RNA–Protein interactions for RNA: ENSMUST00000044166.8

Cdc40-201, Transcript of Pre-mRNA-processing factor 17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cdc40, Length 3,534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40-201ENSMUST00000044166 Rab17P35292 214 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Kcnj12P52187 427 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Als2clQ60I26 952 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ubxn7Q6P5G6 467 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Vmn2r26Q6TAC4 855 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tas2r109Q7M707 316 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Sestd1Q80UK0 696 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tubgcp5Q8BKN5 1024 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Elmo3Q8BYZ7 720 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 TdrpQ8C5P7 182 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Bst2Q8R2Q8 172 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Nup85Q8R480 656 aaKnown RBP8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Atxn7Q8R4I1 867 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ugp2Q91ZJ5 508 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 MtrexQ9CZU3 1040 aaKnown RBP8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Sun1Q9D666 913 aaKnown RBP8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ptpn4Q9WU22 926 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Anapc7Q9WVM3 565 aa8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Myo5aQ99104 1853 aaKnown RBP8.61□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Slc6a16A0A1L1SR47 742 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 C87977A2A958 498 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tldc2A2ACG1 198 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Sh2d4bA6X942 431 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Nccrp1G3X9C2 266 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Gm10250G3X9L6 160 aaKnown RBP8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Gm379J3QQ19 296 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Capn6O35646 641 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Pold2O35654 469 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 AdssP46664 456 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Zbtb14Q08376 449 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Lmntd2Q0VET5 664 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Vps51Q3UVL4 782 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Gm13103Q4VAD2 491 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ifnl2Q4VK74 193 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Hesx1Q61658 185 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 CrkQ64010 304 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Oscp1Q8BHW2 379 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Znf76Q8BMU0 568 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Lsm14aQ8K2F8 462 aaKnown RBP8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Gstm4Q8R5I6 218 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Pcdhb12Q91Y07 789 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 CatsperzQ9CQP8 194 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Borcs6Q9D6W8 360 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Atp5hQ9DCX2 161 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 IcmtQ9EQK7 283 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Sfmbt1Q9JMD1 863 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Sgk1Q9WVC6 431 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Smchd1Q6P5D8 2007 aaKnown RBP8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Fyb2A2A995 729 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 MttpO08601 894 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tnfrsf18O35714 228 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 ItgalP24063 1163 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Ccnd1P25322 295 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Sstr1P30873 391 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Arl4cP61208 192 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 VcpQ01853 806 aaKnown RBP8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Cd300lgQ1ERP8 331 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Hddc2Q3SXD3 199 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Oog4Q4G0C7 502 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 RasefQ5RI75 627 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Grik1Q60934 836 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Senp6Q6P7W0 1132 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Olfr301Q7TS04 311 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Hsfy2Q80Y37 392 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Znf365Q8BG89 408 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Slc39a13Q8BZH0 361 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Mrgprx1Q8CIP3 322 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 4921524L21RikQ9D5T2 438 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Mrpl2Q9D773 306 aaKnown RBP8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Usp29Q9ES63 869 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 XkQ9QXY7 446 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Sh2d3cQ9QZS8 854 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Mettl1Q9Z120 268 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Arhgef26D3YYY8 869 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Pcdh9F8VPK8 1237 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Banf1O54962 89 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Dnase1l3O55070 310 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Vav1P27870 845 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Mfsd14aP70187 490 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Znf112Q0VAW7 879 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Trim72Q1XH17 477 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Pbxip1Q3TVI8 727 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Grm6Q5NCH9 871 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Slc30a1Q60738 503 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Dtx3Q80V91 347 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Slitrk1Q810C1 696 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Znf276Q8CE64 614 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Slc51aQ8R000 340 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Slc18a1Q8R090 521 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Znf426Q8R1D1 550 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Pofut2Q8VHI3 429 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Sec16bQ91XT4 1051 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Rpn1Q91YQ5 608 aaKnown RBP8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Abtb1Q99LJ2 478 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Pard3bQ9CSB4 1203 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 PrccQ9EQC8 491 aaKnown RBP8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Rilpl1Q9JJC6 406 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Tk2Q9R088 270 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Robo3Q9Z2I4 1366 aa8.6□□□□□ -1.03
Cdc40-201ENSMUST00000044166 Gm12666A2AMD0 254 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 22,080 RNA–protein pairs in 30.9 ms