RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 C2orf71A6NGG8 1288 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 TYROBPO43914 113 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 CILPO75339 1184 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 CYP2C8P10632 490 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 ARF4P18085 180 aaPredicted RBP15.29■□□□□ 0.04
CNOT3-201ENST00000221232 MKRN3Q13064 507 aaKnown RBP15.29■□□□□ 0.04
CNOT3-201ENST00000221232 KRT81Q14533 505 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 CEP128Q6ZU80 1094 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 FAM183BPQ6ZVS7 135 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 C7orf31Q8N865 590 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 KCNV2Q8TDN2 545 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 LHX5Q9H2C1 402 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 RAB6BQ9NRW1 208 aa15.29■□□□□ 0.04
CNOT3-201ENST00000221232 POLR2AP24928 1970 aaKnown RBP15.28■□□□□ 0.04
CNOT3-201ENST00000221232 KCNN4O15554 427 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 PHBP35232 272 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 PDK4Q16654 411 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 PLPPR4Q7Z2D5 763 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 POLNQ7Z5Q5 900 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 ACOT1Q86TX2 421 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 LRRC6Q86X45 466 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 DCPSQ96C86 337 aaKnown RBP15.28■□□□□ 0.04
CNOT3-201ENST00000221232 TSPAN16Q9UKR8 245 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.28■□□□□ 0.04
CNOT3-201ENST00000221232 TNFSF13BQ9Y275 285 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 DNAH12Q6ZR08 3092 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 A0A0G2JND7 137 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 KBTBD13C9JR72 458 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 PRPF4O43172 522 aaKnown RBP eCLIP15.28■□□□□ 0.041e-8■■■□□ 15.1
CNOT3-201ENST00000221232 HBP1O60381 514 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 ANP32DO95626 131 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 CDC25CP30307 473 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 ATXN1P54253 815 aaKnown RBP15.28■□□□□ 0.04
CNOT3-201ENST00000221232 ROR1Q01973 937 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 FAAP100Q0VG06 881 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 NR1H3Q13133 447 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 KBTBD12Q3ZCT8 623 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 GLRA4Q5JXX5 417 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 RNF43Q68DV7 783 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 ILDR2Q71H61 639 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 PCGF5Q86SE9 256 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 PRPF39Q86UA1 669 aaKnown RBP15.28■□□□□ 0.04
CNOT3-201ENST00000221232 GBP7Q8N8V2 638 aaPredicted RBP15.28■□□□□ 0.04
CNOT3-201ENST00000221232 PTPRN2Q92932 1015 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 TTC17Q96AE7 1141 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 BCO2Q9BYV7 579 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 ASNSD1Q9NWL6 643 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 SMG5Q9UPR3 1016 aaKnown RBP15.28■□□□□ 0.04
CNOT3-201ENST00000221232 HES2Q9Y543 173 aa15.28■□□□□ 0.04
CNOT3-201ENST00000221232 EIF4E1BA6NMX2 242 aaKnown RBP15.27■□□□□ 0.04
CNOT3-201ENST00000221232 PPEF2O14830 753 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 PRPSAP2O60256 369 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 EDF1O60869 148 aaKnown RBP15.27■□□□□ 0.04
CNOT3-201ENST00000221232 LGR5O75473 907 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 MT-ND3P03897 115 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 HMGCRP04035 888 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 TFE3P19532 575 aaPredicted RBP15.27■□□□□ 0.04
CNOT3-201ENST00000221232 ZNF268Q14587 947 aaPredicted RBP15.27■□□□□ 0.04
CNOT3-201ENST00000221232 CA9Q16790 459 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 CCDC142Q17RM4 750 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 PLEKHG4Q58EX7 1191 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 EFHC2Q5JST6 749 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 TDRPQ86YL5 185 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 TTC13Q8NBP0 860 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 CMASQ8NFW8 434 aaPredicted RBP15.27■□□□□ 0.04
CNOT3-201ENST00000221232 RFWD2Q8NHY2 731 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 N4BP2L2Q92802 583 aaPredicted RBP15.27■□□□□ 0.04
CNOT3-201ENST00000221232 ARHGEF3Q9NR81 526 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 IKBKGQ9Y6K9 419 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 LCTP09848 1927 aa15.27■□□□□ 0.04
CNOT3-201ENST00000221232 APOC4-APOC2K7ER74 178 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 APOC2P02655 101 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 SLC8A1P32418 973 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 TMEM132DQ14C87 1099 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 TAF1BQ53T94 588 aaPredicted RBP15.27■□□□□ 0.03
CNOT3-201ENST00000221232 CCDC62Q6P9F0 684 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 MTDHQ86UE4 582 aaKnown RBP15.27■□□□□ 0.03
CNOT3-201ENST00000221232 KIF12Q96FN5 646 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 SERAC1Q96JX3 654 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 APOL6Q9BWW8 343 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 PDZD7Q9H5P4 517 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 SLC24A2Q9UI40 661 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 STARD13Q9Y3M8 1113 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 NUMBLQ9Y6R0 609 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 KAT6AQ92794 2004 aa15.27■□□□□ 0.03
CNOT3-201ENST00000221232 UNC5CO95185 931 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 C22orf31O95567 290 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 PYGBP11216 843 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 GPD1P21695 349 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 RBL1P28749 1068 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 PTPN7P35236 360 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 PMF1Q6P1K2 205 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 PPM1NQ8N819 430 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 CCDC110Q8TBZ0 833 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 AFG1LQ8WV93 481 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 DCAKDQ8WVC6 231 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 GRAMD1AQ96CP6 724 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 FAM111AQ96PZ2 611 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 DPP3Q9NY33 737 aa15.26■□□□□ 0.03
CNOT3-201ENST00000221232 SNX9Q9Y5X1 595 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms