RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W YKL044WP36092 106 aa7.11□□□□□ -1.27
LIP1YMR298W URM1P40554 99 aaPredicted RBP7.1□□□□□ -1.27
LIP1YMR298W COA3Q3E7B2 85 aa7.1□□□□□ -1.27
LIP1YMR298W DGA1Q08650 418 aa7.09□□□□□ -1.27
LIP1YMR298W YBR126W-AQ8TGU7 68 aa7.09□□□□□ -1.27
LIP1YMR298W YKL070WP36087 169 aa7.08□□□□□ -1.28
LIP1YMR298W COX12Q01519 83 aa7.08□□□□□ -1.28
LIP1YMR298W YCR075W-AQ3E830 75 aa7.08□□□□□ -1.28
LIP1YMR298W YPS5P53057 165 aa7.07□□□□□ -1.28
LIP1YMR298W HAP3P13434 144 aa7.06□□□□□ -1.28
LIP1YMR298W YNL217WP40152 326 aa7.06□□□□□ -1.28
LIP1YMR298W YJR146WP47174 117 aa7.06□□□□□ -1.28
LIP1YMR298W RPL31AP0C2H8 113 aaKnown RBP7.05□□□□□ -1.28
LIP1YMR298W RPL16AP26784 199 aaKnown RBP7.05□□□□□ -1.28
LIP1YMR298W PMP3P87284 55 aa7.05□□□□□ -1.28
LIP1YMR298W UTP20P35194 2493 aaKnown RBP7.04□□□□□ -1.28
LIP1YMR298W TRP1P00912 224 aa7.04□□□□□ -1.28
LIP1YMR298W CWC27Q02770 301 aa7.04□□□□□ -1.28
LIP1YMR298W KRE9P39005 276 aa7.03□□□□□ -1.28
LIP1YMR298W YPL073CP40323 161 aa7.03□□□□□ -1.28
LIP1YMR298W MHR1Q06630 226 aa7.03□□□□□ -1.28
LIP1YMR298W YPL261CQ08976 102 aa7.03□□□□□ -1.28
LIP1YMR298W ADH2P00331 348 aaKnown RBP7.02□□□□□ -1.29
LIP1YMR298W UBC5P15732 148 aa7.02□□□□□ -1.29
LIP1YMR298W YLR281CQ05863 155 aa7.02□□□□□ -1.29
LIP1YMR298W YGR240C-AQ3E786 66 aa7.02□□□□□ -1.29
LIP1YMR298W MRP49P32388 137 aa7.01□□□□□ -1.29
LIP1YMR298W RPL32P38061 130 aaKnown RBP7.01□□□□□ -1.29
LIP1YMR298W YML079WQ03629 201 aa7.01□□□□□ -1.29
LIP1YMR298W YLR363W-AQ3E747 85 aa7.01□□□□□ -1.29
LIP1YMR298W YCR001WP25347 104 aa7□□□□□ -1.29
LIP1YMR298W AIM29P36154 155 aa7□□□□□ -1.29
LIP1YMR298W VAM10Q08474 114 aa7□□□□□ -1.29
LIP1YMR298W DFM1Q12743 341 aaKnown RBP7□□□□□ -1.29
LIP1YMR298W YBR209WP38311 105 aa6.99□□□□□ -1.29
LIP1YMR298W UIP3P39547 235 aa6.99□□□□□ -1.29
LIP1YMR298W AIM11P87275 137 aa6.99□□□□□ -1.29
LIP1YMR298W ATP15P21306 62 aa6.98□□□□□ -1.29
LIP1YMR298W YKR041WP36134 250 aa6.98□□□□□ -1.29
LIP1YMR298W RPF1P38805 295 aaKnown RBP6.98□□□□□ -1.29
LIP1YMR298W RPS8AP0CX39 200 aaKnown RBP6.97□□□□□ -1.29
LIP1YMR298W RPS8BP0CX40 200 aaKnown RBP6.97□□□□□ -1.29
LIP1YMR298W YIL059CP40520 121 aa6.97□□□□□ -1.29
LIP1YMR298W YGL088WP53151 121 aa6.97□□□□□ -1.29
LIP1YMR298W SGF11Q03067 99 aa6.97□□□□□ -1.29
LIP1YMR298W SCW10Q04951 389 aa6.97□□□□□ -1.29
LIP1YMR298W YCL021W-AQ96VH3 125 aa6.97□□□□□ -1.29
LIP1YMR298W YDL022C-AP0C5L6 82 aa6.96□□□□□ -1.3
LIP1YMR298W YPT53P36019 220 aa6.96□□□□□ -1.3
LIP1YMR298W NRG2P38082 220 aa6.96□□□□□ -1.3
LIP1YMR298W YEL008WP40001 126 aa6.96□□□□□ -1.3
LIP1YMR298W ARC15P40518 154 aaRIP-Chip data6.96□□□□□ -1.3not detected
LIP1YMR298W ERI1P62651 68 aaKnown RBP6.95□□□□□ -1.3
LIP1YMR298W YMR122W-AQ3E842 84 aa6.95□□□□□ -1.3
LIP1YMR298W IGO2Q9P305 131 aa6.95□□□□□ -1.3
LIP1YMR298W YLR194CQ05777 254 aa6.94□□□□□ -1.3
LIP1YMR298W CRC1Q12289 327 aa6.94□□□□□ -1.3
LIP1YMR298W YEL067CP39978 195 aa6.93□□□□□ -1.3
LIP1YMR298W PEX17P40155 199 aa6.93□□□□□ -1.3
LIP1YMR298W ELC1Q03071 99 aa6.93□□□□□ -1.3
LIP1YMR298W YAR029WP39549 74 aa6.92□□□□□ -1.3
LIP1YMR298W YNR077CP53758 84 aa6.92□□□□□ -1.3
LIP1YMR298W SHU1P38751 150 aa6.9□□□□□ -1.3
LIP1YMR298W OXA1P39952 402 aa6.9□□□□□ -1.3
LIP1YMR298W CIN5P40917 295 aa6.9□□□□□ -1.3
LIP1YMR298W RDS3Q06835 107 aaPredicted RBP6.9□□□□□ -1.3
LIP1YMR298W DYN1P36022 4092 aa6.9□□□□□ -1.31
LIP1YMR298W MBF1O14467 151 aaKnown RBP6.89□□□□□ -1.31
LIP1YMR298W YPR170W-BP0C5R9 85 aa6.89□□□□□ -1.31
LIP1YMR298W RPL18AP0CX49 186 aaKnown RBP6.89□□□□□ -1.31
LIP1YMR298W RPL18BP0CX50 186 aaKnown RBP6.89□□□□□ -1.31
LIP1YMR298W YER085CP40058 173 aa6.89□□□□□ -1.31
LIP1YMR298W HAL1Q01766 294 aa6.89□□□□□ -1.31
LIP1YMR298W VTC1P40046 129 aaRIP-Chip data6.88□□□□□ -1.31not detected
LIP1YMR298W YKL023C-AQ2V2P3 75 aa6.88□□□□□ -1.31
LIP1YMR298W QCR8P08525 94 aa6.87□□□□□ -1.31
LIP1YMR298W YFR057WP43625 151 aa6.87□□□□□ -1.31
LIP1YMR298W MRPS12P53732 153 aa6.87□□□□□ -1.31
LIP1YMR298W YLR296WQ05898 108 aa6.87□□□□□ -1.31
LIP1YMR298W RPL28P02406 149 aaKnown RBP6.86□□□□□ -1.31
LIP1YMR298W ERG28P40030 148 aa6.86□□□□□ -1.31
LIP1YMR298W YMR295CQ03559 197 aa6.86□□□□□ -1.31
LIP1YMR298W PAI3P01094 68 aa6.85□□□□□ -1.31
LIP1YMR298W AUA1P32450 94 aa6.85□□□□□ -1.31
LIP1YMR298W YER181CP40097 107 aa6.85□□□□□ -1.31
LIP1YMR298W PPT2Q12036 173 aa6.85□□□□□ -1.31
LIP1YMR298W YIL102C-AQ2V2P5 75 aa6.85□□□□□ -1.31
LIP1YMR298W ENV10Q99382 181 aa6.85□□□□□ -1.31
LIP1YMR298W YPR010C-AA5Z2X5 72 aa6.84□□□□□ -1.31
LIP1YMR298W UGX2P32772 223 aa6.84□□□□□ -1.31
LIP1YMR298W YBR219CP38317 127 aa6.84□□□□□ -1.31
LIP1YMR298W SPC1P46965 94 aa6.84□□□□□ -1.31
LIP1YMR298W TMA7Q3E764 64 aaKnown RBP6.83□□□□□ -1.32
LIP1YMR298W ADH1P00330 348 aaKnown RBP6.81□□□□□ -1.32
LIP1YMR298W RPL33AP05744 107 aaKnown RBP6.81□□□□□ -1.32
LIP1YMR298W COX14P39103 70 aa6.81□□□□□ -1.32
LIP1YMR298W RPL33BP41056 107 aaKnown RBP6.81□□□□□ -1.32
LIP1YMR298W POP7P38291 140 aa6.8□□□□□ -1.32
LIP1YMR298W YNL198CP40166 100 aa6.8□□□□□ -1.32
LIP1YMR298W YNL190WP53872 204 aa6.8□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms