RNA–Protein interactions for RNA: YJR005W

APL1, Transcript of Beta-adaptin, yeast

Gene APL1, Length 2,103 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL1	YJR005W	ICY1	Q04329	127 aa		0.88	□□□□□ -2.27
APL1	YJR005W	SPG3	Q04398	127 aa	Predicted RBP	0.88	□□□□□ -2.27
APL1	YJR005W	YFR032C-B	Q8TGU2	87 aa		0.88	□□□□□ -2.27
APL1	YJR005W	STT4	P37297	1900 aa		0.88	□□□□□ -2.27
APL1	YJR005W	MDM35	O60200	86 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU1	P0CE88	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU14	P0CE89	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU6	P0CE90	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU18	P0CE91	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU8	P0CE92	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU11	P0CE93	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	YHR213W	P0CI67	198 aa		0.88	□□□□□ -2.27
APL1	YJR005W	SPS100	P13130	326 aa		0.88	□□□□□ -2.27
APL1	YJR005W	YBR209W	P38311	105 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU13	P38725	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	VTC1	P40046	129 aa	RIP-Chip data	0.88	□□□□□ -2.27	not detected
APL1	YJR005W	HUR1	P45820	110 aa		0.88	□□□□□ -2.27
APL1	YJR005W	CIS3	P47001	227 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU12	P53343	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	NRM1	P53718	249 aa		0.88	□□□□□ -2.27
APL1	YJR005W	SWT21	P53873	357 aa	Predicted RBP	0.88	□□□□□ -2.27
APL1	YJR005W	PAU10	Q03050	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PIR1	Q03178	341 aa		0.88	□□□□□ -2.27
APL1	YJR005W	MIX14	Q04341	121 aa		0.88	□□□□□ -2.27
APL1	YJR005W	LPP1	Q04396	274 aa		0.88	□□□□□ -2.27
APL1	YJR005W	FSH2	Q05015	223 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU20	Q08322	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	YPL261C	Q08976	102 aa		0.88	□□□□□ -2.27
APL1	YJR005W	PAU9	Q3E770	120 aa		0.88	□□□□□ -2.27
APL1	YJR005W	YOR381W-A	Q3E804	55 aa		0.88	□□□□□ -2.27
APL1	YJR005W	TDA8	Q6B2U8	126 aa		0.88	□□□□□ -2.27
APL1	YJR005W	NUP192	P47054	1683 aa		0.87	□□□□□ -2.27
APL1	YJR005W	RPL26A	P05743	127 aa	Known RBP	0.87	□□□□□ -2.27
APL1	YJR005W	RPS14A	P06367	137 aa	Known RBP	0.87	□□□□□ -2.27
APL1	YJR005W	ATP15	P21306	62 aa		0.87	□□□□□ -2.27
APL1	YJR005W	FYV5	P25585	152 aa		0.87	□□□□□ -2.27
APL1	YJR005W	RPB9	P27999	122 aa		0.87	□□□□□ -2.27
APL1	YJR005W	AGA2	P32781	87 aa		0.87	□□□□□ -2.27
APL1	YJR005W	YKR045C	P36138	183 aa		0.87	□□□□□ -2.27
APL1	YJR005W	PAU24	P38155	120 aa		0.87	□□□□□ -2.27
APL1	YJR005W	RPS14B	P39516	138 aa	Known RBP	0.87	□□□□□ -2.27
APL1	YJR005W	YAR068W	P39564	161 aa		0.87	□□□□□ -2.27
APL1	YJR005W	YEL028W	P39989	153 aa		0.87	□□□□□ -2.27
APL1	YJR005W	EDC2	P40023	145 aa	Predicted RBP	0.87	□□□□□ -2.27
APL1	YJR005W	YFL012W	P43580	148 aa		0.87	□□□□□ -2.27
APL1	YJR005W	PAU4	P53427	120 aa		0.87	□□□□□ -2.27
APL1	YJR005W	COX12	Q01519	83 aa		0.87	□□□□□ -2.27
APL1	YJR005W	PRM7	Q12459	698 aa		0.87	□□□□□ -2.27
APL1	YJR005W	YMR030W-A	Q3E760	96 aa		0.87	□□□□□ -2.27
APL1	YJR005W	UBR2	Q07963	1872 aa		0.87	□□□□□ -2.27
APL1	YJR005W	YAR023C	D6VPM8	179 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YMR316C-A	I2HB70	103 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YHR214C-D	P0CX93	97 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YCR025C	P25352	136 aa		0.86	□□□□□ -2.27
APL1	YJR005W	QCR10	P37299	77 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YSY6	P38374	65 aa		0.86	□□□□□ -2.27
APL1	YJR005W	IMP2	P46972	177 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YGL118C	P53132	145 aa		0.86	□□□□□ -2.27
APL1	YJR005W	CRH1	P53301	507 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YDR274C	P87283	123 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YIL014C-A	Q02598	104 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YHP1	Q04116	353 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YOL014W	Q08110	124 aa		0.86	□□□□□ -2.27
APL1	YJR005W	ATP20	Q12233	115 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YKL023C-A	Q2V2P3	75 aa		0.86	□□□□□ -2.27
APL1	YJR005W	RPS22B	Q3E7Y3	130 aa	Known RBP	0.86	□□□□□ -2.27
APL1	YJR005W	YBL008W-A	Q3E821	79 aa		0.86	□□□□□ -2.27
APL1	YJR005W	HKR1	P41809	1802 aa		0.86	□□□□□ -2.27
APL1	YJR005W	PIS1	P06197	220 aa	Known RBP	0.86	□□□□□ -2.27
APL1	YJR005W	RPS22A	P0C0W1	130 aa	Known RBP	0.86	□□□□□ -2.27
APL1	YJR005W	YLR156W	P0CE96	114 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YLR159W	P0CE97	114 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YLR161W	P0CE98	114 aa		0.86	□□□□□ -2.27
APL1	YJR005W	RPL23A	P0CX41	137 aa	Known RBP	0.86	□□□□□ -2.27
APL1	YJR005W	RPL23B	P0CX42	137 aa	Known RBP	0.86	□□□□□ -2.27
APL1	YJR005W	AIM4	P38305	123 aa	Predicted RBP	0.86	□□□□□ -2.27
APL1	YJR005W	YHR173C	P38864	112 aa		0.86	□□□□□ -2.27
APL1	YJR005W	TVP23	P38962	199 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YEL073C	P39974	107 aa		0.86	□□□□□ -2.27
APL1	YJR005W	MPC3	P53311	146 aa		0.86	□□□□□ -2.27
APL1	YJR005W	MIX17	Q03667	156 aa		0.86	□□□□□ -2.27
APL1	YJR005W	IRC23	Q08416	157 aa		0.86	□□□□□ -2.27
APL1	YJR005W	FYV12	Q08559	129 aa		0.86	□□□□□ -2.27
APL1	YJR005W	TIM22	Q12328	207 aa		0.86	□□□□□ -2.27
APL1	YJR005W	YOR020W-A	Q3E824	90 aa		0.86	□□□□□ -2.27
APL1	YJR005W	PMD1	P32634	1753 aa		0.86	□□□□□ -2.27
APL1	YJR005W	PFY1	P07274	126 aa		0.85	□□□□□ -2.27
APL1	YJR005W	RRT1	P38192	103 aa		0.85	□□□□□ -2.27
APL1	YJR005W	YFL051C	P43552	160 aa		0.85	□□□□□ -2.27
APL1	YJR005W	ECO1	P43605	281 aa		0.85	□□□□□ -2.27
APL1	YJR005W	YGL149W	P53116	101 aa		0.85	□□□□□ -2.27
APL1	YJR005W	BRP1	P53194	125 aa		0.85	□□□□□ -2.27
APL1	YJR005W	LIP1	Q03579	150 aa		0.85	□□□□□ -2.27
APL1	YJR005W	EMI1	Q04406	187 aa		0.85	□□□□□ -2.27
APL1	YJR005W	IRC19	Q07843	230 aa		0.85	□□□□□ -2.27
APL1	YJR005W	YOL118C	Q08259	102 aa		0.85	□□□□□ -2.27
APL1	YJR005W	YOR343C	Q12484	108 aa		0.85	□□□□□ -2.27
APL1	YJR005W	YKL018C-A	Q3E7A7	99 aa		0.85	□□□□□ -2.27
APL1	YJR005W	OST5	Q92316	86 aa		0.85	□□□□□ -2.27
APL1	YJR005W	FLO11	P08640	1367 aa		0.85	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 36 ms