RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 CCDC188H7C350 402 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 OR4Q2P0C623 313 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 HTRA4P83105 476 aaPredicted RBP23.17■■□□□ 1.3
HOXC8-201ENST00000040584 PLCB3Q01970 1234 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 RTP2Q5QGT7 225 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 PLEKHA7Q6IQ23 1121 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 COLGALT1Q8NBJ5 622 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 ZNF564Q8TBZ8 553 aaPredicted RBP23.17■■□□□ 1.3
HOXC8-201ENST00000040584 MYLPFQ96A32 169 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 GDAP1L1Q96MZ0 367 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 VN1R3Q9BXE9 311 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 DUSP16Q9BY84 665 aa23.17■■□□□ 1.3
HOXC8-201ENST00000040584 HEXIM1O94992 359 aaKnown RBP23.16■■□□□ 1.3
HOXC8-201ENST00000040584 GJB6O95452 261 aa23.16■■□□□ 1.3
HOXC8-201ENST00000040584 SETSIPP0DME0 302 aa23.16■■□□□ 1.3
HOXC8-201ENST00000040584 LAG3P18627 525 aa23.16■■□□□ 1.3
HOXC8-201ENST00000040584 MAMLD1Q13495 774 aa23.16■■□□□ 1.3
HOXC8-201ENST00000040584 MRPL58Q14197 206 aaKnown RBP23.16■■□□□ 1.3
HOXC8-201ENST00000040584 DAAM2Q86T65 1068 aa23.16■■□□□ 1.3
HOXC8-201ENST00000040584 HERC6Q8IVU3 1022 aa23.16■■□□□ 1.3
HOXC8-201ENST00000040584 EPB41L5Q9HCM4 733 aa23.16■■□□□ 1.3
HOXC8-201ENST00000040584 EHD2Q9NZN4 543 aa23.16■■□□□ 1.3
HOXC8-201ENST00000040584 SHOX2O60902 331 aaPredicted RBP23.15■■□□□ 1.3
HOXC8-201ENST00000040584 BEST1O76090 585 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 EFEMP2O95967 443 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 CLUL1Q15846 466 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 CTXN3Q4LDR2 81 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 FAM35AQ86V20 835 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 SLC39A11Q8N1S5 342 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 BTBD6Q96KE9 485 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 TTPALQ9BTX7 342 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 RHOBTB2Q9BYZ6 727 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 KRT82Q9NSB4 513 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 SMARCAL1Q9NZC9 954 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 INSL6Q9Y581 213 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 TCRBV5S1A1TA0A578 114 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 E5RJQ4 531 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 KCNK3O14649 394 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 FAM200BP0CF97 657 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 ATP2A2P16615 1042 aaKnown RBP23.15■■□□□ 1.3
HOXC8-201ENST00000040584 NPR3P17342 541 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 GABRB2P47870 512 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 XYLT1Q86Y38 959 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 SLC9A7Q96T83 725 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 SLC4A5Q9BY07 1137 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 TRIM7Q9C029 511 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 ZCWPW1Q9H0M4 648 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 PARVAQ9NVD7 372 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 STRIP2Q9ULQ0 834 aa23.15■■□□□ 1.3
HOXC8-201ENST00000040584 AP1G2O75843 785 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 GABBR2O75899 941 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 GLI1P08151 1106 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 GUCY2DQ02846 1103 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 CUL1Q13616 776 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 PTPROQ16827 1216 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 C11orf63Q6NUN7 778 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 CLEC20AQ6ZU45 233 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 PEX26Q7Z412 305 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 FIBCD1Q8N539 461 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 IPO4Q8TEX9 1081 aaKnown RBP23.14■■□□□ 1.29
HOXC8-201ENST00000040584 KRT12Q99456 494 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 MRPL47Q9HD33 250 aaKnown RBP23.14■■□□□ 1.29
HOXC8-201ENST00000040584 SCINQ9Y6U3 715 aa23.14■■□□□ 1.29
HOXC8-201ENST00000040584 GOLGA8SH3BPF8 625 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 RABGGTBP53611 331 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 CACNA2D1P54289 1103 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 GSCP56915 257 aaPredicted RBP23.13■■□□□ 1.29
HOXC8-201ENST00000040584 MAP3K7CLP57077 242 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 SLC8A3P57103 927 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 MAPRE1Q15691 268 aaKnown RBP23.13■■□□□ 1.29
HOXC8-201ENST00000040584 SLC39A12Q504Y0 691 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 ZNF280DQ6N043 979 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 DNAJC24Q6P3W2 148 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 PRSS55Q6UWB4 352 aaPredicted RBP23.13■■□□□ 1.29
HOXC8-201ENST00000040584 RNF168Q8IYW5 571 aaPredicted RBP23.13■■□□□ 1.29
HOXC8-201ENST00000040584 PHOSPHO2Q8TCD6 241 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 STK32AQ8WU08 396 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 TMEM169Q96HH4 297 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 TMEM30AQ9NV96 361 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 SPG21Q9NZD8 308 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 ANAPC7Q9UJX3 599 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 TMEM110-MUSTN1A8MSY1 372 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 PGRMC1O00264 195 aaKnown RBP23.13■■□□□ 1.29
HOXC8-201ENST00000040584 XPO1O14980 1071 aaKnown RBP23.13■■□□□ 1.29
HOXC8-201ENST00000040584 BDNFP23560 247 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 MESDQ14696 234 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 PPP2R5EQ16537 467 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 USP41Q3LFD5 358 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 CFAP58Q5T655 872 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 RSPO2Q6UXX9 243 aaPredicted RBP23.13■■□□□ 1.29
HOXC8-201ENST00000040584 LRRC31Q6UY01 552 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 TMEM110Q86TL2 294 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 NT5DC3Q86UY8 548 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 PIGZQ86VD9 579 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 RASGEF1CQ8N431 466 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 C3orf20Q8ND61 904 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 KCNK16Q96T55 309 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 RAD9AQ99638 391 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 SMOQ99835 787 aa23.13■■□□□ 1.29
HOXC8-201ENST00000040584 MTIF3Q9H2K0 278 aaKnown RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms