RNA–Protein interactions for RNA: YLR400W

YLR400W, Transcript of Dubious open reading frame, yeastyeast

Gene YLR400W, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YLR400WYLR400W KSH1Q8TGJ3 72 aa1.26□□□□□ -2.21
YLR400WYLR400W YLR419WQ06698 1435 aaKnown RBP1.25□□□□□ -2.21
YLR400WYLR400W YOL118CQ08259 102 aa1.25□□□□□ -2.21
YLR400WYLR400W YLR255CO13574 117 aa1.24□□□□□ -2.21
YLR400WYLR400W TY3B-IQ7LHG5 1498 aaKnown RBP1.24□□□□□ -2.21
YLR400WYLR400W RPL43AP0CX25 92 aaKnown RBP1.23□□□□□ -2.21
YLR400WYLR400W RPL43BP0CX26 92 aa1.23□□□□□ -2.21
YLR400WYLR400W IMP2P46972 177 aa1.23□□□□□ -2.21
YLR400WYLR400W YCL048W-AQ2V2Q2 79 aa1.23□□□□□ -2.21
YLR400WYLR400W YCR095W-AQ3E787 52 aa1.23□□□□□ -2.21
YLR400WYLR400W SEC7P11075 2009 aaKnown RBP1.23□□□□□ -2.21
YLR400WYLR400W TOP2P06786 1428 aaKnown RBP1.23□□□□□ -2.21
YLR400WYLR400W URB1P34241 1764 aaKnown RBP1.22□□□□□ -2.21
YLR400WYLR400W RRT15Q3E811 62 aa1.22□□□□□ -2.21
YLR400WYLR400W YPK9Q12697 1472 aa1.22□□□□□ -2.21
YLR400WYLR400W GEA1P47102 1408 aaPredicted RBP1.22□□□□□ -2.21
YLR400WYLR400W MIX14Q04341 121 aa1.21□□□□□ -2.22
YLR400WYLR400W YOR289WQ12012 251 aaPredicted RBP1.21□□□□□ -2.22
YLR400WYLR400W YPL038W-AQ3E7B4 63 aa1.21□□□□□ -2.22
YLR400WYLR400W SEC16P48415 2195 aaKnown RBP1.21□□□□□ -2.22
YLR400WYLR400W GEA2P39993 1459 aaKnown RBP1.2□□□□□ -2.22
YLR400WYLR400W CCW14O13547 238 aa1.2□□□□□ -2.22
YLR400WYLR400W PAU6P0CE90 120 aa1.2□□□□□ -2.22
YLR400WYLR400W PAU18P0CE91 120 aa1.2□□□□□ -2.22
YLR400WYLR400W HMRA1P0CY11 126 aa1.2□□□□□ -2.22
YLR400WYLR400W YLR307C-AQ3E825 87 aa1.2□□□□□ -2.22
YLR400WYLR400W ROX3P25046 220 aa1.19□□□□□ -2.22
YLR400WYLR400W EMC5P40540 141 aa1.19□□□□□ -2.22
YLR400WYLR400W YDR210WQ03482 75 aa1.19□□□□□ -2.22
YLR400WYLR400W URA2P07259 2214 aaKnown RBP1.19□□□□□ -2.22
YLR400WYLR400W YRF1-6P53819 1859 aa1.18□□□□□ -2.22
YLR400WYLR400W YLR157W-EP0CF00 54 aa1.18□□□□□ -2.22
YLR400WYLR400W AUA1P32450 94 aa1.18□□□□□ -2.22
YLR400WYLR400W SNA2P56508 79 aa1.18□□□□□ -2.22
YLR400WYLR400W REV3P14284 1504 aa1.17□□□□□ -2.22
YLR400WYLR400W CAT8P39113 1433 aa1.16□□□□□ -2.22
YLR400WYLR400W GCV3P39726 170 aaPredicted RBP1.16□□□□□ -2.22
YLR400WYLR400W MSL1P40567 111 aaPredicted RBP1.16□□□□□ -2.22
YLR400WYLR400W YBL071CP38185 102 aa1.15□□□□□ -2.23
YLR400WYLR400W YCL001W-BQ96VH2 84 aa1.15□□□□□ -2.23
YLR400WYLR400W RSF2P46974 1380 aa1.15□□□□□ -2.23
YLR400WYLR400W MRP17P28778 131 aa1.14□□□□□ -2.23
YLR400WYLR400W SHU1P38751 150 aa1.14□□□□□ -2.23
YLR400WYLR400W YIL086CP40503 102 aa1.14□□□□□ -2.23
YLR400WYLR400W SPC1P46965 94 aa1.14□□□□□ -2.23
YLR400WYLR400W NHP10Q03435 203 aa1.14□□□□□ -2.23
YLR400WYLR400W MYO1P08964 1928 aa1.14□□□□□ -2.23
YLR400WYLR400W YHL005CP38752 130 aa1.13□□□□□ -2.23
YLR400WYLR400W MRX7P53869 86 aa1.13□□□□□ -2.23
YLR400WYLR400W YDR029WQ12111 104 aa1.13□□□□□ -2.23
YLR400WYLR400W YCR075W-AQ3E830 75 aa1.13□□□□□ -2.23
YLR400WYLR400W YNR034W-AQ3E841 98 aa1.13□□□□□ -2.23
YLR400WYLR400W SRB8P25648 1427 aa1.13□□□□□ -2.23
YLR400WYLR400W COX12Q01519 83 aa1.12□□□□□ -2.23
YLR400WYLR400W BNI1P41832 1953 aa1.12□□□□□ -2.23
YLR400WYLR400W MRPL38P35996 138 aaPredicted RBP1.11□□□□□ -2.23
YLR400WYLR400W MPC2P38857 129 aa1.11□□□□□ -2.23
YLR400WYLR400W YHR173CP38864 112 aa1.11□□□□□ -2.23
YLR400WYLR400W ICY1Q04329 127 aa1.1□□□□□ -2.23
YLR400WYLR400W PAU20Q08322 120 aa1.1□□□□□ -2.23
YLR400WYLR400W TY4B-HP0C2J7 1802 aa1.1□□□□□ -2.23
YLR400WYLR400W BRR2P32639 2163 aaKnown RBP1.1□□□□□ -2.23
YLR400WYLR400W SUS1Q6WNK7 96 aa1.09□□□□□ -2.23
YLR400WYLR400W RPA190P10964 1664 aaKnown RBP1.08□□□□□ -2.24
YLR400WYLR400W PAU1P0CE88 120 aa1.08□□□□□ -2.24
YLR400WYLR400W PAU14P0CE89 120 aa1.08□□□□□ -2.24
YLR400WYLR400W PAU8P0CE92 120 aa1.08□□□□□ -2.24
YLR400WYLR400W PAU11P0CE93 120 aa1.08□□□□□ -2.24
YLR400WYLR400W PAU13P38725 120 aa1.08□□□□□ -2.24
YLR400WYLR400W RSM18P40033 138 aa1.08□□□□□ -2.24
YLR400WYLR400W PAU10Q03050 120 aa1.08□□□□□ -2.24
YLR400WYLR400W PAU9Q3E770 120 aa1.08□□□□□ -2.24
YLR400WYLR400W BPT1P14772 1559 aa1.08□□□□□ -2.24
YLR400WYLR400W YRF1-1P0CX20 1796 aa1.07□□□□□ -2.24
YLR400WYLR400W YRF1-5P0CX21 1796 aa1.07□□□□□ -2.24
YLR400WYLR400W YRF1-8P0CX22 1796 aa1.07□□□□□ -2.24
YLR400WYLR400W PAU4P53427 120 aa1.07□□□□□ -2.24
YLR400WYLR400W YDR042CQ03205 200 aa1.07□□□□□ -2.24
YLR400WYLR400W POL2P21951 2222 aaKnown RBP1.07□□□□□ -2.24
YLR400WYLR400W YGL194C-AQ2V2P6 80 aa1.06□□□□□ -2.24
YLR400WYLR400W COX19Q3E731 98 aa1.06□□□□□ -2.24
YLR400WYLR400W YBR072C-AQ3E794 53 aa1.06□□□□□ -2.24
YLR400WYLR400W SNU13P39990 126 aaKnown RBP1.05□□□□□ -2.24
YLR400WYLR400W SNF2P22082 1703 aa1.05□□□□□ -2.24
YLR400WYLR400W SSN2P38931 1420 aa1.05□□□□□ -2.24
YLR400WYLR400W RPS11AP0CX47 156 aaKnown RBP1.04□□□□□ -2.24
YLR400WYLR400W RPS11BP0CX48 156 aaKnown RBP1.04□□□□□ -2.24
YLR400WYLR400W NHP2P32495 156 aaPredicted RBP1.04□□□□□ -2.24
YLR400WYLR400W AIM19P40502 157 aa1.04□□□□□ -2.24
YLR400WYLR400W SCP1Q08873 200 aa1.04□□□□□ -2.24
YLR400WYLR400W YDR010CQ12426 110 aa1.04□□□□□ -2.24
YLR400WYLR400W YOL164W-AQ3E7A5 60 aa1.04□□□□□ -2.24
YLR400WYLR400W PDR10P51533 1564 aa1.04□□□□□ -2.24
YLR400WYLR400W ECM12O13529 151 aa1.03□□□□□ -2.24
YLR400WYLR400W SKI3P17883 1432 aaKnown RBP1.03□□□□□ -2.24
YLR400WYLR400W RPA12P32529 125 aaKnown RBP1.02□□□□□ -2.25
YLR400WYLR400W YBR292CP38357 123 aa1.02□□□□□ -2.25
YLR400WYLR400W YMR082CQ04276 118 aa1.02□□□□□ -2.25
YLR400WYLR400W MHF2Q3E829 80 aa1.02□□□□□ -2.25
YLR400WYLR400W NTE1Q04958 1679 aa1.01□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 68.7 ms