RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Mfsd4b4J3QNS5 503 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Hmgxb4Q80Y32 594 aaKnown RBP17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Plekhm3Q8BM47 761 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Plagl2Q925T4 496 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Cyp4f14Q9EP75 524 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Smok2bQ9QYZ3 484 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Smok2aQ9QYZ6 504 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ptpn4Q9WU22 926 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gp1bbP56400 206 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rps6P62754 249 aaKnown RBP17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ddx17Q501J6 650 aaKnown RBP17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Znf569Q80W31 679 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 ZwilchQ8R060 589 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gtse1Q8R080 741 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 CygbQ9CX80 190 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Hspa12bQ9CZJ2 685 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Nol3Q9D1X0 220 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Atp8b4A2ANX3 1194 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Nmt2O70311 529 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 PolP11369 1281 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Fkbp1aP26883 108 aaKnown RBP17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Prmt3Q922H1 532 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ppp1r3aQ99MR9 1089 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 CraddO88843 199 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rnf219Q8K2Y0 722 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Myoz2Q9JJW5 264 aa17.13■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Numa1E9Q7G0 2094 aaKnown RBP17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Dennd5bA2RSQ0 1274 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gm8257E9Q8R3 264 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Man1a2P39098 641 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 CamkvQ3UHL1 512 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rbl2Q64700 1135 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ciapin1Q8WTY4 309 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rsl24d1Q99L28 163 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Surf2P09926 257 aaKnown RBP17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Them6Q80ZW2 207 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Doc2gQ9ESN1 387 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Cnga3Q9JJZ8 631 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ccne2Q9Z238 404 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Zc3h13E9Q784 1729 aaKnown RBP17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Il17raQ60943 864 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 QkiQ9QYS9 341 aaKnown RBP17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tekt5G5E8A8 557 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Shoc2O88520 582 aaKnown RBP17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tap1P21958 724 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 NlnQ91YP2 704 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Trpc7Q9WVC5 862 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Kif28pD3YXS5 1028 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Hmox2O70252 315 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Il1aP01582 270 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Akt1P31750 480 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 A1cfQ5YD48 595 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Mxd3Q80US8 206 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pus3Q9JI38 481 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ulk2Q9QY01 1037 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Hebp1Q9R257 190 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Zfyve16Q80U44 1528 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Mms22lB1AUR6 1238 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 AurkcO88445 282 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tcf4Q60722 670 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Dyrk4Q8BI55 632 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pgm3Q9CYR6 542 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Sertad1Q9JL10 236 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Dnal1Q05A62 190 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 DaglbQ91WC9 669 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gtf2h1Q9DBA9 547 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Extl2Q9ES89 330 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ssc5dQ8BV57 1371 aa17.12■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ica1lQ3TY65 431 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Lrrc8bQ5DU41 803 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Atg16l2Q6KAU8 623 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rps6ka6Q7TPS0 764 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 AdigQ8R400 80 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Tmed5Q9CXE7 229 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Uchl3Q9JKB1 230 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ass1P16460 412 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Naa20P61600 178 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rit2P70425 217 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gpd1lQ3ULJ0 351 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Nutm2Q3V0C3 733 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Rnf139Q7TMV1 668 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Nlrp4bQ8C6J9 863 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pcyox1lQ8C7K6 495 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 PiguQ8K358 434 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 OscarQ8VBT3 265 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Smim11aQ99J19 55 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ankef1Q9D2J7 775 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 FignQ9ERZ6 759 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gm5799E9Q2M1 201 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ctnnd2O35927 1247 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Adrbk2Q3UYH7 688 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pick1Q62083 416 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Gstt1Q64471 240 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Pex5lQ8C437 567 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Unc5bQ8K1S3 945 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ptpn23Q6PB44 1692 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Ism1A2ATD1 454 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Grem2O88273 168 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Skap2Q3UND0 358 aa17.11■□□□□ 0.33
Ccdc88a-201ENSMUST00000040182 Mfn2Q80U63 757 aa17.11■□□□□ 0.33
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms