RNA–Protein interactions for RNA: YHR055C

CUP1-2, Transcript of Metallothionein, yeastyeast

Gene CUP1-2, Length 186 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP1-2YHR055C PAM16P42949 149 aa-0.67□□□□□ -2.52
CUP1-2YHR055C YLR099W-AQ3E798 87 aa-0.67□□□□□ -2.52
CUP1-2YHR055C YPL038W-AQ3E7B4 63 aa-0.67□□□□□ -2.52
CUP1-2YHR055C YHR138CP38841 114 aaPredicted RBP-0.68□□□□□ -2.52
CUP1-2YHR055C YNL198CP40166 100 aa-0.68□□□□□ -2.52
CUP1-2YHR055C YGR164WP53291 111 aa-0.68□□□□□ -2.52
CUP1-2YHR055C YCR101CP25607 182 aa-0.69□□□□□ -2.52
CUP1-2YHR055C YAR029WP39549 74 aa-0.7□□□□□ -2.52
CUP1-2YHR055C YRF1-2P40105 1681 aa-0.71□□□□□ -2.52
CUP1-2YHR055C SPC2Q04969 178 aa-0.71□□□□□ -2.52
CUP1-2YHR055C TY1B-BLQ12490 1755 aa-0.71□□□□□ -2.52
CUP1-2YHR055C COX12Q01519 83 aa-0.72□□□□□ -2.52
CUP1-2YHR055C YLR419WQ06698 1435 aaKnown RBP-0.72□□□□□ -2.53
CUP1-2YHR055C YBR016WP38216 128 aa-0.74□□□□□ -2.53
CUP1-2YHR055C PAU15P40585 124 aa-0.74□□□□□ -2.53
CUP1-2YHR055C YFR009W-AP0C5M9 85 aa-0.76□□□□□ -2.53
CUP1-2YHR055C HUR1P45820 110 aa-0.77□□□□□ -2.53
CUP1-2YHR055C SGF11Q03067 99 aa-0.77□□□□□ -2.53
CUP1-2YHR055C RTR2Q12378 196 aa-0.77□□□□□ -2.53
CUP1-2YHR055C PAU16P35994 123 aa-0.78□□□□□ -2.53
CUP1-2YHR055C VMA21P41806 77 aa-0.78□□□□□ -2.53
CUP1-2YHR055C MRPL38P35996 138 aaPredicted RBP-0.79□□□□□ -2.54
CUP1-2YHR055C YLR042CQ07990 161 aa-0.79□□□□□ -2.54
CUP1-2YHR055C SRB6P32570 121 aa-0.8□□□□□ -2.54
CUP1-2YHR055C MRX7P53869 86 aa-0.8□□□□□ -2.54
CUP1-2YHR055C SSN2P38931 1420 aa-0.81□□□□□ -2.54
CUP1-2YHR055C YBR292CP38357 123 aa-0.82□□□□□ -2.54
CUP1-2YHR055C RPC10P40422 70 aa-0.82□□□□□ -2.54
CUP1-2YHR055C SWC7Q06707 132 aa-0.82□□□□□ -2.54
CUP1-2YHR055C APS2Q00381 147 aa-0.83□□□□□ -2.54
CUP1-2YHR055C ICY1Q04329 127 aa-0.83□□□□□ -2.54
CUP1-2YHR055C RSF2P46974 1380 aa-0.83□□□□□ -2.54
CUP1-2YHR055C SRB8P25648 1427 aa-0.85□□□□□ -2.55
CUP1-2YHR055C BUD23P25627 275 aaPredicted RBP-0.86□□□□□ -2.55
CUP1-2YHR055C YIR021W-AQ3E739 70 aa-0.87□□□□□ -2.55
CUP1-2YHR055C MRP17P28778 131 aa-0.89□□□□□ -2.55
CUP1-2YHR055C NTE1Q04958 1679 aa-0.9□□□□□ -2.55
CUP1-2YHR055C RSM18P40033 138 aa-0.9□□□□□ -2.55
CUP1-2YHR055C YCR095W-AQ3E787 52 aa-0.91□□□□□ -2.56
CUP1-2YHR055C CAT8P39113 1433 aa-0.91□□□□□ -2.56
CUP1-2YHR055C SNA2P56508 79 aa-0.92□□□□□ -2.56
CUP1-2YHR055C PAU20Q08322 120 aa-0.93□□□□□ -2.56
CUP1-2YHR055C BPT1P14772 1559 aa-0.94□□□□□ -2.56
CUP1-2YHR055C YIL134C-AQ45U18 67 aa-0.94□□□□□ -2.56
CUP1-2YHR055C YJR107C-AP0CT86 78 aa-0.95□□□□□ -2.56
CUP1-2YHR055C YRF1-1P0CX20 1796 aa-0.96□□□□□ -2.56
CUP1-2YHR055C YRF1-5P0CX21 1796 aa-0.96□□□□□ -2.56
CUP1-2YHR055C YRF1-8P0CX22 1796 aa-0.96□□□□□ -2.56
CUP1-2YHR055C RPL38P49167 78 aaKnown RBP-0.97□□□□□ -2.56
CUP1-2YHR055C YNR034W-AQ3E841 98 aa-0.97□□□□□ -2.56
CUP1-2YHR055C WIP1Q2V2P8 89 aa-0.98□□□□□ -2.57
CUP1-2YHR055C YOS1Q3E834 85 aa-0.98□□□□□ -2.57
CUP1-2YHR055C PAU6P0CE90 120 aa-0.99□□□□□ -2.57
CUP1-2YHR055C PAU18P0CE91 120 aa-0.99□□□□□ -2.57
CUP1-2YHR055C UTP20P35194 2493 aaKnown RBP-1.01□□□□□ -2.57
CUP1-2YHR055C LYS2P07702 1392 aa-1.01□□□□□ -2.57
CUP1-2YHR055C TY1B-LR3P0C2I6 1755 aaKnown RBP-1.02□□□□□ -2.57
CUP1-2YHR055C TY1B-PR3P0C2J1 1755 aaKnown RBP-1.02□□□□□ -2.57
CUP1-2YHR055C AIM19P40502 157 aa-1.02□□□□□ -2.57
CUP1-2YHR055C YCR108CQ3E819 63 aa-1.02□□□□□ -2.57
CUP1-2YHR055C MIC10Q96VH5 97 aa-1.02□□□□□ -2.57
CUP1-2YHR055C PMD1P32634 1753 aa-1.03□□□□□ -2.57
CUP1-2YHR055C SPP41P38904 1435 aa-1.03□□□□□ -2.57
CUP1-2YHR055C KRE5P22023 1365 aa-1.03□□□□□ -2.57
CUP1-2YHR055C PDX3P38075 228 aaKnown RBP-1.03□□□□□ -2.57
CUP1-2YHR055C RPS29AP41057 56 aaKnown RBP-1.03□□□□□ -2.57
CUP1-2YHR055C BUD4P47136 1447 aa-1.06□□□□□ -2.58
CUP1-2YHR055C YER039C-AP0CD97 72 aa-1.06□□□□□ -2.58
CUP1-2YHR055C PAU5P43575 122 aa-1.06□□□□□ -2.58
CUP1-2YHR055C YDR246W-AQ3E763 66 aa-1.06□□□□□ -2.58
CUP1-2YHR055C YBL071CP38185 102 aa-1.07□□□□□ -2.58
CUP1-2YHR055C PAU1P0CE88 120 aa-1.08□□□□□ -2.58
CUP1-2YHR055C PAU14P0CE89 120 aa-1.08□□□□□ -2.58
CUP1-2YHR055C PAU8P0CE92 120 aa-1.08□□□□□ -2.58
CUP1-2YHR055C PAU11P0CE93 120 aa-1.08□□□□□ -2.58
CUP1-2YHR055C ROX3P25046 220 aa-1.08□□□□□ -2.58
CUP1-2YHR055C PAU13P38725 120 aa-1.08□□□□□ -2.58
CUP1-2YHR055C YGR025WP53216 100 aa-1.08□□□□□ -2.58
CUP1-2YHR055C PAU10Q03050 120 aa-1.08□□□□□ -2.58
CUP1-2YHR055C YDR381C-AQ3E6R5 114 aa-1.08□□□□□ -2.58
CUP1-2YHR055C PAU9Q3E770 120 aa-1.08□□□□□ -2.58
CUP1-2YHR055C SEN1Q00416 2231 aaKnown RBP-1.08□□□□□ -2.58
CUP1-2YHR055C GNA1P43577 159 aaPredicted RBP-1.1□□□□□ -2.59
CUP1-2YHR055C TY1B-BRQ12193 1756 aa-1.11□□□□□ -2.59
CUP1-2YHR055C COX7P10174 60 aa-1.11□□□□□ -2.59
CUP1-2YHR055C UBC4P15731 148 aa-1.12□□□□□ -2.59
CUP1-2YHR055C UBC5P15732 148 aa-1.14□□□□□ -2.59
CUP1-2YHR055C MIX14Q04341 121 aa-1.14□□□□□ -2.59
CUP1-2YHR055C YMR103CQ04436 120 aa-1.15□□□□□ -2.59
CUP1-2YHR055C PAU4P53427 120 aa-1.16□□□□□ -2.6
CUP1-2YHR055C YMR090WQ04304 227 aaKnown RBP-1.16□□□□□ -2.6
CUP1-2YHR055C TY3B-IQ7LHG5 1498 aaKnown RBP-1.17□□□□□ -2.6
CUP1-2YHR055C YNL042W-BQ3E7Z2 85 aa-1.17□□□□□ -2.6
CUP1-2YHR055C Q0032Q9ZZX7 96 aa-1.17□□□□□ -2.6
CUP1-2YHR055C YOR304C-AO14468 76 aa-1.18□□□□□ -2.6
CUP1-2YHR055C HKR1P41809 1802 aa-1.18□□□□□ -2.6
CUP1-2YHR055C ECM12O13529 151 aa-1.19□□□□□ -2.6
CUP1-2YHR055C YMR001C-AQ8TGS9 76 aa-1.19□□□□□ -2.6
CUP1-2YHR055C YHL005CP38752 130 aa-1.21□□□□□ -2.6
CUP1-2YHR055C DNF3Q12674 1656 aa-1.21□□□□□ -2.6
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms