RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 LINC00523Q86TU6 105 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 TBC1D22BQ9NU19 505 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 H3BMM5 538 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 PRODHO43272 600 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 EIF4A1P60842 406 aaKnown RBP15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 GRIK3Q13003 919 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 MAP4K1Q92918 833 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 VPS33AQ96AX1 596 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 MRC2Q9UBG0 1479 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 CYP21A2P08686 494 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 NCAM1P13591 858 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 PTSQ03393 145 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 CDH18Q13634 790 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 SNX17Q15036 470 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 HPS6Q86YV9 775 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 RIBC1Q8N443 379 aaPredicted RBP15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 SAMD3Q8N6K7 520 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 RORBQ92753 470 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 KANSL1LA0AUZ9 987 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 C2CD2LO14523 706 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 HK2P52789 917 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 TSPAN14Q8NG11 270 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 DCAF4Q8WV16 495 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 KLF6Q99612 283 aaPredicted RBP15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 FAM192AQ9GZU8 254 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 ASAP1Q9ULH1 1129 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 NCKAP5LQ9HCH0 1330 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 E7ENQ6 273 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 VPS26AO75436 327 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 PDGFRAP16234 1089 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 PDK1Q15118 436 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 LMBRD2Q68DH5 695 aaPredicted RBP15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 C2orf69Q8N8R5 385 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 KAT2BQ92831 832 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 NDUFA13Q9P0J0 144 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 FEM1BQ9UK73 627 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 BTBD3Q9Y2F9 522 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 ZHX2Q9Y6X8 837 aa15.09■□□□□ 0.01
SPTLC2-201ENST00000216484 GEMIN4P57678 1058 aaKnown RBP15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 RNF44Q7L0R7 432 aa15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 ARID3BQ8IVW6 561 aaPredicted RBP15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 PAK5Q9P286 719 aa15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 ZBTB1Q9Y2K1 713 aa15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 PSMD14O00487 310 aa15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 OR6A2O95222 327 aa15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 FCER1AP12319 257 aa15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 STIP1P31948 543 aaKnown RBP15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 PALB2Q86YC2 1186 aa15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 EIF2AK1Q9BQI3 630 aaKnown RBP15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 LNPEPQ9UIQ6 1025 aa15.08■□□□□ 0.01
SPTLC2-201ENST00000216484 ZBTB49Q6ZSB9 765 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 SEPHS2Q99611 448 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 DCUN1D5Q9BTE7 237 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 VPS33BQ9H267 617 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 CYP4F12Q9HCS2 524 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 USP17L15C9J2P7 530 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 USP17L13C9JLJ4 530 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 USP17L11C9JVI0 530 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 USP17L18D6R9N7 530 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 USP17L22D6RA61 530 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 USP17L17D6RBQ6 530 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 USP17L19D6RCP7 530 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 USP17L20D6RJB6 530 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 ZBTB5O15062 677 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 MYBP10242 640 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 TNNI3P19429 210 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 MAPK1P28482 360 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 USP17L24Q0WX57 530 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 SEL1L3Q68CR1 1132 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 USP17L6PQ6QN14 398 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 SUGP1Q8IWZ8 645 aaKnown RBP15.08■□□□□ 0
SPTLC2-201ENST00000216484 PPCSQ9HAB8 311 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 BAIAP3O94812 1187 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 BMP10O95393 424 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 MAGEA4P43358 317 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 KCTD21Q4G0X4 260 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 UTS2BQ765I0 119 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 SVOPQ8N4V2 548 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 TRPV3Q8NET8 790 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 CATSPER2Q96P56 530 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 STK33Q9BYT3 514 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 EPB41L4BQ9H329 900 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 HEY2Q9UBP5 337 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 ACADLP28330 430 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 SFNP31947 248 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 OLFML1Q6UWY5 402 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 FIG4Q92562 907 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 CCDC126Q96EE4 140 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 SGF29Q96ES7 293 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 BDH2Q9BUT1 245 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 OSGEPL1Q9H4B0 414 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 FGD3Q5JSP0 725 aa15.08■□□□□ 0
SPTLC2-201ENST00000216484 BHLHE41Q9C0J9 482 aaPredicted RBP15.08■□□□□ 0
SPTLC2-201ENST00000216484 TTC26A0AVF1 554 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 USP17L5A8MUK1 530 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 CHL1O00533 1208 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 NUMBP49757 651 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 MZT2BQ6NZ67 158 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 TMEM179Q6ZVK1 233 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 OR2W6PQ8NHA6 318 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms