RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 TRAPPC3O43617 180 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 PHF2O75151 1096 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 TADA2AO75478 443 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 HEXIM1O94992 359 aaKnown RBP15.96■□□□□ 0.15
HDHD3-201ENST00000238379 OAZ2O95190 189 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 MIPP30301 263 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 PCK1P35558 622 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 CACNA2D1P54289 1103 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 ADCY1Q08828 1119 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 ADIGQ0VDE8 80 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 CYP1B1Q16678 543 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 HADHQ16836 314 aaKnown RBP15.96■□□□□ 0.15
HDHD3-201ENST00000238379 CNKSR3Q6P9H4 555 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 TMCO3Q6UWJ1 677 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 CCNI2Q6ZMN8 369 aaPredicted RBP15.96■□□□□ 0.15
HDHD3-201ENST00000238379 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.96■□□□□ 0.15
HDHD3-201ENST00000238379 CCDC50Q8IVM0 306 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 RAPGEF5Q92565 580 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 RNF25Q96BH1 459 aaPredicted RBP15.96■□□□□ 0.15
HDHD3-201ENST00000238379 RBM41Q96IZ5 413 aaKnown RBP15.96■□□□□ 0.15
HDHD3-201ENST00000238379 KCNK16Q96T55 309 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 PLEKHA4Q9H4M7 779 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 CSNK1G1Q9HCP0 422 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 ARFGAP3Q9NP61 516 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 KLHL11Q9NVR0 708 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 DDX56Q9NY93 547 aaKnown RBP15.96■□□□□ 0.15
HDHD3-201ENST00000238379 HCSTQ9UBK5 93 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 MTUS1Q9ULD2 1270 aa15.96■□□□□ 0.15
HDHD3-201ENST00000238379 SEC31AO94979 1220 aaKnown RBP15.96■□□□□ 0.14
HDHD3-201ENST00000238379 KRT1P04264 644 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 ALDH2P05091 517 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 KRT7P08729 469 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 RFC2P35250 354 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 SLC11A1P49279 550 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 CTCFP49711 727 aaPredicted RBP15.96■□□□□ 0.14
HDHD3-201ENST00000238379 KLF1Q13351 362 aaPredicted RBP15.96■□□□□ 0.14
HDHD3-201ENST00000238379 IKBKEQ14164 716 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 C15orf59Q2T9L4 293 aaPredicted RBP15.96■□□□□ 0.14
HDHD3-201ENST00000238379 RAB6CQ53S08 254 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 MFSD7Q6UXD7 560 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 CCDC26Q8TAB7 109 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 ACSF2Q96CM8 615 aaPredicted RBP15.96■□□□□ 0.14
HDHD3-201ENST00000238379 SMARCD1Q96GM5 515 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 CFAP57Q96MR6 1250 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 SLITRK1Q96PX8 696 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 MRPL9Q9BYD2 267 aaKnown RBP15.96■□□□□ 0.14
HDHD3-201ENST00000238379 OSBPL8Q9BZF1 889 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 UBXN6Q9BZV1 441 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 RAB6CQ9H0N0 254 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 LRRC4Q9HBW1 653 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 ADAM28Q9UKQ2 775 aa15.96■□□□□ 0.14
HDHD3-201ENST00000238379 MICAL3Q7RTP6 2002 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 ZSCAN5CA6NGD5 496 aaPredicted RBP15.95■□□□□ 0.14
HDHD3-201ENST00000238379 HHLA1C9JL84 531 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 MYBL2P10244 700 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 CHRNA3P32297 505 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 NDUFV1P49821 464 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 SMC1AQ14683 1233 aaKnown RBP15.95■□□□□ 0.14
HDHD3-201ENST00000238379 MAPRE1Q15691 268 aaKnown RBP15.95■□□□□ 0.14
HDHD3-201ENST00000238379 EFHC1Q5JVL4 640 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 BEND6Q5SZJ8 279 aaPredicted RBP15.95■□□□□ 0.14
HDHD3-201ENST00000238379 MAATS1Q7Z4T9 603 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 C11orf84Q9BUA3 381 aaPredicted RBP15.95■□□□□ 0.14
HDHD3-201ENST00000238379 HEMGNQ9BXL5 484 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 RHOBTB2Q9BYZ6 727 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 ZWILCHQ9H900 591 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 GDF3Q9NR23 364 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.95■□□□□ 0.14
HDHD3-201ENST00000238379 MARCH5Q9NX47 278 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 USP18Q9UMW8 372 aa15.95■□□□□ 0.14
HDHD3-201ENST00000238379 C3orf70A6NLC5 250 aaPredicted RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 TBKBP1A7MCY6 615 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 BHMG1C9JSJ3 638 aaPredicted RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 SYN3O14994 580 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 TTI1O43156 1089 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 ERLIN1O75477 346 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 TRUB2O95900 331 aaKnown RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 ITGB8P26012 769 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 TNFRSF8P28908 595 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 SDC4P31431 198 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 PTPN9P43378 593 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 TKTL1P51854 596 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 RABGGTBP53611 331 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 COPS2P61201 443 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 MRPS5P82675 430 aaKnown RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 ATP11AP98196 1134 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 TSPY1Q01534 308 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 GUCY2DQ02846 1103 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 RAB41Q5JT25 222 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 KCNT1Q5JUK3 1230 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 TTC27Q6P3X3 843 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 SPOCD1Q6ZMY3 1216 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 CYP4V2Q6ZWL3 525 aaPredicted RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 NECAB2Q7Z6G3 386 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 IFT20Q8IY31 132 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 C12orf50Q8NA57 414 aaPredicted RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 MAIP1Q8WWC4 291 aa15.94■□□□□ 0.14
HDHD3-201ENST00000238379 NDRG1Q92597 394 aaKnown RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 MAGOHBQ96A72 148 aaKnown RBP15.94■□□□□ 0.14
HDHD3-201ENST00000238379 PEBP4Q96S96 227 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms