RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W MIC10Q96VH5 97 aa0.1□□□□□ -2.39
VPS52YDR484W KRE5P22023 1365 aa0.1□□□□□ -2.39
VPS52YDR484W TOP2P06786 1428 aaKnown RBP0.09□□□□□ -2.39
VPS52YDR484W YOR304C-AO14468 76 aa0.09□□□□□ -2.39
VPS52YDR484W PAU6P0CE90 120 aa0.09□□□□□ -2.39
VPS52YDR484W PAU18P0CE91 120 aa0.09□□□□□ -2.39
VPS52YDR484W IMP2P46972 177 aa0.09□□□□□ -2.39
VPS52YDR484W LYS2P07702 1392 aa0.09□□□□□ -2.39
VPS52YDR484W CCW14O13547 238 aa0.09□□□□□ -2.4
VPS52YDR484W YER137CP40083 148 aaKnown RBP0.09□□□□□ -2.4
VPS52YDR484W YOL118CQ08259 102 aa0.09□□□□□ -2.4
VPS52YDR484W YRF1-1P0CX20 1796 aa0.09□□□□□ -2.4
VPS52YDR484W YRF1-5P0CX21 1796 aa0.09□□□□□ -2.4
VPS52YDR484W YRF1-8P0CX22 1796 aa0.09□□□□□ -2.4
VPS52YDR484W YPK9Q12697 1472 aa0.08□□□□□ -2.4
VPS52YDR484W YHR138CP38841 114 aaPredicted RBP0.08□□□□□ -2.4
VPS52YDR484W YIL086CP40503 102 aa0.08□□□□□ -2.4
VPS52YDR484W GTT1P40582 234 aa0.08□□□□□ -2.4
VPS52YDR484W YPL038W-AQ3E7B4 63 aa0.08□□□□□ -2.4
VPS52YDR484W SPP41P38904 1435 aa0.08□□□□□ -2.4
VPS52YDR484W YLR419WQ06698 1435 aaKnown RBP0.08□□□□□ -2.4
VPS52YDR484W HUR1P45820 110 aa0.07□□□□□ -2.4
VPS52YDR484W RSM19P53733 91 aaPredicted RBP0.07□□□□□ -2.4
VPS52YDR484W YCR095W-AQ3E787 52 aa0.07□□□□□ -2.4
VPS52YDR484W YBR072C-AQ3E794 53 aa0.07□□□□□ -2.4
VPS52YDR484W RRT15Q3E811 62 aa0.07□□□□□ -2.4
VPS52YDR484W YNR034W-AQ3E841 98 aa0.07□□□□□ -2.4
VPS52YDR484W RIM15P43565 1770 aa0.07□□□□□ -2.4
VPS52YDR484W RPS11AP0CX47 156 aaKnown RBP0.07□□□□□ -2.4
VPS52YDR484W RPS11BP0CX48 156 aaKnown RBP0.07□□□□□ -2.4
VPS52YDR484W YCR101CP25607 182 aa0.07□□□□□ -2.4
VPS52YDR484W RPC10P40422 70 aa0.07□□□□□ -2.4
VPS52YDR484W MRX7P53869 86 aa0.07□□□□□ -2.4
VPS52YDR484W YNL190WP53872 204 aa0.07□□□□□ -2.4
VPS52YDR484W YMR103CQ04436 120 aa0.07□□□□□ -2.4
VPS52YDR484W YBL071CP38185 102 aa0.06□□□□□ -2.4
VPS52YDR484W MPC2P38857 129 aa0.06□□□□□ -2.4
VPS52YDR484W SPC1P46965 94 aa0.06□□□□□ -2.4
VPS52YDR484W MRP17P28778 131 aa0.05□□□□□ -2.4
VPS52YDR484W MRPL38P35996 138 aaPredicted RBP0.05□□□□□ -2.4
VPS52YDR484W TY1B-BLQ12490 1755 aa0.05□□□□□ -2.4
VPS52YDR484W UBC4P15731 148 aa0.05□□□□□ -2.4
VPS52YDR484W GNA1P43577 159 aaPredicted RBP0.05□□□□□ -2.4
VPS52YDR484W YGR164WP53291 111 aa0.05□□□□□ -2.4
VPS52YDR484W SNA2P56508 79 aa0.05□□□□□ -2.4
VPS52YDR484W NHP10Q03435 203 aa0.05□□□□□ -2.4
VPS52YDR484W YCL048W-AQ2V2Q2 79 aa0.05□□□□□ -2.4
VPS52YDR484W YRF1-2P40105 1681 aa0.05□□□□□ -2.4
VPS52YDR484W SSN2P38931 1420 aa0.04□□□□□ -2.4
VPS52YDR484W BUD4P47136 1447 aa0.04□□□□□ -2.4
VPS52YDR484W PAU8P0CE92 120 aa0.04□□□□□ -2.4
VPS52YDR484W PAU11P0CE93 120 aa0.04□□□□□ -2.4
VPS52YDR484W PAU13P38725 120 aa0.04□□□□□ -2.4
VPS52YDR484W VMA21P41806 77 aa0.04□□□□□ -2.4
VPS52YDR484W PAU4P53427 120 aa0.04□□□□□ -2.4
VPS52YDR484W PAU10Q03050 120 aa0.04□□□□□ -2.4
VPS52YDR484W ICY1Q04329 127 aa0.04□□□□□ -2.4
VPS52YDR484W PAU9Q3E770 120 aa0.04□□□□□ -2.4
VPS52YDR484W CAT8P39113 1433 aa0.04□□□□□ -2.4
VPS52YDR484W SRB6P32570 121 aa0.03□□□□□ -2.4
VPS52YDR484W RPS12P48589 143 aaKnown RBP0.03□□□□□ -2.4
VPS52YDR484W PAU20Q08322 120 aa0.03□□□□□ -2.4
VPS52YDR484W YOR289WQ12012 251 aaPredicted RBP0.03□□□□□ -2.4
VPS52YDR484W YOS1Q3E834 85 aa0.03□□□□□ -2.4
VPS52YDR484W SRB8P25648 1427 aa0.03□□□□□ -2.4
VPS52YDR484W PDR11P40550 1411 aa0.03□□□□□ -2.4
VPS52YDR484W YFR009W-AP0C5M9 85 aa0.03□□□□□ -2.41
VPS52YDR484W YJR107C-AP0CT86 78 aa0.03□□□□□ -2.41
VPS52YDR484W RSM18P40033 138 aa0.03□□□□□ -2.41
VPS52YDR484W YMR090WQ04304 227 aaKnown RBP0.03□□□□□ -2.41
VPS52YDR484W TY3B-IQ7LHG5 1498 aaKnown RBP0.02□□□□□ -2.41
VPS52YDR484W UBC5P15732 148 aa0.02□□□□□ -2.41
VPS52YDR484W KSH1Q8TGJ3 72 aa0.02□□□□□ -2.41
VPS52YDR484W PAU1P0CE88 120 aa0.01□□□□□ -2.41
VPS52YDR484W PAU14P0CE89 120 aa0.01□□□□□ -2.41
VPS52YDR484W YNL198CP40166 100 aa0.01□□□□□ -2.41
VPS52YDR484W COX12Q01519 83 aa0.01□□□□□ -2.41
VPS52YDR484W COX19Q3E731 98 aa0.01□□□□□ -2.41
VPS52YDR484W TSC11P40061 1430 aa0.01□□□□□ -2.41
VPS52YDR484W NTE1Q04958 1679 aa0.01□□□□□ -2.41
VPS52YDR484W TY1B-BRQ12193 1756 aa0.01□□□□□ -2.41
VPS52YDR484W HMRA1P0CY11 126 aa0.01□□□□□ -2.41
VPS52YDR484W YBR016WP38216 128 aa0.01□□□□□ -2.41
VPS52YDR484W Q0032Q9ZZX7 96 aa0.01□□□□□ -2.41
VPS52YDR484W BPT1P14772 1559 aa0.01□□□□□ -2.41
VPS52YDR484W RPA190P10964 1664 aaKnown RBP0□□□□□ -2.41
VPS52YDR484W YBR090CP38253 122 aa0□□□□□ -2.41
VPS52YDR484W YIL134C-AQ45U18 67 aa0□□□□□ -2.41
VPS52YDR484W EMC5P40540 141 aa-0.01□□□□□ -2.41
VPS52YDR484W MIX14Q04341 121 aa-0.01□□□□□ -2.41
VPS52YDR484W SWC7Q06707 132 aa-0.01□□□□□ -2.41
VPS52YDR484W RSF2P46974 1380 aa-0.02□□□□□ -2.41
VPS52YDR484W YBR292CP38357 123 aa-0.02□□□□□ -2.41
VPS52YDR484W YBR201C-AQ2V2Q3 67 aa-0.02□□□□□ -2.41
VPS52YDR484W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.02□□□□□ -2.41
VPS52YDR484W TY1B-PR2P0C2J0 1756 aa-0.02□□□□□ -2.41
VPS52YDR484W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.02□□□□□ -2.41
VPS52YDR484W DNF3Q12674 1656 aa-0.03□□□□□ -2.41
VPS52YDR484W NHP2P32495 156 aaPredicted RBP-0.03□□□□□ -2.41
VPS52YDR484W RGI1P40043 161 aaPredicted RBP-0.03□□□□□ -2.41
Retrieved 100 of 5,963 RNA–protein pairs in 57.4 ms