RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeastyeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWT1YOR166C MRPL31P14063 131 aaPredicted RBP0.41□□□□□ -2.34
SWT1YOR166C PAU16P35994 123 aa0.41□□□□□ -2.34
SWT1YOR166C PAU15P40585 124 aa0.41□□□□□ -2.34
SWT1YOR166C RPS29BP41058 56 aaKnown RBP0.41□□□□□ -2.34
SWT1YOR166C VPS55P47111 140 aa0.41□□□□□ -2.34
SWT1YOR166C MRPS12P53732 153 aa0.41□□□□□ -2.34
SWT1YOR166C SKI3P17883 1432 aaKnown RBP0.41□□□□□ -2.34
SWT1YOR166C YLR157W-EP0CF00 54 aa0.4□□□□□ -2.35
SWT1YOR166C SRB6P32570 121 aa0.4□□□□□ -2.35
SWT1YOR166C RSM19P53733 91 aaPredicted RBP0.4□□□□□ -2.35
SWT1YOR166C LSM6Q06406 86 aaKnown RBP0.4□□□□□ -2.35
SWT1YOR166C YOL118CQ08259 102 aa0.4□□□□□ -2.35
SWT1YOR166C YCL001W-BQ96VH2 84 aa0.4□□□□□ -2.35
SWT1YOR166C PDR10P51533 1564 aa0.4□□□□□ -2.35
SWT1YOR166C RSF2P46974 1380 aa0.4□□□□□ -2.35
SWT1YOR166C TY4B-JP47024 1803 aa0.4□□□□□ -2.35
SWT1YOR166C CDC39P25655 2108 aaKnown RBP0.4□□□□□ -2.35
SWT1YOR166C YRF1-3P0CX14 1859 aa0.39□□□□□ -2.35
SWT1YOR166C YRF1-7P0CX15 1859 aa0.39□□□□□ -2.35
SWT1YOR166C CCW14O13547 238 aa0.39□□□□□ -2.35
SWT1YOR166C ROX3P25046 220 aa0.39□□□□□ -2.35
SWT1YOR166C YHL005CP38752 130 aa0.39□□□□□ -2.35
SWT1YOR166C EMC5P40540 141 aa0.39□□□□□ -2.35
SWT1YOR166C MSL1P40567 111 aaPredicted RBP0.39□□□□□ -2.35
SWT1YOR166C IMP2P46972 177 aa0.39□□□□□ -2.35
SWT1YOR166C YDR210WQ03482 75 aa0.39□□□□□ -2.35
SWT1YOR166C YCR075W-AQ3E830 75 aa0.39□□□□□ -2.35
SWT1YOR166C RPA190P10964 1664 aaKnown RBP0.39□□□□□ -2.35
SWT1YOR166C PRP8P33334 2413 aaKnown RBP0.39□□□□□ -2.35
SWT1YOR166C HMRA1P0CY11 126 aa0.38□□□□□ -2.35
SWT1YOR166C PAU5P43575 122 aa0.38□□□□□ -2.35
SWT1YOR166C YJR128WP47162 119 aa0.38□□□□□ -2.35
SWT1YOR166C SNA2P56508 79 aa0.38□□□□□ -2.35
SWT1YOR166C LCL1Q02786 101 aa0.38□□□□□ -2.35
SWT1YOR166C YDR029WQ12111 104 aa0.38□□□□□ -2.35
SWT1YOR166C YCR095W-AQ3E787 52 aa0.38□□□□□ -2.35
SWT1YOR166C YPL038W-AQ3E7B4 63 aa0.38□□□□□ -2.35
SWT1YOR166C RRT15Q3E811 62 aa0.38□□□□□ -2.35
SWT1YOR166C NTE1Q04958 1679 aa0.37□□□□□ -2.35
SWT1YOR166C SRB8P25648 1427 aa0.37□□□□□ -2.35
SWT1YOR166C SSN2P38931 1420 aa0.37□□□□□ -2.35
SWT1YOR166C URB1P34241 1764 aaKnown RBP0.37□□□□□ -2.35
SWT1YOR166C SWR1Q05471 1514 aa0.37□□□□□ -2.35
SWT1YOR166C YRF1-6P53819 1859 aa0.37□□□□□ -2.35
SWT1YOR166C YLR255CO13574 117 aa0.37□□□□□ -2.35
SWT1YOR166C GCV3P39726 170 aaPredicted RBP0.37□□□□□ -2.35
SWT1YOR166C RSM18P40033 138 aa0.37□□□□□ -2.35
SWT1YOR166C YIL086CP40503 102 aa0.37□□□□□ -2.35
SWT1YOR166C COX12Q01519 83 aa0.37□□□□□ -2.35
SWT1YOR166C YDR042CQ03205 200 aa0.37□□□□□ -2.35
SWT1YOR166C SUS1Q6WNK7 96 aa0.37□□□□□ -2.35
SWT1YOR166C LTE1P07866 1435 aa0.37□□□□□ -2.35
SWT1YOR166C GDB1Q06625 1536 aa0.36□□□□□ -2.35
SWT1YOR166C ECM12O13529 151 aa0.36□□□□□ -2.35
SWT1YOR166C MRP17P28778 131 aa0.36□□□□□ -2.35
SWT1YOR166C MRPL38P35996 138 aaPredicted RBP0.36□□□□□ -2.35
SWT1YOR166C YBL071CP38185 102 aa0.36□□□□□ -2.35
SWT1YOR166C SHU1P38751 150 aa0.36□□□□□ -2.35
SWT1YOR166C SNU13P39990 126 aaKnown RBP0.36□□□□□ -2.35
SWT1YOR166C MRX7P53869 86 aa0.36□□□□□ -2.35
SWT1YOR166C YMR082CQ04276 118 aa0.36□□□□□ -2.35
SWT1YOR166C YGL194C-AQ2V2P6 80 aa0.36□□□□□ -2.35
SWT1YOR166C COX19Q3E731 98 aa0.36□□□□□ -2.35
SWT1YOR166C YSP2Q06681 1438 aa0.36□□□□□ -2.35
SWT1YOR166C ESC1Q03661 1658 aaKnown RBP0.35□□□□□ -2.35
SWT1YOR166C POL1P13382 1468 aa0.35□□□□□ -2.35
SWT1YOR166C PAU6P0CE90 120 aa0.35□□□□□ -2.35
SWT1YOR166C PAU18P0CE91 120 aa0.35□□□□□ -2.35
SWT1YOR166C YBR292CP38357 123 aa0.35□□□□□ -2.35
SWT1YOR166C MPC2P38857 129 aa0.35□□□□□ -2.35
SWT1YOR166C AIM19P40502 157 aa0.35□□□□□ -2.35
SWT1YOR166C SPC1P46965 94 aa0.35□□□□□ -2.35
SWT1YOR166C NHP10Q03435 203 aa0.35□□□□□ -2.35
SWT1YOR166C ICY1Q04329 127 aa0.35□□□□□ -2.35
SWT1YOR166C SCP1Q08873 200 aa0.35□□□□□ -2.35
SWT1YOR166C YNR034W-AQ3E841 98 aa0.35□□□□□ -2.35
SWT1YOR166C RPS11AP0CX47 156 aaKnown RBP0.34□□□□□ -2.35
SWT1YOR166C RPS11BP0CX48 156 aaKnown RBP0.34□□□□□ -2.35
SWT1YOR166C PAU20Q08322 120 aa0.34□□□□□ -2.35
SWT1YOR166C YBR072C-AQ3E794 53 aa0.34□□□□□ -2.35
SWT1YOR166C MHF2Q3E829 80 aa0.34□□□□□ -2.35
SWT1YOR166C SEC16P48415 2195 aaKnown RBP0.34□□□□□ -2.36
SWT1YOR166C BNI1P41832 1953 aa0.34□□□□□ -2.36
SWT1YOR166C PAU1P0CE88 120 aa0.33□□□□□ -2.36
SWT1YOR166C PAU14P0CE89 120 aa0.33□□□□□ -2.36
SWT1YOR166C PAU8P0CE92 120 aa0.33□□□□□ -2.36
SWT1YOR166C PAU11P0CE93 120 aa0.33□□□□□ -2.36
SWT1YOR166C AUA1P32450 94 aa0.33□□□□□ -2.36
SWT1YOR166C NHP2P32495 156 aaPredicted RBP0.33□□□□□ -2.36
SWT1YOR166C PAU13P38725 120 aa0.33□□□□□ -2.36
SWT1YOR166C YHR173CP38864 112 aa0.33□□□□□ -2.36
SWT1YOR166C PAU4P53427 120 aa0.33□□□□□ -2.36
SWT1YOR166C BSC4P53841 131 aa0.33□□□□□ -2.36
SWT1YOR166C PAU10Q03050 120 aa0.33□□□□□ -2.36
SWT1YOR166C YDR010CQ12426 110 aa0.33□□□□□ -2.36
SWT1YOR166C YMR175W-AQ3E766 64 aa0.33□□□□□ -2.36
SWT1YOR166C PAU9Q3E770 120 aa0.33□□□□□ -2.36
SWT1YOR166C YRF1-1P0CX20 1796 aa0.33□□□□□ -2.36
SWT1YOR166C YRF1-5P0CX21 1796 aa0.33□□□□□ -2.36
SWT1YOR166C YRF1-8P0CX22 1796 aa0.33□□□□□ -2.36
Retrieved 100 of 5,963 RNA–protein pairs in 8.4 ms