RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 PLXNA1Q9UIW2 1896 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 CFAP69A5D8W1 941 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 ATP6V1G2O95670 118 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 NDST1P52848 882 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 ADCY1Q08828 1119 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 BOLA3Q53S33 107 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 FITM2Q8N6M3 262 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 FAM71DQ8N9W8 422 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 TEKT4Q8WW24 435 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 RXFP2Q8WXD0 754 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 TACO1Q9BSH4 297 aaKnown RBP22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 GBA2Q9HCG7 927 aaPredicted RBP22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 PHTF1Q9UMS5 762 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 USH1CQ9Y6N9 552 aa22.97■■□□□ 1.27
SMARCD2-201ENST00000225742 TM9SF1O15321 606 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 CHADO15335 359 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 PRPSAP2O60256 369 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 EDF1O60869 148 aaKnown RBP22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 ITGBL1O95965 494 aaPredicted RBP22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 PDGFRAP16234 1089 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 DESP17661 470 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 RPA3P35244 121 aaPredicted RBP22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 MSH2P43246 934 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 CDH6P55285 790 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 MSS51Q4VC12 460 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 MAP1SQ66K74 1059 aaPredicted RBP22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 OR6B2Q6IFH4 312 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 DARS2Q6PI48 645 aaKnown RBP22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 TBC1D1Q86TI0 1168 aaPredicted RBP22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 FBF1Q8TES7 1133 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 ZBTB10Q96DT7 871 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 CDCA5Q96FF9 252 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 CPB2Q96IY4 423 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 PEBP4Q96S96 227 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 CYTH2Q99418 400 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 TBCBQ99426 244 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 PAFAH2Q99487 392 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 CD248Q9HCU0 757 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 TMEM63AO94886 807 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 CCNB1P14635 433 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 TGM2P21980 687 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 ALDH3A1P30838 453 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 SSTR1P30872 391 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 GRM5P41594 1212 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 SETDB1Q15047 1291 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 PREPLQ4J6C6 727 aaPredicted RBP22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 TAPT1Q6NXT6 567 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 CAPN12Q6ZSI9 719 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 ECHDC2Q86YB7 292 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 C4orf33Q8N1A6 199 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 UBA3Q8TBC4 463 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 PLEKHA5Q9HAU0 1116 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 TXLNGQ9NUQ3 528 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 PAK5Q9P286 719 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 PNMA3Q9UL41 463 aa22.96■■□□□ 1.27
SMARCD2-201ENST00000225742 ZNF487B1APH4 448 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 TSPAN1O60635 241 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 YARSP54577 528 aaKnown RBP22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 PDE4CQ08493 712 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 TAF5Q15542 800 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 DCAF4L1Q3SXM0 396 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 BBS9Q3SYG4 887 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 SPDYAQ5MJ70 313 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 WLSQ5T9L3 541 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 MTHFD1LQ6UB35 978 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 C4orf22Q6V702 233 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 FAM183BPQ6ZVS7 135 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 CYP4V2Q6ZWL3 525 aaPredicted RBP22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 CCDC91Q7Z6B0 441 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 ZNF410Q86VK4 478 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 FAM228AQ86W67 206 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 KLHL29Q96CT2 875 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 OPTNQ96CV9 577 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 RTP4Q96DX8 246 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 RMDN2Q96LZ7 410 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 RNF157Q96PX1 679 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 C10orf88Q9H8K7 445 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 KIF9Q9HAQ2 790 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 ARHGEF3Q9NR81 526 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 TSPAN16Q9UKR8 245 aa22.95■■□□□ 1.26
SMARCD2-201ENST00000225742 A0A1W2PPM1 405 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 VGLL3A8MV65 326 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 BANF1O75531 89 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 DCTN3O75935 186 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 ALADP13716 330 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 CYP3A5P20815 502 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 CCNA1P78396 465 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 GAD2Q05329 585 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 TTLL12Q14166 644 aaPredicted RBP22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 KCNJ11Q14654 390 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 SLC1A5Q15758 541 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 ZNF792Q3KQV3 632 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 ASRGL1Q7L266 308 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 ZNF398Q8TD17 642 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 TRAF3IP1Q8TDR0 691 aaPredicted RBP22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 MZB1Q8WU39 189 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 DCAKDQ8WVC6 231 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 NOD2Q9HC29 1040 aa22.94■■□□□ 1.26
SMARCD2-201ENST00000225742 PFKMP08237 780 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms