RNA–Protein interactions for RNA: ENST00000238497.9

VPS4B-201, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS4B, Length 3,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-201ENST00000238497 CCDC137Q6PK04 289 aaKnown RBP9.12□□□□□ -0.95
VPS4B-201ENST00000238497 FAM71AQ8IYT1 594 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 SELENOSQ9BQE4 189 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 PAAF1Q9BRP4 392 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 STRA6Q9BX79 667 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 PCSK1NQ9UHG2 260 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 TTC7AQ9ULT0 858 aaPredicted RBP9.12□□□□□ -0.95
VPS4B-201ENST00000238497 POLIQ9UNA4 740 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 GRAP2O75791 330 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 CTSAP10619 480 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 KRT10P13645 584 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 ARPP19P56211 112 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 GRIK3Q13003 919 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 SMTNL2Q2TAL5 461 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 DCAF4L1Q3SXM0 396 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 TAS1R1Q7RTX1 841 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 DDX53Q86TM3 631 aaKnown RBP9.12□□□□□ -0.95
VPS4B-201ENST00000238497 AENQ8WTP8 325 aaKnown RBP9.12□□□□□ -0.95
VPS4B-201ENST00000238497 EPHX3Q9H6B9 360 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 GOLGA2P5Q9HBQ8 144 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 MED4Q9NPJ6 270 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 CLEC1BQ9P126 229 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 COL4A4P53420 1690 aaPredicted RBP9.12□□□□□ -0.95
VPS4B-201ENST00000238497 NLRC5Q86WI3 1866 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 TRIOO75962 3097 aa9.12□□□□□ -0.95
VPS4B-201ENST00000238497 I3L4J1 428 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 AGPSO00116 658 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 ACSL3O95573 720 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 GLUD2P49448 558 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CDO1Q16878 200 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CTC1Q2NKJ3 1217 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 ZNF699Q32M78 642 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 SLFN12LQ6IEE8 588 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 FUT10Q6P4F1 479 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 EMBQ6PCB8 327 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 C10orf67Q8IYJ2 551 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 COLGALT2Q8IYK4 626 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 C1orf131Q8NDD1 294 aaKnown RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 BCAS4Q8TDM0 211 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 SHC3Q92529 594 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CASP10Q92851 521 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 PWWP2AQ96N64 755 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 ACAP3Q96P50 834 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CDCA3Q99618 268 aaPredicted RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CDT1Q9H211 546 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CXCL16Q9H2A7 254 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 C10orf88Q9H8K7 445 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 ZWILCHQ9H900 591 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 PIDD1Q9HB75 910 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 APOBEC3GQ9HC16 384 aaKnown RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 ARHGAP28Q9P2N2 729 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 NOVA2Q9UNW9 492 aaKnown RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CLASP2O75122 1294 aaKnown RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CNPP09543 421 aaKnown RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CCT5P48643 541 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 TUSC3Q13454 348 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CUL2Q13617 745 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CCDC38Q502W7 563 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 KCNT1Q5JUK3 1230 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 LIN9Q5TKA1 542 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 VN1R2Q8NFZ6 395 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 FBXO25Q8TCJ0 367 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 MGARPQ8TDB4 240 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 FMO2Q99518 471 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 TMEM175Q9BSA9 504 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 GPR62Q9BZJ7 368 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 ZBP1Q9H171 429 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 ADAM28Q9UKQ2 775 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 FNDC1Q4ZHG4 1894 aaPredicted RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 MAP3K6O95382 1288 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 TNNC2P02585 160 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 ADCY8P40145 1251 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 RWDD2BP57060 319 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 RPL7AP62424 266 aaKnown RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CALCOCO2Q13137 446 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 ACAD10Q6JQN1 1059 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 PRSS55Q6UWB4 352 aaPredicted RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 PLCD3Q8N3E9 789 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 ACO2Q99798 780 aaKnown RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 TIPINQ9BVW5 301 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 RPF1Q9H9Y2 349 aaKnown RBP9.11□□□□□ -0.95
VPS4B-201ENST00000238497 MLXIPLQ9NP71 852 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 TBK1Q9UHD2 729 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 KCNG1Q9UIX4 513 aa9.11□□□□□ -0.95
VPS4B-201ENST00000238497 CARNS1A5YM72 827 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 H0YCG3 227 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 SOD2P04179 222 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 ADH1AP07327 375 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 MYZAPP0CAP1 466 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 GARTP22102 1010 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 CBX2Q14781 532 aaPredicted RBP9.1□□□□□ -0.95
VPS4B-201ENST00000238497 FAM187BQ17R55 369 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 DUOXA2Q1HG44 320 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 USP41Q3LFD5 358 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 ATAT1Q5SQI0 421 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 SCYL2Q6P3W7 929 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 FMNL3Q8IVF7 1028 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 EMC1Q8N766 993 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 UBA3Q8TBC4 463 aa9.1□□□□□ -0.95
VPS4B-201ENST00000238497 RSPH1Q8WYR4 309 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms