RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C YNL217WP40152 326 aa6.84□□□□□ -1.32
SEC61YLR378C GLC8P41818 229 aa6.84□□□□□ -1.32
SEC61YLR378C YPS5P53057 165 aa6.84□□□□□ -1.32
SEC61YLR378C PMP3P87284 55 aa6.84□□□□□ -1.32
SEC61YLR378C YLR281CQ05863 155 aa6.84□□□□□ -1.32
SEC61YLR378C PAU23Q07987 124 aa6.83□□□□□ -1.32
SEC61YLR378C DGA1Q08650 418 aa6.83□□□□□ -1.32
SEC61YLR378C PAU17Q12370 124 aa6.83□□□□□ -1.32
SEC61YLR378C YKL044WP36092 106 aa6.82□□□□□ -1.32
SEC61YLR378C YCR001WP25347 104 aa6.81□□□□□ -1.32
SEC61YLR378C YLR122CQ12312 125 aa6.81□□□□□ -1.32
SEC61YLR378C COA3Q3E7B2 85 aa6.81□□□□□ -1.32
SEC61YLR378C YKL070WP36087 169 aa6.8□□□□□ -1.32
SEC61YLR378C YGR240C-AQ3E786 66 aa6.8□□□□□ -1.32
SEC61YLR378C ADH2P00331 348 aaKnown RBP6.79□□□□□ -1.32
SEC61YLR378C TRP1P00912 224 aa6.79□□□□□ -1.32
SEC61YLR378C RPL31AP0C2H8 113 aaKnown RBP6.79□□□□□ -1.32
SEC61YLR378C YBR209WP38311 105 aa6.79□□□□□ -1.32
SEC61YLR378C YJR146WP47174 117 aa6.79□□□□□ -1.32
SEC61YLR378C RPL16AP26784 199 aaKnown RBP6.78□□□□□ -1.32
SEC61YLR378C KRE9P39005 276 aa6.78□□□□□ -1.32
SEC61YLR378C VAM10Q08474 114 aa6.78□□□□□ -1.32
SEC61YLR378C YPL261CQ08976 102 aa6.78□□□□□ -1.32
SEC61YLR378C HAP3P13434 144 aa6.77□□□□□ -1.33
SEC61YLR378C UBC5P15732 148 aa6.77□□□□□ -1.33
SEC61YLR378C AIM29P36154 155 aa6.77□□□□□ -1.33
SEC61YLR378C SGF11Q03067 99 aa6.77□□□□□ -1.33
SEC61YLR378C RPL32P38061 130 aaKnown RBP6.76□□□□□ -1.33
SEC61YLR378C YPL073CP40323 161 aa6.76□□□□□ -1.33
SEC61YLR378C CWC27Q02770 301 aa6.76□□□□□ -1.33
SEC61YLR378C YPT53P36019 220 aa6.76□□□□□ -1.33
SEC61YLR378C NRG2P38082 220 aa6.76□□□□□ -1.33
SEC61YLR378C YIL059CP40520 121 aa6.76□□□□□ -1.33
SEC61YLR378C MRP49P32388 137 aa6.75□□□□□ -1.33
SEC61YLR378C YGL088WP53151 121 aa6.75□□□□□ -1.33
SEC61YLR378C MET32Q12041 191 aa6.75□□□□□ -1.33
SEC61YLR378C YCL021W-AQ96VH3 125 aa6.75□□□□□ -1.33
SEC61YLR378C YML079WQ03629 201 aa6.74□□□□□ -1.33
SEC61YLR378C SCW10Q04951 389 aa6.74□□□□□ -1.33
SEC61YLR378C CRC1Q12289 327 aa6.74□□□□□ -1.33
SEC61YLR378C ATP15P21306 62 aa6.73□□□□□ -1.33
SEC61YLR378C ARC15P40518 154 aaRIP-Chip data6.73□□□□□ -1.33not detected
SEC61YLR378C ERI1P62651 68 aaKnown RBP6.73□□□□□ -1.33
SEC61YLR378C DFM1Q12743 341 aaKnown RBP6.73□□□□□ -1.33
SEC61YLR378C YLR363W-AQ3E747 85 aa6.73□□□□□ -1.33
SEC61YLR378C RPF1P38805 295 aaKnown RBP6.72□□□□□ -1.33
SEC61YLR378C AIM11P87275 137 aa6.72□□□□□ -1.33
SEC61YLR378C YKR041WP36134 250 aa6.71□□□□□ -1.34
SEC61YLR378C YEL008WP40001 126 aa6.71□□□□□ -1.34
SEC61YLR378C YMR122W-AQ3E842 84 aa6.71□□□□□ -1.34
SEC61YLR378C HAL1Q01766 294 aa6.7□□□□□ -1.34
SEC61YLR378C RDS3Q06835 107 aaPredicted RBP6.7□□□□□ -1.34
SEC61YLR378C RPS8AP0CX39 200 aaKnown RBP6.69□□□□□ -1.34
SEC61YLR378C RPS8BP0CX40 200 aaKnown RBP6.69□□□□□ -1.34
SEC61YLR378C MHR1Q06630 226 aa6.69□□□□□ -1.34
SEC61YLR378C IGO2Q9P305 131 aa6.69□□□□□ -1.34
SEC61YLR378C DYN1P36022 4092 aa6.69□□□□□ -1.34
SEC61YLR378C UIP3P39547 235 aa6.68□□□□□ -1.34
SEC61YLR378C YAR029WP39549 74 aa6.68□□□□□ -1.34
SEC61YLR378C PEX17P40155 199 aa6.68□□□□□ -1.34
SEC61YLR378C ELC1Q03071 99 aa6.67□□□□□ -1.34
SEC61YLR378C SHU1P38751 150 aa6.67□□□□□ -1.34
SEC61YLR378C YER085CP40058 173 aa6.67□□□□□ -1.34
SEC61YLR378C YLR194CQ05777 254 aa6.67□□□□□ -1.34
SEC61YLR378C YDL022C-AP0C5L6 82 aa6.66□□□□□ -1.34
SEC61YLR378C SPC1P46965 94 aa6.66□□□□□ -1.34
SEC61YLR378C RPL18AP0CX49 186 aaKnown RBP6.64□□□□□ -1.35
SEC61YLR378C RPL18BP0CX50 186 aaKnown RBP6.64□□□□□ -1.35
SEC61YLR378C ERG28P40030 148 aa6.64□□□□□ -1.35
SEC61YLR378C CIN5P40917 295 aa6.64□□□□□ -1.35
SEC61YLR378C YNR077CP53758 84 aa6.64□□□□□ -1.35
SEC61YLR378C YPR010C-AA5Z2X5 72 aa6.63□□□□□ -1.35
SEC61YLR378C OXA1P39952 402 aa6.63□□□□□ -1.35
SEC61YLR378C YEL067CP39978 195 aa6.63□□□□□ -1.35
SEC61YLR378C ENV10Q99382 181 aa6.63□□□□□ -1.35
SEC61YLR378C QCR8P08525 94 aa6.62□□□□□ -1.35
SEC61YLR378C AUA1P32450 94 aa6.62□□□□□ -1.35
SEC61YLR378C PPT2Q12036 173 aa6.62□□□□□ -1.35
SEC61YLR378C RPL28P02406 149 aaKnown RBP6.61□□□□□ -1.35
SEC61YLR378C YFR057WP43625 151 aa6.61□□□□□ -1.35
SEC61YLR378C YMR295CQ03559 197 aa6.61□□□□□ -1.35
SEC61YLR378C UTP20P35194 2493 aaKnown RBP6.61□□□□□ -1.35
SEC61YLR378C YRA2P36036 203 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
SEC61YLR378C RPL33AP05744 107 aaKnown RBP6.59□□□□□ -1.35
SEC61YLR378C VTC1P40046 129 aaRIP-Chip data6.59□□□□□ -1.35not detected
SEC61YLR378C YER181CP40097 107 aa6.59□□□□□ -1.35
SEC61YLR378C RPL33BP41056 107 aaKnown RBP6.59□□□□□ -1.35
SEC61YLR378C MRPS12P53732 153 aa6.59□□□□□ -1.35
SEC61YLR378C ADH1P00330 348 aaKnown RBP6.59□□□□□ -1.36
SEC61YLR378C PAI3P01094 68 aa6.59□□□□□ -1.36
SEC61YLR378C UGX2P32772 223 aa6.59□□□□□ -1.36
SEC61YLR378C YMR320WQ04897 101 aa6.59□□□□□ -1.36
SEC61YLR378C MBF1O14467 151 aaKnown RBP6.58□□□□□ -1.36
SEC61YLR378C YPR170W-BP0C5R9 85 aa6.58□□□□□ -1.36
SEC61YLR378C YBR219CP38317 127 aa6.58□□□□□ -1.36
SEC61YLR378C TMA7Q3E764 64 aaKnown RBP6.58□□□□□ -1.36
SEC61YLR378C YLR296WQ05898 108 aa6.57□□□□□ -1.36
SEC61YLR378C YKL023C-AQ2V2P3 75 aa6.57□□□□□ -1.36
SEC61YLR378C YMR175W-AQ3E766 64 aa6.57□□□□□ -1.36
SEC61YLR378C COX14P39103 70 aa6.56□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms