RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Ddx24Q9ESV0 857 aaKnown RBP22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Psmg1Q9JK23 289 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Nme7Q9QXL8 395 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 TfgQ9Z1A1 397 aa22.21■■□□□ 1.15
Ccdc88a-202ENSMUST00000109477 Osbpl9A2A8Z1 736 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 BC049352E9Q2Z6 85 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Yap1P46938 488 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Anxa5P48036 319 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Gdpd4Q3TT99 632 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Dab2ipQ3UHC7 1189 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Anks6Q6GQX6 883 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 RbfaQ6P3B9 350 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Gm5622Q810Q0 167 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Slfn5Q8CBA2 884 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Eif2b5Q8CHW4 717 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 B3galt6Q91Z92 325 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Smc1aQ9CU62 1233 aaKnown RBP22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Timp4Q9JHB3 224 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Tspan3Q9QY33 253 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Bpifb9bA2AJD1 591 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 R3hdm1E9Q9Q2 1135 aaKnown RBP22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Dmp1O55188 503 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Mup5P11591 180 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Fcer2P20693 331 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 CtswP56203 371 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 YwhahP68510 246 aaKnown RBP22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 MylpfP97457 169 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Tmem45aQ60774 273 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Bpifb9aQ80XI7 591 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Znf473Q8BI67 892 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Pwp2Q8BU03 919 aaKnown RBP22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Kif2bQ8C0N1 668 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 AA792892Q8C6S1 278 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Rassf9Q8K342 435 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Ttc33Q9D6K7 262 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Rexo2Q9D8S4 237 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Oxct2bQ9ESL0 520 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Oxct2aQ9JJN4 520 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Cetn2Q9R1K9 172 aa22.2■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Samd1D3YXK1 519 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 9330159F19RikD3Z623 648 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 DgkdE9PUQ8 1220 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 DffaO54786 331 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 HpdP49429 393 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Csf2raQ00941 388 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 ZufspQ3T9Z9 577 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Pik3r6Q3U6Q4 756 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Smarcd1Q61466 515 aaKnown RBP22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Tatdn1Q6P8M1 295 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Ccdc117Q6PB51 277 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Clec1aQ8BWY2 269 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Fsd1lQ8BYN5 507 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Rsad2Q8CBB9 362 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Tada2aQ8CHV6 443 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Hip1Q8VD75 1029 aaKnown RBP22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Epn3Q91W69 636 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Pip4k2cQ91XU3 421 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Anxa9Q9JHQ0 345 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 GabrqQ9JLF1 638 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Ptgdr2Q9Z2J6 382 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Cep350E9Q309 3095 aa22.19■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Olfr731F8VQB9 326 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Gm7694J3QNH8 270 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 DcxO88809 366 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 ProcP33587 460 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Sh3bp1P55194 680 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Gp1bbP56400 206 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 RalaP63321 206 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Frg1P97376 258 aaKnown RBP22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Adcy6Q01341 1165 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Gbp1Q01514 589 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Pick1Q62083 416 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Tspyl5Q69ZB3 406 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Jade3Q6IE82 823 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Trim6Q8BGE7 488 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Ankrd52Q8BTI7 1076 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Ldhal6bQ8BVP2 382 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Tbc1d22aQ8R5A6 516 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Wdr98Q8VC42 657 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Olfr356Q8VFP5 315 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Snx9Q91VH2 595 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Dr1Q91WV0 176 aa22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Synpo2Q91YE8 1087 aaKnown RBP22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Gys1Q9Z1E4 738 aaKnown RBP22.18■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Gm5485A0A1D5RM98 91 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 AlpiF8VPQ6 554 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 PrkchP23298 683 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Nrp1P97333 923 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Mapre1Q61166 268 aaKnown RBP22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Six1Q62231 284 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 PtprjQ64455 1238 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Rnf168Q80XJ2 565 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Slitrk1Q810C1 696 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Rbm34Q8C5L7 375 aaKnown RBP22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Il36gQ8R460 164 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Pth2rQ91V95 546 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 AticQ9CWJ9 592 aaKnown RBP22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Spatc1lQ9D9W0 342 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 Lonp2Q9DBN5 852 aa22.17■■□□□ 1.14
Ccdc88a-202ENSMUST00000109477 IqccA2ADZ8 418 aa22.17■■□□□ 1.14
Retrieved 100 of 22,080 RNA–protein pairs in 16.6 ms