RNA–Protein interactions for RNA: YGR020C

VMA7, Transcript of Subunit F of the V1 peripheral membrane domain of V-ATPase, yeast

Gene VMA7, Length 357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA7	YGR020C	ZEO1	Q08245	113 aa		0.42	□□□□□ -2.34
VMA7	YGR020C	YCL048W-A	Q2V2Q2	79 aa		0.42	□□□□□ -2.34
VMA7	YGR020C	YGL041C-B	Q3E750	60 aa		0.42	□□□□□ -2.34
VMA7	YGR020C	RRT15	Q3E811	62 aa		0.42	□□□□□ -2.34
VMA7	YGR020C	COA6	Q3E846	104 aa		0.42	□□□□□ -2.34
VMA7	YGR020C	DNA2	P38859	1522 aa		0.42	□□□□□ -2.34
VMA7	YGR020C	TY4B-J	P47024	1803 aa		0.41	□□□□□ -2.34
VMA7	YGR020C	PAU5	P43575	122 aa		0.41	□□□□□ -2.34
VMA7	YGR020C	RSM19	P53733	91 aa	Predicted RBP	0.41	□□□□□ -2.34
VMA7	YGR020C	LSM6	Q06406	86 aa	Known RBP	0.41	□□□□□ -2.34
VMA7	YGR020C	YLR307C-A	Q3E825	87 aa		0.41	□□□□□ -2.34
VMA7	YGR020C	SEC16	P48415	2195 aa	Known RBP	0.4	□□□□□ -2.34
VMA7	YGR020C	LAA1	P39526	2014 aa		0.4	□□□□□ -2.34
VMA7	YGR020C	CAT8	P39113	1433 aa		0.4	□□□□□ -2.34
VMA7	YGR020C	REV3	P14284	1504 aa		0.4	□□□□□ -2.35
VMA7	YGR020C	ROX3	P25046	220 aa		0.4	□□□□□ -2.35
VMA7	YGR020C	YHL005C	P38752	130 aa		0.4	□□□□□ -2.35
VMA7	YGR020C	YHR138C	P38841	114 aa	Predicted RBP	0.4	□□□□□ -2.35
VMA7	YGR020C	YJR128W	P47162	119 aa		0.4	□□□□□ -2.35
VMA7	YGR020C	YOL118C	Q08259	102 aa		0.4	□□□□□ -2.35
VMA7	YGR020C	YCR075W-A	Q3E830	75 aa		0.4	□□□□□ -2.35
VMA7	YGR020C	YCL001W-B	Q96VH2	84 aa		0.4	□□□□□ -2.35
VMA7	YGR020C	YPK9	Q12697	1472 aa		0.4	□□□□□ -2.35
VMA7	YGR020C	BPT1	P14772	1559 aa		0.4	□□□□□ -2.35
VMA7	YGR020C	HMRA1	P0CY11	126 aa		0.39	□□□□□ -2.35
VMA7	YGR020C	MRPL38	P35996	138 aa	Predicted RBP	0.39	□□□□□ -2.35
VMA7	YGR020C	IMP2	P46972	177 aa		0.39	□□□□□ -2.35
VMA7	YGR020C	YOR034C-A	Q3E735	80 aa		0.39	□□□□□ -2.35
VMA7	YGR020C	YCR095W-A	Q3E787	52 aa		0.39	□□□□□ -2.35
VMA7	YGR020C	BNI1	P41832	1953 aa		0.39	□□□□□ -2.35
VMA7	YGR020C	BRR2	P32639	2163 aa	Known RBP	0.39	□□□□□ -2.35
VMA7	YGR020C	YRF1-3	P0CX14	1859 aa		0.38	□□□□□ -2.35
VMA7	YGR020C	YRF1-7	P0CX15	1859 aa		0.38	□□□□□ -2.35
VMA7	YGR020C	RSF2	P46974	1380 aa		0.38	□□□□□ -2.35
VMA7	YGR020C	AUA1	P32450	94 aa		0.38	□□□□□ -2.35
VMA7	YGR020C	SRB6	P32570	121 aa		0.38	□□□□□ -2.35
VMA7	YGR020C	EMC5	P40540	141 aa		0.38	□□□□□ -2.35
VMA7	YGR020C	MSL1	P40567	111 aa	Predicted RBP	0.38	□□□□□ -2.35
VMA7	YGR020C	YDR042C	Q03205	200 aa		0.38	□□□□□ -2.35
VMA7	YGR020C	YMR082C	Q04276	118 aa		0.38	□□□□□ -2.35
VMA7	YGR020C	YDR029W	Q12111	104 aa		0.38	□□□□□ -2.35
VMA7	YGR020C	YPL038W-A	Q3E7B4	63 aa		0.38	□□□□□ -2.35
VMA7	YGR020C	SEC7	P11075	2009 aa	Known RBP	0.38	□□□□□ -2.35
VMA7	YGR020C	POL2	P21951	2222 aa	Known RBP	0.37	□□□□□ -2.35
VMA7	YGR020C	PDR10	P51533	1564 aa		0.37	□□□□□ -2.35
VMA7	YGR020C	PAU6	P0CE90	120 aa		0.37	□□□□□ -2.35
VMA7	YGR020C	PAU18	P0CE91	120 aa		0.37	□□□□□ -2.35
VMA7	YGR020C	GCV3	P39726	170 aa	Predicted RBP	0.37	□□□□□ -2.35
VMA7	YGR020C	YIL086C	P40503	102 aa		0.37	□□□□□ -2.35
VMA7	YGR020C	COX12	Q01519	83 aa		0.37	□□□□□ -2.35
VMA7	YGR020C	ICY1	Q04329	127 aa		0.37	□□□□□ -2.35
VMA7	YGR020C	YGL194C-A	Q2V2P6	80 aa		0.37	□□□□□ -2.35
VMA7	YGR020C	COX19	Q3E731	98 aa		0.37	□□□□□ -2.35
VMA7	YGR020C	YRF1-6	P53819	1859 aa		0.37	□□□□□ -2.35
VMA7	YGR020C	SRB8	P25648	1427 aa		0.37	□□□□□ -2.35
VMA7	YGR020C	YLR157W-E	P0CF00	54 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	YBL071C	P38185	102 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	SHU1	P38751	150 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	MPC2	P38857	129 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	SNU13	P39990	126 aa	Known RBP	0.36	□□□□□ -2.35
VMA7	YGR020C	RSM18	P40033	138 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	SPC1	P46965	94 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	SNA2	P56508	79 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	NHP10	Q03435	203 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	SCP1	Q08873	200 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	YMR175W-A	Q3E766	64 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	YNR034W-A	Q3E841	98 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	SKI3	P17883	1432 aa	Known RBP	0.36	□□□□□ -2.35
VMA7	YGR020C	SSN2	P38931	1420 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	YSP2	Q06681	1438 aa		0.36	□□□□□ -2.35
VMA7	YGR020C	POL1	P13382	1468 aa		0.35	□□□□□ -2.35
VMA7	YGR020C	ECM12	O13529	151 aa		0.35	□□□□□ -2.35
VMA7	YGR020C	RPS11A	P0CX47	156 aa	Known RBP	0.35	□□□□□ -2.35
VMA7	YGR020C	RPS11B	P0CX48	156 aa	Known RBP	0.35	□□□□□ -2.35
VMA7	YGR020C	MRP17	P28778	131 aa		0.35	□□□□□ -2.35
VMA7	YGR020C	MRX7	P53869	86 aa		0.35	□□□□□ -2.35
VMA7	YGR020C	SUS1	Q6WNK7	96 aa		0.35	□□□□□ -2.35
VMA7	YGR020C	LTE1	P07866	1435 aa		0.34	□□□□□ -2.36
VMA7	YGR020C	PAU8	P0CE92	120 aa		0.34	□□□□□ -2.36
VMA7	YGR020C	PAU11	P0CE93	120 aa		0.34	□□□□□ -2.36
VMA7	YGR020C	YBR292C	P38357	123 aa		0.34	□□□□□ -2.36
VMA7	YGR020C	PAU13	P38725	120 aa		0.34	□□□□□ -2.36
VMA7	YGR020C	AIM19	P40502	157 aa		0.34	□□□□□ -2.36
VMA7	YGR020C	PAU4	P53427	120 aa		0.34	□□□□□ -2.36
VMA7	YGR020C	PAU10	Q03050	120 aa		0.34	□□□□□ -2.36
VMA7	YGR020C	PAU9	Q3E770	120 aa		0.34	□□□□□ -2.36
VMA7	YGR020C	URB1	P34241	1764 aa	Known RBP	0.34	□□□□□ -2.36
VMA7	YGR020C	RPA190	P10964	1664 aa	Known RBP	0.33	□□□□□ -2.36
VMA7	YGR020C	GDB1	Q06625	1536 aa		0.33	□□□□□ -2.36
VMA7	YGR020C	NHP2	P32495	156 aa	Predicted RBP	0.33	□□□□□ -2.36
VMA7	YGR020C	PAU20	Q08322	120 aa		0.33	□□□□□ -2.36
VMA7	YGR020C	YBR072C-A	Q3E794	53 aa		0.33	□□□□□ -2.36
VMA7	YGR020C	MYO1	P08964	1928 aa		0.32	□□□□□ -2.36
VMA7	YGR020C	PAU1	P0CE88	120 aa		0.32	□□□□□ -2.36
VMA7	YGR020C	PAU14	P0CE89	120 aa		0.32	□□□□□ -2.36
VMA7	YGR020C	YHR173C	P38864	112 aa		0.32	□□□□□ -2.36
VMA7	YGR020C	BSC4	P53841	131 aa		0.32	□□□□□ -2.36
VMA7	YGR020C	YDR010C	Q12426	110 aa		0.32	□□□□□ -2.36
VMA7	YGR020C	NTE1	Q04958	1679 aa		0.32	□□□□□ -2.36
VMA7	YGR020C	TY4B-H	P0C2J7	1802 aa		0.31	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 35.1 ms