RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Gm28490A0A087WRT9 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm21294A0A087WS79 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm20824A0A087WS97 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm21996A0A087WSS9 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm28870A0A0A6YW38 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm29866A0A0A6YX04 222 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Bpifb9bA2AJD1 591 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Oip5A2AQ14 241 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pcdh9F8VPK8 1237 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Vmn2r1O70410 912 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 ZbbxQ0P5X5 716 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ankmy2Q3TPE9 440 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fam8a1Q3URQ4 399 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Usp13Q5BKP2 858 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Adad1Q5SUE7 619 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tcf4Q60722 670 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Bpifb9aQ80XI7 591 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm21627Q810R0 219 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Smarcal1Q8BJL0 910 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nsl1Q8K305 281 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tti1Q91V83 1085 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pcdha5Q91Y15 934 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Vta1Q9CR26 309 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ccdc81Q9D5W4 654 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gtf3c6Q9D8P7 227 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Dcaf6Q9DC22 876 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Lrriq1Q0P5X1 1673 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm8267E9Q207 261 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 R3hdm1E9Q9Q2 1135 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Vmn2r4K7N784 913 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Vmn2r31L7N1Z4 861 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Arhgap45Q3TBD2 1116 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ctdnep1Q3TP92 244 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gpd1lQ3ULJ0 351 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Kpna1Q60960 538 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rbl2Q64700 1135 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Myl12aQ6ZWQ9 172 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ttc24Q8BYG0 334 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Arhgap25Q8BYW1 648 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pex5lQ8C437 567 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tbc1d13Q8R3D1 400 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Satl1Q9D5N8 744 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 PpihQ9D868 188 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nusap1Q9ERH4 427 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Nek6Q9ES70 313 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Wdr12Q9JJA4 423 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 GabrqQ9JLF1 638 aa9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 PnkpQ9JLV6 522 aaKnown RBP9.47□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Usp54Q8BL06 1588 aaKnown RBP9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gm8237E9Q257 205 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Myl4P09541 193 aaKnown RBP9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Pabpc1P29341 636 aaKnown RBP9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Atxn7l3bQ3UD01 97 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 McuQ3UMR5 350 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Otop3Q80UF9 577 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Map10Q8BJS7 891 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Sfr1Q8BP27 319 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zfp398Q8BV16 643 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zc3h6Q8BYK8 1177 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 TgdsQ8VDR7 355 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 IrgqQ8VIM9 583 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Fubp1Q91WJ8 651 aaKnown RBP9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rxfp2Q91ZZ5 737 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Gins4Q99LZ3 223 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Sike1Q9CPR7 207 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Mrps15Q9DC71 258 aaKnown RBP9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Skp1Q9WTX5 163 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Zbtb12Q9Z150 459 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 PrkceP16054 737 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Epb41P48193 858 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 LxnP70202 222 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Cyp2c29Q64458 490 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Teddm1aQ810U2 305 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Spice1Q8C804 860 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Smyd2Q8R5A0 433 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Tmco1Q921L3 188 aaKnown RBP9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Rab27aQ9ERI2 221 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ulk2Q9QY01 1037 aa9.46□□□□□ -0.89
Ccdc47-201ENSMUST00000002043 Ppp1r36D3Z0R2 411 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Gm5415E9PXF3 478 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Vmn2r7E9PYL5 915 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Vmn2r38G3UYA8 861 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Vmn2r3H3BJ88 915 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Vmn2r6H3BK29 913 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Spin2fJ3QPU0 254 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Vmn2r33K7N705 861 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Vmn2r44L7N2E1 861 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Adam15O88839 864 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Alkbh1P0CB42 389 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nedd1P33215 660 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 1700061G19RikQ08EE8 705 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tmem109Q3UBX0 243 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Nab1Q61122 486 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Ssxb5Q6XAS2 159 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Kcnf1Q7TSH7 493 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Btnl1Q7TST0 509 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Sept9Q80UG5 583 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Srp68Q8BMA6 625 aaKnown RBP9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Tspan14Q8QZY6 270 aa9.46□□□□□ -0.9
Ccdc47-201ENSMUST00000002043 Rbmx2Q8R0F5 326 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 40.2 ms