RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeastyeast

Gene SWD2, Length 990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD2YKL018W YMR175W-AQ3E766 64 aa2.2□□□□□ -2.06
SWD2YKL018W NUP192P47054 1683 aa2.19□□□□□ -2.06
SWD2YKL018W VMA21P41806 77 aa2.19□□□□□ -2.06
SWD2YKL018W IRC19Q07843 230 aa2.19□□□□□ -2.06
SWD2YKL018W IRC23Q08416 157 aa2.19□□□□□ -2.06
SWD2YKL018W SUS1Q6WNK7 96 aa2.19□□□□□ -2.06
SWD2YKL018W ENV10Q99382 181 aa2.19□□□□□ -2.06
SWD2YKL018W TOM1Q03280 3268 aa2.19□□□□□ -2.06
SWD2YKL018W UTP10P42945 1769 aaKnown RBP2.18□□□□□ -2.06
SWD2YKL018W SNF2P22082 1703 aa2.18□□□□□ -2.06
SWD2YKL018W RGM1Q00453 211 aa2.18□□□□□ -2.06
SWD2YKL018W NMA1Q06178 401 aaKnown RBP2.18□□□□□ -2.06
SWD2YKL018W YDL241WQ07738 123 aa2.18□□□□□ -2.06
SWD2YKL018W YOL131WQ08270 108 aa2.18□□□□□ -2.06
SWD2YKL018W YLR363W-AQ3E747 85 aa2.18□□□□□ -2.06
SWD2YKL018W YLR422WQ06409 1932 aa2.18□□□□□ -2.06
SWD2YKL018W MSB2P32334 1306 aa2.17□□□□□ -2.06
SWD2YKL018W PAU21P0CE86 164 aa2.17□□□□□ -2.06
SWD2YKL018W PAU22P0CE87 164 aa2.17□□□□□ -2.06
SWD2YKL018W RPL40AP0CH08 128 aaKnown RBP2.17□□□□□ -2.06
SWD2YKL018W RPL40BP0CH09 128 aaKnown RBP2.17□□□□□ -2.06
SWD2YKL018W YHR213WP0CI67 198 aa2.17□□□□□ -2.06
SWD2YKL018W YEL067CP39978 195 aa2.17□□□□□ -2.06
SWD2YKL018W YPL261CQ08976 102 aa2.17□□□□□ -2.06
SWD2YKL018W YOR015WQ12169 119 aa2.17□□□□□ -2.06
SWD2YKL018W DAD1Q12248 94 aa2.17□□□□□ -2.06
SWD2YKL018W MYO1P08964 1928 aa2.17□□□□□ -2.06
SWD2YKL018W ECM29P38737 1868 aa2.16□□□□□ -2.06
SWD2YKL018W GSC2P40989 1895 aa2.16□□□□□ -2.06
SWD2YKL018W MLP1Q02455 1875 aaKnown RBP2.16□□□□□ -2.06
SWD2YKL018W TOM6P33448 61 aa2.16□□□□□ -2.06
SWD2YKL018W YNR077CP53758 84 aa2.16□□□□□ -2.06
SWD2YKL018W GRX5Q02784 150 aa2.16□□□□□ -2.06
SWD2YKL018W PIR1Q03178 341 aa2.16□□□□□ -2.06
SWD2YKL018W ATG41Q12048 136 aa2.16□□□□□ -2.06
SWD2YKL018W YDR119W-AQ2V2P9 66 aa2.16□□□□□ -2.06
SWD2YKL018W RPS25AQ3E792 108 aaPredicted RBP2.16□□□□□ -2.06
SWD2YKL018W YPR117WQ06116 2489 aa2.15□□□□□ -2.06
SWD2YKL018W PAU2P32612 120 aa2.15□□□□□ -2.07
SWD2YKL018W YJL027CP47063 138 aaPredicted RBP2.15□□□□□ -2.07
SWD2YKL018W PAU12P53343 120 aa2.15□□□□□ -2.07
SWD2YKL018W RPL22BP56628 122 aaKnown RBP2.15□□□□□ -2.07
SWD2YKL018W YML079WQ03629 201 aa2.15□□□□□ -2.07
SWD2YKL018W CUE4Q04201 117 aaPredicted RBP2.15□□□□□ -2.07
SWD2YKL018W PAU23Q07987 124 aa2.15□□□□□ -2.07
SWD2YKL018W NAT5Q08689 176 aa2.15□□□□□ -2.07
SWD2YKL018W PAU17Q12370 124 aa2.15□□□□□ -2.07
SWD2YKL018W OST5Q92316 86 aa2.15□□□□□ -2.07
SWD2YKL018W ATX1P38636 73 aa2.14□□□□□ -2.07
SWD2YKL018W YHL005CP38752 130 aa2.14□□□□□ -2.07
SWD2YKL018W RSM18P40033 138 aa2.14□□□□□ -2.07
SWD2YKL018W YGR269WP40326 108 aa2.14□□□□□ -2.07
SWD2YKL018W BOL2P53082 120 aa2.14□□□□□ -2.07
SWD2YKL018W BRP1P53194 125 aa2.14□□□□□ -2.07
SWD2YKL018W POP3P53833 195 aaPredicted RBP2.14□□□□□ -2.07
SWD2YKL018W ICY1Q04329 127 aa2.14□□□□□ -2.07
SWD2YKL018W YIL134C-AQ45U18 67 aa2.14□□□□□ -2.07
SWD2YKL018W FKS3Q04952 1785 aa2.13□□□□□ -2.07
SWD2YKL018W RPL22AP05749 121 aaKnown RBP2.13□□□□□ -2.07
SWD2YKL018W PAU19P0CE85 124 aa2.13□□□□□ -2.07
SWD2YKL018W PAU3P25610 124 aa2.13□□□□□ -2.07
SWD2YKL018W YHR022CP38763 256 aa2.13□□□□□ -2.07
SWD2YKL018W HSP10P38910 106 aa2.13□□□□□ -2.07
SWD2YKL018W GCV3P39726 170 aaPredicted RBP2.13□□□□□ -2.07
SWD2YKL018W DCV1P43595 202 aa2.13□□□□□ -2.07
SWD2YKL018W CYT2Q00873 224 aa2.13□□□□□ -2.07
SWD2YKL018W YPR153WQ06537 140 aa2.13□□□□□ -2.07
SWD2YKL018W YDR034W-BQ6Q5X2 51 aa2.13□□□□□ -2.07
SWD2YKL018W YJL197C-AP0C5P0 93 aa2.12□□□□□ -2.07
SWD2YKL018W PAU24P38155 120 aa2.12□□□□□ -2.07
SWD2YKL018W YBR292CP38357 123 aa2.12□□□□□ -2.07
SWD2YKL018W YNL198CP40166 100 aa2.12□□□□□ -2.07
SWD2YKL018W ICS3P47034 131 aa2.12□□□□□ -2.07
SWD2YKL018W YGL149WP53116 101 aa2.12□□□□□ -2.07
SWD2YKL018W YPR013CQ12145 317 aa2.12□□□□□ -2.07
SWD2YKL018W PCC1Q3E833 88 aa2.12□□□□□ -2.07
SWD2YKL018W YNR034W-AQ3E841 98 aa2.12□□□□□ -2.07
SWD2YKL018W YLR236CA0A023PZG4 107 aa2.11□□□□□ -2.07
SWD2YKL018W RTC6O14464 93 aa2.11□□□□□ -2.07
SWD2YKL018W RPB7P34087 171 aa2.11□□□□□ -2.07
SWD2YKL018W PAU16P35994 123 aa2.11□□□□□ -2.07
SWD2YKL018W ATG8P38182 117 aaRIP-Chip data2.11□□□□□ -2.07not detected
SWD2YKL018W YIR020CP40575 100 aa2.11□□□□□ -2.07
SWD2YKL018W PAU15P40585 124 aa2.11□□□□□ -2.07
SWD2YKL018W YFL051CP43552 160 aa2.11□□□□□ -2.07
SWD2YKL018W MET31Q03081 177 aa2.11□□□□□ -2.07
SWD2YKL018W AVO2Q04749 426 aa2.11□□□□□ -2.07
SWD2YKL018W YDR381C-AQ3E6R5 114 aa2.11□□□□□ -2.07
SWD2YKL018W TY4B-HP0C2J7 1802 aa2.1□□□□□ -2.07
SWD2YKL018W TY4B-JP47024 1803 aa2.1□□□□□ -2.07
SWD2YKL018W VPS13Q07878 3144 aa2.1□□□□□ -2.07
SWD2YKL018W IMP2P46972 177 aa2.1□□□□□ -2.07
SWD2YKL018W MIC27P50945 234 aa2.1□□□□□ -2.07
SWD2YKL018W YDL157CQ12082 118 aa2.1□□□□□ -2.07
SWD2YKL018W APC1P53886 1748 aa2.1□□□□□ -2.07
SWD2YKL018W TAO3P40468 2376 aa2.1□□□□□ -2.07
SWD2YKL018W YBR209WP38311 105 aa2.09□□□□□ -2.07
SWD2YKL018W YIL014C-AQ02598 104 aa2.09□□□□□ -2.07
SWD2YKL018W YOL118CQ08259 102 aa2.09□□□□□ -2.07
SWD2YKL018W YPR145C-AQ2V2P0 78 aa2.09□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms