RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeastyeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC39YLR440C YDR274CP87283 123 aa3.95□□□□□ -1.78
SEC39YLR440C RPL21AQ02753 160 aaKnown RBP3.95□□□□□ -1.78
SEC39YLR440C RPL21BQ12672 160 aaKnown RBP3.95□□□□□ -1.78
SEC39YLR440C PBA1Q05778 276 aa3.94□□□□□ -1.78
SEC39YLR440C FYV5P25585 152 aa3.94□□□□□ -1.78
SEC39YLR440C FPR2P32472 135 aa3.94□□□□□ -1.78
SEC39YLR440C RPL23AP0CX41 137 aaKnown RBP3.93□□□□□ -1.78
SEC39YLR440C RPL23BP0CX42 137 aaKnown RBP3.93□□□□□ -1.78
SEC39YLR440C NCA3P46955 337 aa3.93□□□□□ -1.78
SEC39YLR440C PAU12P53343 120 aa3.93□□□□□ -1.78
SEC39YLR440C RPL26AP05743 127 aaKnown RBP3.92□□□□□ -1.78
SEC39YLR440C PAU1P0CE88 120 aa3.92□□□□□ -1.78
SEC39YLR440C PAU14P0CE89 120 aa3.92□□□□□ -1.78
SEC39YLR440C PAU6P0CE90 120 aa3.92□□□□□ -1.78
SEC39YLR440C PAU18P0CE91 120 aa3.92□□□□□ -1.78
SEC39YLR440C PAU8P0CE92 120 aa3.92□□□□□ -1.78
SEC39YLR440C PAU11P0CE93 120 aa3.92□□□□□ -1.78
SEC39YLR440C YHR214C-DP0CX93 97 aa3.92□□□□□ -1.78
SEC39YLR440C TIM12P32830 109 aa3.92□□□□□ -1.78
SEC39YLR440C PAU13P38725 120 aa3.92□□□□□ -1.78
SEC39YLR440C YHL005CP38752 130 aa3.92□□□□□ -1.78
SEC39YLR440C PAU10Q03050 120 aa3.92□□□□□ -1.78
SEC39YLR440C PAU20Q08322 120 aa3.92□□□□□ -1.78
SEC39YLR440C PAU9Q3E770 120 aa3.92□□□□□ -1.78
SEC39YLR440C YOR020W-AQ3E824 90 aa3.92□□□□□ -1.78
SEC39YLR440C PAU4P53427 120 aa3.92□□□□□ -1.78
SEC39YLR440C FYV12Q08559 129 aa3.92□□□□□ -1.78
SEC39YLR440C CRC1Q12289 327 aa3.92□□□□□ -1.78
SEC39YLR440C YAR023CD6VPM8 179 aa3.91□□□□□ -1.78
SEC39YLR440C RPL42AP0CX27 106 aaKnown RBP3.91□□□□□ -1.78
SEC39YLR440C RPL42BP0CX28 106 aaKnown RBP3.91□□□□□ -1.78
SEC39YLR440C ATP15P21306 62 aa3.91□□□□□ -1.78
SEC39YLR440C YHR180WP38868 163 aa3.91□□□□□ -1.78
SEC39YLR440C URM1P40554 99 aaPredicted RBP3.91□□□□□ -1.78
SEC39YLR440C IGO1P53897 168 aa3.91□□□□□ -1.78
SEC39YLR440C MET31Q03081 177 aa3.91□□□□□ -1.78
SEC39YLR440C MIM1Q08176 113 aa3.91□□□□□ -1.78
SEC39YLR440C YPR011CQ12251 326 aa3.91□□□□□ -1.78
SEC39YLR440C RPS22BQ3E7Y3 130 aaKnown RBP3.91□□□□□ -1.78
SEC39YLR440C YBL059WP34224 193 aa3.91□□□□□ -1.78
SEC39YLR440C ASK1P35734 292 aa3.91□□□□□ -1.78
SEC39YLR440C QCR10P37299 77 aa3.91□□□□□ -1.78
SEC39YLR440C PAU24P38155 120 aa3.91□□□□□ -1.78
SEC39YLR440C YSY6P38374 65 aa3.91□□□□□ -1.78
SEC39YLR440C YGL118CP53132 145 aa3.91□□□□□ -1.78
SEC39YLR440C MIX17Q03667 156 aa3.91□□□□□ -1.78
SEC39YLR440C PCL9Q12477 304 aa3.91□□□□□ -1.78
SEC39YLR440C SOD1P00445 154 aaKnown RBP3.9□□□□□ -1.79
SEC39YLR440C AIM26P32858 118 aa3.9□□□□□ -1.79
SEC39YLR440C FLO5P38894 1075 aa3.9□□□□□ -1.79
SEC39YLR440C ATP19P81451 68 aa3.9□□□□□ -1.79
SEC39YLR440C LIP1Q03579 150 aa3.9□□□□□ -1.79
SEC39YLR440C FSH2Q05015 223 aa3.9□□□□□ -1.79
SEC39YLR440C HHF1P02309 103 aaKnown RBP3.89□□□□□ -1.79
SEC39YLR440C ROX3P25046 220 aa3.89□□□□□ -1.79
SEC39YLR440C YCR025CP25352 136 aa3.89□□□□□ -1.79
SEC39YLR440C YCR043CP25361 127 aa3.89□□□□□ -1.79
SEC39YLR440C LST8P41318 303 aa3.89□□□□□ -1.79
SEC39YLR440C IMP2P46972 177 aa3.89□□□□□ -1.79
SEC39YLR440C BRP1P53194 125 aa3.89□□□□□ -1.79
SEC39YLR440C EMI1Q04406 187 aa3.89□□□□□ -1.79
SEC39YLR440C YPL261CQ08976 102 aa3.89□□□□□ -1.79
SEC39YLR440C IRA1P18963 3092 aa3.89□□□□□ -1.79
SEC39YLR440C YLR156WP0CE96 114 aa3.89□□□□□ -1.79
SEC39YLR440C YLR159WP0CE97 114 aa3.89□□□□□ -1.79
SEC39YLR440C YLR161WP0CE98 114 aa3.89□□□□□ -1.79
SEC39YLR440C YOL118CQ08259 102 aa3.89□□□□□ -1.79
SEC39YLR440C YPL278CQ08990 100 aa3.89□□□□□ -1.79
SEC39YLR440C ATP20Q12233 115 aa3.89□□□□□ -1.79
SEC39YLR440C YOR343CQ12484 108 aa3.89□□□□□ -1.79
SEC39YLR440C YIL046W-AQ3E7Z4 54 aa3.89□□□□□ -1.79
SEC39YLR440C STT4P37297 1900 aa3.88□□□□□ -1.79
SEC39YLR440C MTC6P38849 526 aa3.88□□□□□ -1.79
SEC39YLR440C MRPS8Q03799 155 aa3.88□□□□□ -1.79
SEC39YLR440C YOR381W-AQ3E804 55 aa3.88□□□□□ -1.79
SEC39YLR440C YER145C-AA0A023PYF4 145 aa3.88□□□□□ -1.79
SEC39YLR440C AGA1P32323 725 aa3.88□□□□□ -1.79
SEC39YLR440C YEL073CP39974 107 aa3.88□□□□□ -1.79
SEC39YLR440C YFL015CP43578 164 aa3.88□□□□□ -1.79
SEC39YLR440C TRS23Q03784 219 aa3.88□□□□□ -1.79
SEC39YLR440C IRC23Q08416 157 aa3.88□□□□□ -1.79
SEC39YLR440C PPT2Q12036 173 aa3.88□□□□□ -1.79
SEC39YLR440C YHR173CP38864 112 aa3.87□□□□□ -1.79
SEC39YLR440C YIL014C-AQ02598 104 aa3.87□□□□□ -1.79
SEC39YLR440C MET32Q12041 191 aa3.87□□□□□ -1.79
SEC39YLR440C TIM22Q12328 207 aa3.87□□□□□ -1.79
SEC39YLR440C PFY1P07274 126 aa3.86□□□□□ -1.79
SEC39YLR440C YFL012WP43580 148 aa3.86□□□□□ -1.79
SEC39YLR440C SOM1Q05676 74 aa3.86□□□□□ -1.79
SEC39YLR440C YOR314WQ12506 109 aa3.86□□□□□ -1.79
SEC39YLR440C YAL065CO13511 128 aa3.86□□□□□ -1.79
SEC39YLR440C MSA2P36157 363 aa3.86□□□□□ -1.79
SEC39YLR440C POL2P21951 2222 aaKnown RBP3.86□□□□□ -1.79
SEC39YLR440C PIS1P06197 220 aaKnown RBP3.85□□□□□ -1.79
SEC39YLR440C ERG2P32352 222 aa3.85□□□□□ -1.79
SEC39YLR440C DSE2P38844 325 aa3.85□□□□□ -1.79
SEC39YLR440C MPC3P53311 146 aa3.85□□□□□ -1.79
SEC39YLR440C VPS68Q12016 184 aa3.85□□□□□ -1.79
SEC39YLR440C RPS22AP0C0W1 130 aaKnown RBP3.85□□□□□ -1.79
SEC39YLR440C PTH1P38876 190 aaKnown RBP3.85□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms