RNA–Protein interactions for RNA: YOR269W

PAC1, Transcript of Involved in nuclear migration, part of the dynein/dynactin pathway, yeast

Gene PAC1, Length 1,485 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAC1	YOR269W	LST8	P41318	303 aa		0.38	□□□□□ -2.35
PAC1	YOR269W	NSE4	P43124	402 aa		0.38	□□□□□ -2.35
PAC1	YOR269W	LSM1	P47017	172 aa	Known RBP	0.38	□□□□□ -2.35
PAC1	YOR269W	VMA10	P48836	114 aa	Known RBP	0.38	□□□□□ -2.35
PAC1	YOR269W	SBH1	P52870	82 aa		0.38	□□□□□ -2.35
PAC1	YOR269W	ORM1	P53224	222 aa		0.38	□□□□□ -2.35
PAC1	YOR269W	YDR210W	Q03482	75 aa		0.38	□□□□□ -2.35
PAC1	YOR269W	LIP1	Q03579	150 aa		0.38	□□□□□ -2.35
PAC1	YOR269W	YML079W	Q03629	201 aa		0.38	□□□□□ -2.35
PAC1	YOR269W	RRP17	Q04031	235 aa	Predicted RBP	0.38	□□□□□ -2.35
PAC1	YOR269W	ATG41	Q12048	136 aa		0.38	□□□□□ -2.35
PAC1	YOR269W	YGR240C-A	Q3E786	66 aa		0.38	□□□□□ -2.35
PAC1	YOR269W	DDP1	Q99321	188 aa	Known RBP	0.38	□□□□□ -2.35
PAC1	YOR269W	PET20	Q99373	253 aa		0.38	□□□□□ -2.35
PAC1	YOR269W	PET54	P10834	293 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	INO4	P13902	151 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	PHO13	P19881	312 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	UBC8	P28263	218 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	AHT1	P29589	182 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	ETR1	P38071	380 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	CSH1	P38287	376 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	SLM6	P38343	150 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	HTD2	P38790	280 aa	Known RBP	0.37	□□□□□ -2.35
PAC1	YOR269W	IPI1	P38803	334 aa	Predicted RBP	0.37	□□□□□ -2.35
PAC1	YOR269W	YER181C	P40097	107 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	YGR269W	P40326	108 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	GLC8	P41818	229 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	RBL2	P48606	106 aa	Known RBP	0.37	□□□□□ -2.35
PAC1	YOR269W	ATP19	P81451	68 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	HRD1	Q08109	551 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	YOL118C	Q08259	102 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	FYV12	Q08559	129 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	SPC3	Q12133	184 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	COA3	Q3E7B2	85 aa		0.37	□□□□□ -2.35
PAC1	YOR269W	RPS25B	P0C0T4	108 aa	Known RBP	0.36	□□□□□ -2.35
PAC1	YOR269W	PRE1	P22141	198 aa	Known RBP	0.36	□□□□□ -2.35
PAC1	YOR269W	HSP12	P22943	109 aa	Known RBP	0.36	□□□□□ -2.35
PAC1	YOR269W	SRP21	P32342	167 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	MRPL24	P36525	258 aa	Predicted RBP	0.36	□□□□□ -2.35
PAC1	YOR269W	YBR242W	P38331	238 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	IPT1	P38954	527 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	CIN5	P40917	295 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	YGR201C	P42936	225 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	YGL230C	P53074	147 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	YGR039W	P53225	103 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	YDR366C	P87287	132 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	YDL157C	Q12082	118 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	PST2	Q12335	198 aa	Known RBP	0.36	□□□□□ -2.35
PAC1	YOR269W	ATP14	Q12349	124 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	RPS25A	Q3E792	108 aa	Predicted RBP	0.36	□□□□□ -2.35
PAC1	YOR269W	SCS22	Q6Q595	175 aa		0.36	□□□□□ -2.35
PAC1	YOR269W	YGL041W-A	P0C5N3	154 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	BUD23	P25627	275 aa	Predicted RBP	0.35	□□□□□ -2.35
PAC1	YOR269W	SHB17	P36136	271 aa	Known RBP	0.35	□□□□□ -2.35
PAC1	YOR269W	POP7	P38291	140 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	SPG1	P50088	95 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	YGL193C	P53097	103 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	HHO1	P53551	258 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	COF1	Q03048	143 aa	Known RBP	0.35	□□□□□ -2.35
PAC1	YOR269W	ELP6	Q04868	273 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	YMR320W	Q04897	101 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	SPC2	Q04969	178 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	NMA1	Q06178	401 aa	Known RBP	0.35	□□□□□ -2.35
PAC1	YOR269W	KEI1	Q06346	221 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	YPR203W	Q08994	102 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	YKL018C-A	Q3E7A7	99 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	SPT14	P32363	452 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	ACP1	P32463	125 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	RPL14A	P36105	138 aa	Known RBP	0.35	□□□□□ -2.35
PAC1	YOR269W	YKR070W	P36151	352 aa	Known RBP	0.35	□□□□□ -2.35
PAC1	YOR269W	RPL14B	P38754	138 aa	Known RBP	0.35	□□□□□ -2.35
PAC1	YOR269W	YEL014C	P39999	101 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	DCV1	P43595	202 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	LSM8	P47093	109 aa	Known RBP	0.35	□□□□□ -2.35
PAC1	YOR269W	DIE2	P50076	525 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	YGR042W	P53227	271 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	YNL019C	P53975	284 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	YCL001W-A	P87012	153 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	EST3	Q03096	181 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	YLR194C	Q05777	254 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	YDL241W	Q07738	123 aa		0.35	□□□□□ -2.35
PAC1	YOR269W	NHP6A	P11632	93 aa	Known RBP	0.34	□□□□□ -2.36
PAC1	YOR269W	MRPL44	P19956	98 aa		0.34	□□□□□ -2.36
PAC1	YOR269W	ATG8	P38182	117 aa	RIP-Chip data	0.34	□□□□□ -2.36	not detected
PAC1	YOR269W	YBR027C	P38220	110 aa		0.34	□□□□□ -2.36
PAC1	YOR269W	RPS20	P38701	121 aa	Known RBP	0.34	□□□□□ -2.36
PAC1	YOR269W	YGL204C	P53089	101 aa		0.34	□□□□□ -2.36
PAC1	YOR269W	ELC1	Q03071	99 aa		0.34	□□□□□ -2.36
PAC1	YOR269W	CNL1	Q06333	122 aa		0.34	□□□□□ -2.36
PAC1	YOR269W	YPR153W	Q06537	140 aa		0.34	□□□□□ -2.36
PAC1	YOR269W	GPI11	Q06636	219 aa		0.34	□□□□□ -2.36
PAC1	YOR269W	NAT5	Q08689	176 aa		0.34	□□□□□ -2.36
PAC1	YOR269W	FMP49	A0A023PZB3	126 aa		0.33	□□□□□ -2.36
PAC1	YOR269W	HAP3	P13434	144 aa		0.33	□□□□□ -2.36
PAC1	YOR269W	FUN14	P18411	198 aa		0.33	□□□□□ -2.36
PAC1	YOR269W	FYV5	P25585	152 aa		0.33	□□□□□ -2.36
PAC1	YOR269W	YCR050C	P25630	102 aa		0.33	□□□□□ -2.36
PAC1	YOR269W	HSP10	P38910	106 aa		0.33	□□□□□ -2.36
PAC1	YOR269W	YAR064W	P39563	99 aa		0.33	□□□□□ -2.36
PAC1	YOR269W	YIL102C	P40488	101 aa		0.33	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 65.3 ms