RNA–Protein interactions for RNA: ENSMUST00000028580.11

Ccdc34-201, Transcript of Coiled-coil domain-containing protein 34, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc34, Length 2,070 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc34-201ENSMUST00000028580 Slc17a7Q3TXX4 560 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Nlrc4Q3UP24 1024 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Cacna2d2Q6PHS9 1154 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Klhl17Q6TDP3 640 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Gabbr2Q80T41 940 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 Vps37bQ8R0J7 285 aa20.58■□□□□ 0.89
Ccdc34-201ENSMUST00000028580 En2P09066 324 aa20.58■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Lrrn4P59383 733 aa20.58■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Lrrc14bQ3UJB3 510 aa20.58■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Elf1Q60775 612 aa20.58■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Rassf6Q80UQ2 353 aa20.58■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Tspan17Q9D7W4 270 aa20.58■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Asb1Q9WV74 336 aa20.58■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Pcdh15Q99PJ1 1943 aa20.58■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Gm15262A0A140LIQ5 728 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Vmn2r104E9Q2J5 860 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Vav1P27870 845 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 VdrP48281 422 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ccdc138Q0VF22 680 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Trim80Q3V061 624 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Hif1aQ61221 836 aaKnown RBP20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Senp5Q6NXL6 749 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Pum3Q8BKS9 647 aaKnown RBP20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Lrrc19Q8BZT5 364 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Uba3Q8C878 462 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Znf467Q8JZL0 594 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Q8VDP2 222 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Pgm1Q9D0F9 562 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ropn1Q9ESG2 212 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Tnfrsf10bQ9QZM4 381 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Dnajc12Q9R022 198 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Hao1Q9WU19 370 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Celf5D3Z4T1 395 aaKnown RBP20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Soat2O88908 525 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 MycnP03966 462 aaKnown RBP20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Chrna1P04756 457 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Gnl1P36916 607 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Shmt1P50431 478 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Pld5Q3UNN8 536 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Tpp2Q64514 1262 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Q6GQV0 436 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ssxb5Q6XAS2 159 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ddhd1Q80YA3 547 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Spata20Q80YT5 790 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Znf76Q8BMU0 568 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Zbtb44Q8R0A2 453 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Zdhhc3Q8R173 299 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Zcchc18Q8VD24 393 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Snrnp25Q8VIK1 123 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ogfod2Q9CQ04 349 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Mphosph6Q9D1Q1 161 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Sun1Q9D666 913 aaKnown RBP20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Subh2bvQ9D9Z7 123 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Piwil1Q9JMB7 862 aa20.57■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Gjd2O54851 321 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Msx3P70354 204 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Rasgrf2P70392 1189 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Mrgprx2Q3UG50 352 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Gstt2Q61133 244 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Trnp1Q80ZI1 223 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Bmp3Q8BHE5 468 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ccdc68Q8BVC4 333 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Pcdhb6Q91XZ4 772 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 NelfcdQ922L6 591 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Atad3Q925I1 591 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Rpa3Q9CQ71 121 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Chchd3Q9CRB9 227 aaKnown RBP20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Copg2Q9QXK3 871 aa20.56■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Kcng2F7A6P6 480 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Nek2O35942 443 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Art2bO35975 289 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Scp2P32020 547 aaKnown RBP20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Dynlt1P51807 113 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Arf4P61750 180 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Npas2P97460 816 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ubxn2bQ0KL01 331 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Otud5Q3U2S4 566 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Icam5Q60625 917 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ecm1Q61508 559 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Fndc3bQ6NWW9 1207 aaKnown RBP20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Stambpl1Q76N33 436 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ankzf1Q80UU1 748 aaKnown RBP20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Znf598Q80YR4 908 aaKnown RBP20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Rhpn2Q8BWR8 686 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ero1bQ8R2E9 467 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Wdr98Q8VC42 657 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 TgdsQ8VDR7 355 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Ddx1Q91VR5 740 aaKnown RBP20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Tas1r1Q99PG6 842 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 MceeQ9D1I5 178 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 MrgbpQ9DAT2 204 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 PodxlQ9R0M4 503 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Cntnap5aQ0V8T9 1304 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Thsd7bQ6P4U0 1607 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 SftpbP50405 377 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 InhbaQ04998 424 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Zbtb48Q1H9T6 681 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Arhgap45Q3TBD2 1116 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 Traf3Q60803 567 aa20.55■□□□□ 0.88
Ccdc34-201ENSMUST00000028580 RetsatQ64FW2 609 aa20.55■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 27 ms