RNA–Protein interactions for RNA: YKR043C

SHB17, Transcript of Sedoheptulose bisphosphatase involved in riboneogenesis, yeastyeast

Gene SHB17, Length 816 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHB17YKR043C TMA7Q3E764 64 aaKnown RBP7.2□□□□□ -1.26
SHB17YKR043C YIL002W-AQ3E7Z5 69 aa7.2□□□□□ -1.26
SHB17YKR043C HAC1P41546 238 aa7.19□□□□□ -1.26
SHB17YKR043C WIP1Q2V2P8 89 aa7.19□□□□□ -1.26
SHB17YKR043C YMR122W-AQ3E842 84 aa7.19□□□□□ -1.26
SHB17YKR043C RPL33AP05744 107 aaKnown RBP7.18□□□□□ -1.26
SHB17YKR043C FYV4P38783 130 aaPredicted RBP7.18□□□□□ -1.26
SHB17YKR043C SEC72P39742 193 aaKnown RBP7.18□□□□□ -1.26
SHB17YKR043C RPL33BP41056 107 aaKnown RBP7.18□□□□□ -1.26
SHB17YKR043C YGL230CP53074 147 aa7.18□□□□□ -1.26
SHB17YKR043C SAL1D6W196 494 aa7.17□□□□□ -1.26
SHB17YKR043C ARC15P40518 154 aaRIP-Chip data7.17□□□□□ -1.26not detected
SHB17YKR043C RTC6O14464 93 aa7.16□□□□□ -1.26
SHB17YKR043C MRP49P32388 137 aa7.16□□□□□ -1.26
SHB17YKR043C YER076CP40049 302 aa7.16□□□□□ -1.26
SHB17YKR043C YNL200CP40165 246 aaKnown RBP7.16□□□□□ -1.26
SHB17YKR043C MSL1P40567 111 aaPredicted RBP7.16□□□□□ -1.26
SHB17YKR043C SEC11P15367 167 aa7.15□□□□□ -1.26
SHB17YKR043C YLR050CQ12155 161 aaKnown RBP7.15□□□□□ -1.26
SHB17YKR043C PFY1P07274 126 aa7.14□□□□□ -1.27
SHB17YKR043C RPL11AP0C0W9 174 aaKnown RBP7.14□□□□□ -1.27
SHB17YKR043C YPR170W-BP0C5R9 85 aa7.14□□□□□ -1.27
SHB17YKR043C GLO1P50107 326 aa7.14□□□□□ -1.27
SHB17YKR043C MGR2Q02889 113 aa7.14□□□□□ -1.27
SHB17YKR043C RPL11BQ3E757 174 aaPredicted RBP7.14□□□□□ -1.27
SHB17YKR043C PRE1P22141 198 aaKnown RBP7.13□□□□□ -1.27
SHB17YKR043C YKR070WP36151 352 aaKnown RBP7.13□□□□□ -1.27
SHB17YKR043C VTS1Q08831 523 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
SHB17YKR043C DIF1O13577 133 aa7.12□□□□□ -1.27
SHB17YKR043C RPL16AP26784 199 aaKnown RBP7.12□□□□□ -1.27
SHB17YKR043C RPF1P38805 295 aaKnown RBP7.12□□□□□ -1.27
SHB17YKR043C SVP26P38869 228 aa7.12□□□□□ -1.27
SHB17YKR043C YIL059CP40520 121 aa7.12□□□□□ -1.27
SHB17YKR043C GAT4P40569 121 aa7.12□□□□□ -1.27
SHB17YKR043C YIL014C-AQ02598 104 aa7.12□□□□□ -1.27
SHB17YKR043C YDR115WQ04598 105 aa7.12□□□□□ -1.27
SHB17YKR043C YPR010C-AA5Z2X5 72 aa7.11□□□□□ -1.27
SHB17YKR043C AQY1P0CD91 305 aa7.11□□□□□ -1.27
SHB17YKR043C ANB1P19211 157 aa7.11□□□□□ -1.27
SHB17YKR043C YBR209WP38311 105 aa7.11□□□□□ -1.27
SHB17YKR043C YGL088WP53151 121 aa7.11□□□□□ -1.27
SHB17YKR043C YMR320WQ04897 101 aa7.11□□□□□ -1.27
SHB17YKR043C RRT15Q3E811 62 aa7.11□□□□□ -1.27
SHB17YKR043C HTL1Q9URQ5 78 aa7.11□□□□□ -1.27
SHB17YKR043C AIM29P36154 155 aa7.1□□□□□ -1.27
SHB17YKR043C YJR146WP47174 117 aa7.1□□□□□ -1.27
SHB17YKR043C YML079WQ03629 201 aa7.1□□□□□ -1.27
SHB17YKR043C POP3P53833 195 aaPredicted RBP7.09□□□□□ -1.27
SHB17YKR043C FCF1Q05498 189 aaPredicted RBP7.09□□□□□ -1.27
SHB17YKR043C YLR363W-AQ3E747 85 aa7.09□□□□□ -1.27
SHB17YKR043C SCS22Q6Q595 175 aa7.09□□□□□ -1.27
SHB17YKR043C MBF1O14467 151 aaKnown RBP7.08□□□□□ -1.28
SHB17YKR043C ADH2P00331 348 aaKnown RBP7.08□□□□□ -1.28
SHB17YKR043C TOS6P48560 102 aa7.08□□□□□ -1.28
SHB17YKR043C RUB1Q03919 77 aa7.08□□□□□ -1.28
SHB17YKR043C ERG28P40030 148 aa7.07□□□□□ -1.28
SHB17YKR043C BET5Q03630 159 aa7.07□□□□□ -1.28
SHB17YKR043C YOR008C-AQ3E7B9 74 aa7.07□□□□□ -1.28
SHB17YKR043C TRP1P00912 224 aa7.06□□□□□ -1.28
SHB17YKR043C PCL2P25693 308 aa7.06□□□□□ -1.28
SHB17YKR043C GIS2P53849 153 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28 RIP-Chip
SHB17YKR043C YER085CP40058 173 aa7.04□□□□□ -1.28
SHB17YKR043C LCL2Q08045 131 aa7.04□□□□□ -1.28
SHB17YKR043C SOH1P38633 127 aa7.03□□□□□ -1.28
SHB17YKR043C YEL008WP40001 126 aa7.03□□□□□ -1.28
SHB17YKR043C YPL229WQ99395 206 aa7.03□□□□□ -1.28
SHB17YKR043C PAI3P01094 68 aa7.02□□□□□ -1.29
SHB17YKR043C APS1P35181 156 aa7.02□□□□□ -1.29
SHB17YKR043C YKL044WP36092 106 aa7.02□□□□□ -1.29
SHB17YKR043C URM1P40554 99 aaPredicted RBP7.02□□□□□ -1.29
SHB17YKR043C YCL021W-AQ96VH3 125 aa7.02□□□□□ -1.29
SHB17YKR043C RPL27BP0C2H7 136 aaKnown RBP7.01□□□□□ -1.29
SHB17YKR043C HMRA2P0CY13 119 aa7.01□□□□□ -1.29
SHB17YKR043C YDR042CQ03205 200 aa7.01□□□□□ -1.29
SHB17YKR043C YAR023CD6VPM8 179 aa7□□□□□ -1.29
SHB17YKR043C POP7P38291 140 aa7□□□□□ -1.29
SHB17YKR043C CIN5P40917 295 aa7□□□□□ -1.29
SHB17YKR043C YBR219CP38317 127 aa6.99□□□□□ -1.29
SHB17YKR043C YPL257WQ08974 193 aa6.99□□□□□ -1.29
SHB17YKR043C COA3Q3E7B2 85 aa6.99□□□□□ -1.29
SHB17YKR043C ENV10Q99382 181 aa6.99□□□□□ -1.29
SHB17YKR043C CPR1P14832 162 aaKnown RBP6.98□□□□□ -1.29
SHB17YKR043C RPC10P40422 70 aa6.98□□□□□ -1.29
SHB17YKR043C YLR112WQ12130 139 aa6.98□□□□□ -1.29
SHB17YKR043C YIL102C-AQ2V2P5 75 aa6.98□□□□□ -1.29
SHB17YKR043C MRP10O75012 95 aa6.97□□□□□ -1.29
SHB17YKR043C ARO2P28777 376 aaKnown RBP6.97□□□□□ -1.29
SHB17YKR043C YBL081WP38180 368 aaKnown RBP6.97□□□□□ -1.29
SHB17YKR043C YAR029WP39549 74 aa6.97□□□□□ -1.29
SHB17YKR043C YAL064WP39711 94 aa6.97□□□□□ -1.29
SHB17YKR043C NUP42P49686 430 aaKnown RBP6.97□□□□□ -1.29
SHB17YKR043C YDR034C-AP0C289 58 aa6.96□□□□□ -1.3
SHB17YKR043C YNL198CP40166 100 aa6.96□□□□□ -1.3
SHB17YKR043C YKL023C-AQ2V2P3 75 aa6.95□□□□□ -1.3
SHB17YKR043C HYP2P23301 157 aaKnown RBP6.94□□□□□ -1.3
SHB17YKR043C YMR295CQ03559 197 aa6.94□□□□□ -1.3
SHB17YKR043C YLR296WQ05898 108 aa6.94□□□□□ -1.3
SHB17YKR043C YMR103CQ04436 120 aa6.93□□□□□ -1.3
SHB17YKR043C YLR194CQ05777 254 aa6.93□□□□□ -1.3
SHB17YKR043C SLO1Q3E784 85 aa6.93□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms