RNA–Protein interactions for RNA: YKR092C

SRP40, Transcript of Nucleolar serine-rich protein, yeastyeast

Gene SRP40, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRP40YKR092C COX19Q3E731 98 aa3.12□□□□□ -1.91
SRP40YKR092C YMR175W-AQ3E766 64 aa3.12□□□□□ -1.91
SRP40YKR092C NAG1Q8TGN9 163 aa3.12□□□□□ -1.91
SRP40YKR092C STT4P37297 1900 aa3.12□□□□□ -1.91
SRP40YKR092C SEC11P15367 167 aa3.11□□□□□ -1.91
SRP40YKR092C PGU1P47180 361 aa3.11□□□□□ -1.91
SRP40YKR092C GIS2P53849 153 aaKnown RBP RIP-Chip data3.11□□□□□ -1.91not detected
SRP40YKR092C ATO3Q12359 275 aa3.11□□□□□ -1.91
SRP40YKR092C YER078W-AQ3E7A2 54 aa3.11□□□□□ -1.91
SRP40YKR092C RPS14AP06367 137 aaKnown RBP3.1□□□□□ -1.91
SRP40YKR092C RPL23AP0CX41 137 aaKnown RBP3.1□□□□□ -1.91
SRP40YKR092C RPL23BP0CX42 137 aaKnown RBP3.1□□□□□ -1.91
SRP40YKR092C FZF1P32805 299 aa3.1□□□□□ -1.91
SRP40YKR092C GPX1P36014 167 aa3.1□□□□□ -1.91
SRP40YKR092C RPS14BP39516 138 aaKnown RBP3.1□□□□□ -1.91
SRP40YKR092C MRPS8Q03799 155 aa3.1□□□□□ -1.91
SRP40YKR092C YOL014WQ08110 124 aa3.1□□□□□ -1.91
SRP40YKR092C RRT15Q3E811 62 aa3.1□□□□□ -1.91
SRP40YKR092C YAR023CD6VPM8 179 aa3.09□□□□□ -1.91
SRP40YKR092C PIS1P06197 220 aaKnown RBP3.09□□□□□ -1.91
SRP40YKR092C IMP1P28627 190 aa3.09□□□□□ -1.91
SRP40YKR092C YKR045CP36138 183 aa3.09□□□□□ -1.91
SRP40YKR092C RPL21AQ02753 160 aaKnown RBP3.09□□□□□ -1.91
SRP40YKR092C YMR181CQ03231 154 aa3.09□□□□□ -1.91
SRP40YKR092C YHP1Q04116 353 aa3.09□□□□□ -1.91
SRP40YKR092C ICY1Q04329 127 aa3.09□□□□□ -1.91
SRP40YKR092C LSM6Q06406 86 aaKnown RBP3.09□□□□□ -1.91
SRP40YKR092C RPL21BQ12672 160 aaKnown RBP3.09□□□□□ -1.91
SRP40YKR092C RPB9P27999 122 aa3.08□□□□□ -1.92
SRP40YKR092C YHL005CP38752 130 aa3.08□□□□□ -1.92
SRP40YKR092C COX14P39103 70 aa3.08□□□□□ -1.92
SRP40YKR092C VTC1P40046 129 aaRIP-Chip data3.08□□□□□ -1.92not detected
SRP40YKR092C YPI1P43587 155 aa3.08□□□□□ -1.92
SRP40YKR092C NCA3P46955 337 aa3.08□□□□□ -1.92
SRP40YKR092C PBA1Q05778 276 aa3.08□□□□□ -1.92
SRP40YKR092C YHR213WP0CI67 198 aa3.07□□□□□ -1.92
SRP40YKR092C ATP15P21306 62 aa3.07□□□□□ -1.92
SRP40YKR092C FYV5P25585 152 aa3.07□□□□□ -1.92
SRP40YKR092C ERG2P32352 222 aa3.07□□□□□ -1.92
SRP40YKR092C YBL059WP34224 193 aa3.07□□□□□ -1.92
SRP40YKR092C QCR10P37299 77 aa3.07□□□□□ -1.92
SRP40YKR092C ICS3P47034 131 aa3.07□□□□□ -1.92
SRP40YKR092C YJL028WP47062 111 aa3.07□□□□□ -1.92
SRP40YKR092C LIP1Q03579 150 aa3.07□□□□□ -1.92
SRP40YKR092C HHF1P02309 103 aaKnown RBP3.06□□□□□ -1.92
SRP40YKR092C RPL26AP05743 127 aaKnown RBP3.06□□□□□ -1.92
SRP40YKR092C MRPL31P14063 131 aaPredicted RBP3.06□□□□□ -1.92
SRP40YKR092C YEL045CP32616 141 aa3.06□□□□□ -1.92
SRP40YKR092C MTC6P38849 526 aa3.06□□□□□ -1.92
SRP40YKR092C YER187WP40102 141 aa3.06□□□□□ -1.92
SRP40YKR092C YGL118CP53132 145 aa3.06□□□□□ -1.92
SRP40YKR092C NCE101Q02820 53 aa3.06□□□□□ -1.92
SRP40YKR092C YOL118CQ08259 102 aa3.06□□□□□ -1.92
SRP40YKR092C RPS22BQ3E7Y3 130 aaKnown RBP3.06□□□□□ -1.92
SRP40YKR092C CYR1P08678 2026 aaKnown RBP3.05□□□□□ -1.92
SRP40YKR092C YLR156WP0CE96 114 aa3.05□□□□□ -1.92
SRP40YKR092C YLR159WP0CE97 114 aa3.05□□□□□ -1.92
SRP40YKR092C YLR161WP0CE98 114 aa3.05□□□□□ -1.92
SRP40YKR092C FPR1P20081 114 aaKnown RBP3.05□□□□□ -1.92
SRP40YKR092C YSY6P38374 65 aa3.05□□□□□ -1.92
SRP40YKR092C PAU4P53427 120 aa3.05□□□□□ -1.92
SRP40YKR092C FSH2Q05015 223 aa3.05□□□□□ -1.92
SRP40YKR092C YPL261CQ08976 102 aa3.05□□□□□ -1.92
SRP40YKR092C ATP20Q12233 115 aa3.05□□□□□ -1.92
SRP40YKR092C PAU1P0CE88 120 aa3.04□□□□□ -1.92
SRP40YKR092C PAU14P0CE89 120 aa3.04□□□□□ -1.92
SRP40YKR092C PAU6P0CE90 120 aa3.04□□□□□ -1.92
SRP40YKR092C PAU18P0CE91 120 aa3.04□□□□□ -1.92
SRP40YKR092C PAU8P0CE92 120 aa3.04□□□□□ -1.92
SRP40YKR092C PAU11P0CE93 120 aa3.04□□□□□ -1.92
SRP40YKR092C YHR214C-DP0CX93 97 aa3.04□□□□□ -1.92
SRP40YKR092C FPR2P32472 135 aa3.04□□□□□ -1.92
SRP40YKR092C PAU13P38725 120 aa3.04□□□□□ -1.92
SRP40YKR092C YHR180WP38868 163 aa3.04□□□□□ -1.92
SRP40YKR092C ARC15P40518 154 aaRIP-Chip data3.04□□□□□ -1.92not detected
SRP40YKR092C ECO1P43605 281 aa3.04□□□□□ -1.92
SRP40YKR092C PAU10Q03050 120 aa3.04□□□□□ -1.92
SRP40YKR092C MIM1Q08176 113 aa3.04□□□□□ -1.92
SRP40YKR092C PAU20Q08322 120 aa3.04□□□□□ -1.92
SRP40YKR092C YPL278CQ08990 100 aa3.04□□□□□ -1.92
SRP40YKR092C YOR343CQ12484 108 aa3.04□□□□□ -1.92
SRP40YKR092C PAU9Q3E770 120 aa3.04□□□□□ -1.92
SRP40YKR092C YOR381W-AQ3E804 55 aa3.04□□□□□ -1.92
SRP40YKR092C AGA2P32781 87 aa3.03□□□□□ -1.92
SRP40YKR092C MPC3P53311 146 aa3.03□□□□□ -1.92
SRP40YKR092C YDR274CP87283 123 aa3.03□□□□□ -1.92
SRP40YKR092C SOM1Q05676 74 aa3.03□□□□□ -1.92
SRP40YKR092C YOR268CQ08734 132 aa3.03□□□□□ -1.92
SRP40YKR092C TIM22Q12328 207 aa3.03□□□□□ -1.92
SRP40YKR092C COA2Q3E823 68 aa3.03□□□□□ -1.92
SRP40YKR092C RRT1P38192 103 aa3.02□□□□□ -1.93
SRP40YKR092C YNL208WP40159 199 aaKnown RBP3.02□□□□□ -1.93
SRP40YKR092C IMP2P46972 177 aa3.02□□□□□ -1.93
SRP40YKR092C CIS3P47001 227 aa3.02□□□□□ -1.93
SRP40YKR092C VPS55P47111 140 aa3.02□□□□□ -1.93
SRP40YKR092C IRC19Q07843 230 aa3.02□□□□□ -1.93
SRP40YKR092C YOL029CQ08187 201 aa3.02□□□□□ -1.93
SRP40YKR092C TMC1Q08422 150 aaPredicted RBP3.02□□□□□ -1.93
SRP40YKR092C YKL065W-AQ2V2P2 73 aa3.02□□□□□ -1.93
SRP40YKR092C ROX3P25046 220 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 48 ms