RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Esrp1Q3US41 680 aaKnown RBP10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 TwistnbQ78WZ7 330 aaKnown RBP10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Mxd3Q80US8 206 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 SgtaQ8BJU0 315 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rell1Q8K2J7 272 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ttll10A4Q9F3 704 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Surf2P09926 257 aaKnown RBP10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 MagohP61327 146 aaKnown RBP10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Skap2Q3UND0 358 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ppp1r13lQ5I1X5 824 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Svs6Q64356 99 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hist1h2aaQ8CGP4 129 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Smyd2Q8R5A0 433 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ndufs1Q91VD9 727 aaKnown RBP10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Nphs2Q91X05 385 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 MagohbQ9CQL1 146 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Mageb16Q9CWV4 363 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rnf103Q9R1W3 683 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Reps1O54916 795 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tgm2P21981 686 aaKnown RBP10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Bace1P56818 501 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Carmil2Q3V3V9 1296 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Pla2g4dQ50L43 825 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 PkdccQ5RJI4 492 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rnf139Q7TMV1 668 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Atp2c1Q80XR2 918 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Gm42417Q8K1D0 126 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Spats2lQ91WJ7 558 aaKnown RBP10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tbk1Q9WUN2 729 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Znf711A2ANX9 761 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Dab1P97318 588 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ctnnb1Q02248 781 aaKnown RBP10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Col6a1Q04857 1025 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Cyp4x1Q6A152 507 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rbm12b1Q80YR9 836 aaKnown RBP10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Uba3Q8C878 462 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Setd6Q9CWY3 473 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Robo2Q7TPD3 1470 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ifi213D3Z5G0 586 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Polr2lP62876 67 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Klhl24Q8BRG6 600 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ppp2r3dQ9Z176 491 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Kcnq2Q9Z351 759 aa10.77□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Dcpp2E9PYC2 171 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Dcpp1L7N1X9 171 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Mageb5Q14AN0 366 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tespa1Q3U132 458 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 4933427I04RikQ3V053 235 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Oca2Q62052 833 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ccdc184Q8BMK5 191 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Mxra8Q9DBV4 442 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Gprc5dQ9JIL6 344 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Zscan12Q9Z1D7 501 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Pitpnm2Q6ZPQ6 1335 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Dip2aQ8BWT5 1523 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Xlr5bA2BI50 236 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Stag2O35638 1231 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tshz1Q5DTH5 1084 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Scn3bQ8BHK2 215 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tmem134Q8R0J4 195 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Prrg2Q8R182 198 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Zdhhc12Q8VC90 267 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 PrameQ9D4Z5 464 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Fam162aQ9D6U8 155 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Fip1l1Q9D824 581 aaKnown RBP10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 DgkeQ9R1C6 564 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Nme9A0A1L1SUL6 329 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rsrc2A2RTL5 376 aaKnown RBP10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Gm2832F7AEC7 200 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Hes2O54792 157 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Lrrc8bQ5DU41 803 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tcf4Q60722 670 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 PtprcapQ64697 197 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Taf1dQ9D4V4 322 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Eps8Q08509 821 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Trim45Q6PFY8 580 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rccd1Q8BTU7 377 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Rhpn2Q8BWR8 686 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Chst15Q91XQ5 561 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Snx29Q9D3S3 818 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ccr1P51675 355 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Glis1Q8K1M4 789 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 MceeQ9D1I5 178 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ccdc81Q9D5W4 654 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 BcamQ9R069 622 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Angpt2O35608 496 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Aldh3a1P47739 453 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Ccna2P51943 422 aaKnown RBP10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Smtnl2Q8CI12 456 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tcp11l2Q8K1H7 517 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Mov10l1Q99MV5 1187 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Eif2ak3Q9Z2B5 1114 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 UmpsP13439 481 aaKnown RBP10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Il4rP16382 810 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Wdr41Q3UDP0 460 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Tdrd5Q5VCS6 1040 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Exoc3l4Q6DIA2 721 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Vmn2r43Q80Z08 845 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Zfyve1Q810J8 777 aa10.76□□□□□ -0.69
Scn9a-201ENSMUST00000100063 Atg4cQ811C2 458 aa10.76□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms