□□□□ -0.22
NEK9-201ENST00000238616 STRBPQ96SI9 672 aaKnown RBP13.65□□□□□ -0.22
NEK9-201ENST00000238616 CFAP73A6NFT4 308 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 H7C4K7 107 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 HNRNPH2P55795 449 aaKnown RBP13.64□□□□□ -0.23
NEK9-201ENST00000238616 EMC2Q15006 297 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 PDZK1Q5T2W1 519 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 USP7Q93009 1102 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 TEX13BQ9BXU2 312 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 EPC1Q9H2F5 836 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 POLE3Q9NRF9 147 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 PFASO15067 1338 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 C1DQ13901 141 aaKnown RBP13.64□□□□□ -0.23
NEK9-201ENST00000238616 TRIP10Q15642 601 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 CACTIN-AS1Q8N1I8 211 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 ADGRE3Q9BY15 652 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 SOHLH2Q9NX45 425 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 CNPP09543 421 aaKnown RBP13.64□□□□□ -0.23
NEK9-201ENST00000238616 C4BPBP20851 252 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 GPD1P21695 349 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 EFEMP1Q12805 493 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 NDUFAF6Q330K2 333 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 FAXCQ5TGI0 409 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 NCAPD2Q15021 1401 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 FOSL2P15408 326 aa13.64□□□□□ -0.23
NEK9-201ENST00000238616 PPP2R1BP30154 601 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms