RNA–Protein interactions for RNA: YPR110C

RPC40, Transcript of RNA polymerase subunit AC40, yeastyeast

Gene RPC40, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPC40YPR110C YLR146W-AQ2V2P1 62 aa1.49□□□□□ -2.17
RPC40YPR110C YGL194C-AQ2V2P6 80 aa1.49□□□□□ -2.17
RPC40YPR110C YMR105W-AQ8TGS8 64 aa1.49□□□□□ -2.17
RPC40YPR110C PRP8P33334 2413 aaKnown RBP1.49□□□□□ -2.17
RPC40YPR110C GCN1P33892 2672 aaKnown RBP1.49□□□□□ -2.17
RPC40YPR110C MRS4P23500 304 aa1.48□□□□□ -2.17
RPC40YPR110C YHR138CP38841 114 aaPredicted RBP1.48□□□□□ -2.17
RPC40YPR110C GPI2P46961 280 aa1.48□□□□□ -2.17
RPC40YPR110C YGR039WP53225 103 aa1.48□□□□□ -2.17
RPC40YPR110C HHO1P53551 258 aa1.48□□□□□ -2.17
RPC40YPR110C YMR090WQ04304 227 aaKnown RBP1.48□□□□□ -2.17
RPC40YPR110C FCF2Q12035 217 aaPredicted RBP1.48□□□□□ -2.17
RPC40YPR110C RTR2Q12378 196 aa1.48□□□□□ -2.17
RPC40YPR110C YOS1Q3E834 85 aa1.48□□□□□ -2.17
RPC40YPR110C Q0297Q9ZZV8 51 aa1.48□□□□□ -2.17
RPC40YPR110C BPH1P25356 2167 aa1.48□□□□□ -2.17
RPC40YPR110C MEC1P38111 2368 aa1.48□□□□□ -2.17
RPC40YPR110C ROX3P25046 220 aa1.47□□□□□ -2.17
RPC40YPR110C SRP21P32342 167 aa1.47□□□□□ -2.17
RPC40YPR110C EMP24P32803 203 aaKnown RBP1.47□□□□□ -2.17
RPC40YPR110C GCV3P39726 170 aaPredicted RBP1.47□□□□□ -2.17
RPC40YPR110C YEA6P39953 335 aa1.47□□□□□ -2.17
RPC40YPR110C YEL067CP39978 195 aa1.47□□□□□ -2.17
RPC40YPR110C YIR020CP40575 100 aa1.47□□□□□ -2.17
RPC40YPR110C EST3Q03096 181 aa1.47□□□□□ -2.17
RPC40YPR110C YMR082CQ04276 118 aa1.47□□□□□ -2.17
RPC40YPR110C CNL1Q06333 122 aa1.47□□□□□ -2.17
RPC40YPR110C FRQ1Q06389 190 aa1.47□□□□□ -2.17
RPC40YPR110C COA3Q3E7B2 85 aa1.47□□□□□ -2.17
RPC40YPR110C COA2Q3E823 68 aa1.47□□□□□ -2.17
RPC40YPR110C TEL1P38110 2787 aa1.47□□□□□ -2.17
RPC40YPR110C FMP49A0A023PZB3 126 aa1.46□□□□□ -2.18
RPC40YPR110C DDR48P18899 430 aaKnown RBP1.46□□□□□ -2.18
RPC40YPR110C YCL042WP25572 119 aa1.46□□□□□ -2.18
RPC40YPR110C AHT1P29589 182 aa1.46□□□□□ -2.18
RPC40YPR110C MRP49P32388 137 aa1.46□□□□□ -2.18
RPC40YPR110C UGX2P32772 223 aa1.46□□□□□ -2.18
RPC40YPR110C RPL14AP36105 138 aaKnown RBP1.46□□□□□ -2.18
RPC40YPR110C SHB17P36136 271 aaKnown RBP1.46□□□□□ -2.18
RPC40YPR110C ECM31P38122 312 aa1.46□□□□□ -2.18
RPC40YPR110C RPL14BP38754 138 aaKnown RBP1.46□□□□□ -2.18
RPC40YPR110C EMC5P40540 141 aa1.46□□□□□ -2.18
RPC40YPR110C POC4Q12245 148 aaPredicted RBP1.46□□□□□ -2.18
RPC40YPR110C ATP14Q12349 124 aa1.46□□□□□ -2.18
RPC40YPR110C YGL258W-AQ3E740 77 aa1.46□□□□□ -2.18
RPC40YPR110C SLO1Q3E784 85 aa1.46□□□□□ -2.18
RPC40YPR110C TAR1Q8TGM6 124 aa1.46□□□□□ -2.18
RPC40YPR110C YHR213W-AQ8TGT4 77 aa1.46□□□□□ -2.18
RPC40YPR110C RPS25BP0C0T4 108 aaKnown RBP1.45□□□□□ -2.18
RPC40YPR110C HSP12P22943 109 aaKnown RBP1.45□□□□□ -2.18
RPC40YPR110C YGR269WP40326 108 aa1.45□□□□□ -2.18
RPC40YPR110C SNN1P48232 102 aa1.45□□□□□ -2.18
RPC40YPR110C YCL001W-AP87012 153 aa1.45□□□□□ -2.18
RPC40YPR110C LIP1Q03579 150 aa1.45□□□□□ -2.18
RPC40YPR110C SDH7Q04401 133 aa1.45□□□□□ -2.18
RPC40YPR110C FCY1Q12178 158 aa1.45□□□□□ -2.18
RPC40YPR110C COX19Q3E731 98 aa1.45□□□□□ -2.18
RPC40YPR110C RPS25AQ3E792 108 aaPredicted RBP1.45□□□□□ -2.18
RPC40YPR110C VMA9Q3E7B6 73 aa1.45□□□□□ -2.18
RPC40YPR110C SRB6P32570 121 aa1.44□□□□□ -2.18
RPC40YPR110C YKR070WP36151 352 aaKnown RBP1.44□□□□□ -2.18
RPC40YPR110C YBL071CP38185 102 aa1.44□□□□□ -2.18
RPC40YPR110C YBR292CP38357 123 aa1.44□□□□□ -2.18
RPC40YPR110C YPT31P38555 223 aaKnown RBP1.44□□□□□ -2.18
RPC40YPR110C LST8P41318 303 aa1.44□□□□□ -2.18
RPC40YPR110C SFT1P43682 97 aa1.44□□□□□ -2.18
RPC40YPR110C TMA23Q03525 211 aa1.44□□□□□ -2.18
RPC40YPR110C YML079WQ03629 201 aa1.44□□□□□ -2.18
RPC40YPR110C YMR007WQ03675 126 aa1.44□□□□□ -2.18
RPC40YPR110C YNL277W-AQ3E7Z0 62 aa1.44□□□□□ -2.18
RPC40YPR110C CCW14O13547 238 aa1.43□□□□□ -2.18
RPC40YPR110C PAU1P0CE88 120 aa1.43□□□□□ -2.18
RPC40YPR110C PAU14P0CE89 120 aa1.43□□□□□ -2.18
RPC40YPR110C PAU6P0CE90 120 aa1.43□□□□□ -2.18
RPC40YPR110C PAU18P0CE91 120 aa1.43□□□□□ -2.18
RPC40YPR110C PAU8P0CE92 120 aa1.43□□□□□ -2.18
RPC40YPR110C PAU11P0CE93 120 aa1.43□□□□□ -2.18
RPC40YPR110C YHR212W-AP0CX91 67 aa1.43□□□□□ -2.18
RPC40YPR110C QCR9P22289 66 aa1.43□□□□□ -2.18
RPC40YPR110C MRPL38P35996 138 aaPredicted RBP1.43□□□□□ -2.18
RPC40YPR110C PAU13P38725 120 aa1.43□□□□□ -2.18
RPC40YPR110C MIC27P50945 234 aa1.43□□□□□ -2.18
RPC40YPR110C PAU4P53427 120 aa1.43□□□□□ -2.18
RPC40YPR110C PAU10Q03050 120 aa1.43□□□□□ -2.18
RPC40YPR110C AVO2Q04749 426 aa1.43□□□□□ -2.18
RPC40YPR110C YDL241WQ07738 123 aa1.43□□□□□ -2.18
RPC40YPR110C PAU20Q08322 120 aa1.43□□□□□ -2.18
RPC40YPR110C YOR097CQ12274 175 aaPredicted RBP1.43□□□□□ -2.18
RPC40YPR110C PAU9Q3E770 120 aa1.43□□□□□ -2.18
RPC40YPR110C PCC1Q3E833 88 aa1.43□□□□□ -2.18
RPC40YPR110C URA2P07259 2214 aaKnown RBP1.42□□□□□ -2.18
RPC40YPR110C INO4P13902 151 aa1.42□□□□□ -2.18
RPC40YPR110C FPR2P32472 135 aa1.42□□□□□ -2.18
RPC40YPR110C SFT2P38166 215 aa1.42□□□□□ -2.18
RPC40YPR110C SNU13P39990 126 aaKnown RBP1.42□□□□□ -2.18
RPC40YPR110C RUB1Q03919 77 aa1.42□□□□□ -2.18
RPC40YPR110C TVP18Q04767 167 aa1.42□□□□□ -2.18
RPC40YPR110C HOR7Q05827 59 aa1.42□□□□□ -2.18
RPC40YPR110C YPR203WQ08994 102 aa1.42□□□□□ -2.18
RPC40YPR110C YLR118CQ12354 227 aa1.42□□□□□ -2.18
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms