RNA–Protein interactions for RNA: ENST00000070846.10

PKP2-201, Transcript of plakophilin 2, humanhuman

TSL 1 (best) BASIC

Gene PKP2, Length 4,241 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-201ENST00000070846 ULBP1Q9BZM6 244 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 NXF3Q9H4D5 531 aaKnown RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 CPSF2Q9P2I0 782 aaKnown RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 USP18Q9UMW8 372 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 SIGLEC1Q9BZZ2 1709 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 GTPBP10A4D1E9 387 aaKnown RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 TBC1D3BA6NDS4 549 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 LRRIQ3A6PVS8 624 aaPredicted RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 DIAPH2O60879 1101 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 PHF2O75151 1096 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 SMIM24O75264 130 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 SNHG28P0DPA3 235 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 ACADMP11310 421 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 HDCP19113 662 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 FBXO38Q6PIJ6 1188 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 ETNPPLQ8TBG4 499 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 ATG4AQ8WYN0 398 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 ALG13Q9NP73 1137 aaKnown RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 OSGEPQ9NPF4 335 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 DDX20Q9UHI6 824 aaKnown RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 ZNF214Q9UL59 606 aaPredicted RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 PADI3Q9ULW8 664 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 CLCA2Q9UQC9 943 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 DUSP10Q9Y6W6 482 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 HMGB1P1B2RPK0 211 aaPredicted RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 CTIFO43310 598 aaKnown RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 ANP32DO95626 131 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 USP17L7P0C7H9 530 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 PPM1AP35813 382 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 RGS4P49798 205 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 CCZ1BP86790 482 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 CCZ1P86791 482 aaPredicted RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 GCNT1Q02742 428 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 SFSWAPQ12872 951 aaKnown RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 LAMB3Q13751 1172 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 NAA30Q147X3 362 aaPredicted RBP11.84□□□□□ -0.51
PKP2-201ENST00000070846 LLGL2Q6P1M3 1020 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 TPGS1Q6ZTW0 290 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 DEFB106AQ8N104 65 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 USP38Q8NB14 1042 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 KAT5Q92993 513 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 PDLIM2Q96JY6 352 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 MARCH2Q9P0N8 246 aa11.84□□□□□ -0.51
PKP2-201ENST00000070846 LSM8O95777 96 aaKnown RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 FGBP02675 491 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 POLBP06746 335 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 FGRP09769 529 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 SELPP16109 830 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 PTPN1P18031 435 aaKnown RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 OR1E1P30953 314 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 STIP1P31948 543 aaKnown RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 OR1D2P34982 312 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 TNFSF9P41273 254 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 PPP3CAQ08209 521 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 CCDC149Q6ZUS6 474 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 ZNF571Q7Z3V5 609 aaPredicted RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 TRIM48Q8IWZ4 208 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 DDIASQ8IXT1 998 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 TMEM86AQ8N2M4 240 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 USP13Q92995 863 aaPredicted RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 TRIM55Q9BYV6 548 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 UBXN6Q9BZV1 441 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 CARD9Q9H257 536 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 DCTN4Q9UJW0 460 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 TPX2Q9ULW0 747 aaKnown RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 SLC27A5Q9Y2P5 690 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 E2F8A0AVK6 867 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 F8VP50 259 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 RAMP2O60895 175 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 CXCL14O95715 111 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 PYGLP06737 847 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 BRCC3P46736 316 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 CCL14Q16627 93 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 USP41Q3LFD5 358 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 PHLDB3Q6NSJ2 640 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 HERC6Q8IVU3 1022 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 PDCD7Q8N8D1 485 aaKnown RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 TPCN2Q8NHX9 752 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 CSGALNACT1Q8TDX6 532 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 SMYD3Q9H7B4 428 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 ATP13A1Q9HD20 1204 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 UBP1Q9NZI7 540 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 UXTQ9UBK9 157 aaPredicted RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 SOWAHBA6NEL2 793 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 KPNA3O00505 521 aaPredicted RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 PRPF4O43172 522 aaKnown RBP eCLIP11.83□□□□□ -0.52
PKP2-201ENST00000070846 SPAG7O75391 227 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 LRRC14Q15048 493 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 TSNAXIP1Q2TAA8 658 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 CBWD6Q4V339 395 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 CBWD3Q5JTY5 395 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 CBWD5Q5RIA9 395 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 ABHD15Q6UXT9 468 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 SLC13A5Q86YT5 568 aaPredicted RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 JAMLQ86YT9 394 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 ARHGEF19Q8IW93 802 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 ZBTB10Q96DT7 871 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 FAM84AQ96KN4 292 aa11.83□□□□□ -0.52
PKP2-201ENST00000070846 ELAC2Q9BQ52 826 aaKnown RBP11.83□□□□□ -0.52
PKP2-201ENST00000070846 NT5MQ9NPB1 228 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms