RNA–Protein interactions for RNA: YDR407C

TRS120, Transcript of Component of transport protein particle (TRAPP) complex II, yeastyeast

Gene TRS120, Length 3,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS120YDR407C SPG4Q04438 115 aa2.65□□□□□ -1.99
TRS120YDR407C YAR029WP39549 74 aa2.64□□□□□ -1.99
TRS120YDR407C SNU13P39990 126 aaKnown RBP2.64□□□□□ -1.99
TRS120YDR407C YOL085CQ99345 113 aa2.64□□□□□ -1.99
TRS120YDR407C PEX17P40155 199 aa2.64□□□□□ -1.99
TRS120YDR407C IRC25Q07951 179 aa2.64□□□□□ -1.99
TRS120YDR407C JID1Q12350 301 aa2.64□□□□□ -1.99
TRS120YDR407C RPA12P32529 125 aaKnown RBP2.64□□□□□ -1.99
TRS120YDR407C YPT53P36019 220 aa2.64□□□□□ -1.99
TRS120YDR407C YBR219CP38317 127 aa2.64□□□□□ -1.99
TRS120YDR407C MIG3P39943 394 aa2.64□□□□□ -1.99
TRS120YDR407C YOR008C-AQ3E7B9 74 aa2.64□□□□□ -1.99
TRS120YDR407C RPS11AP0CX47 156 aaKnown RBP2.63□□□□□ -1.99
TRS120YDR407C RPS11BP0CX48 156 aaKnown RBP2.63□□□□□ -1.99
TRS120YDR407C EOS1P53938 366 aa2.63□□□□□ -1.99
TRS120YDR407C UGX2P32772 223 aa2.63□□□□□ -1.99
TRS120YDR407C KRE9P39005 276 aa2.63□□□□□ -1.99
TRS120YDR407C UBC7Q02159 165 aa2.63□□□□□ -1.99
TRS120YDR407C RPL29P05747 59 aaPredicted RBP2.63□□□□□ -1.99
TRS120YDR407C RPL32P38061 130 aaKnown RBP2.63□□□□□ -1.99
TRS120YDR407C YFR057WP43625 151 aa2.63□□□□□ -1.99
TRS120YDR407C OST2P46964 130 aa2.63□□□□□ -1.99
TRS120YDR407C SHH4Q06236 168 aa2.63□□□□□ -1.99
TRS120YDR407C TMC1Q08422 150 aaPredicted RBP2.63□□□□□ -1.99
TRS120YDR407C YAL063C-AQ3E791 96 aa2.63□□□□□ -1.99
TRS120YDR407C YAL065CO13511 128 aa2.62□□□□□ -1.99
TRS120YDR407C COX14P39103 70 aa2.62□□□□□ -1.99
TRS120YDR407C YER181CP40097 107 aa2.62□□□□□ -1.99
TRS120YDR407C YPL261CQ08976 102 aa2.62□□□□□ -1.99
TRS120YDR407C MSN1P22148 382 aa2.62□□□□□ -1.99
TRS120YDR407C SHU1P38751 150 aa2.62□□□□□ -1.99
TRS120YDR407C YEL008WP40001 126 aa2.62□□□□□ -1.99
TRS120YDR407C RRG8Q06109 277 aa2.62□□□□□ -1.99
TRS120YDR407C QCR8P08525 94 aa2.61□□□□□ -1.99
TRS120YDR407C ELC1Q03071 99 aa2.61□□□□□ -1.99
TRS120YDR407C YER121WP40076 114 aa2.61□□□□□ -1.99
TRS120YDR407C YDL241WQ07738 123 aa2.61□□□□□ -1.99
TRS120YDR407C PRM7Q12459 698 aa2.61□□□□□ -1.99
TRS120YDR407C YLR307C-AQ3E825 87 aa2.61□□□□□ -1.99
TRS120YDR407C TAO3P40468 2376 aa2.61□□□□□ -1.99
TRS120YDR407C ADH1P00330 348 aaKnown RBP2.61□□□□□ -1.99
TRS120YDR407C SPC29P33419 253 aa2.61□□□□□ -1.99
TRS120YDR407C YDR119W-AQ2V2P9 66 aa2.61□□□□□ -1.99
TRS120YDR407C TOA2P32774 122 aa2.6□□□□□ -1.99
TRS120YDR407C YER135CP40082 130 aa2.6□□□□□ -1.99
TRS120YDR407C YDR246W-AQ3E763 66 aa2.6□□□□□ -1.99
TRS120YDR407C SLO1Q3E784 85 aa2.6□□□□□ -1.99
TRS120YDR407C YFL041W-AQ3E817 63 aa2.6□□□□□ -1.99
TRS120YDR407C RPR2P40571 144 aa2.6□□□□□ -1.99
TRS120YDR407C DIA1P54005 336 aa2.6□□□□□ -1.99
TRS120YDR407C GCN1P33892 2672 aaKnown RBP2.6□□□□□ -1.99
TRS120YDR407C ATP15P21306 62 aa2.6□□□□□ -1.99
TRS120YDR407C RGM1Q00453 211 aa2.6□□□□□ -1.99
TRS120YDR407C AIM19P40502 157 aa2.59□□□□□ -1.99
TRS120YDR407C YOR020W-AQ3E824 90 aa2.59□□□□□ -1.99
TRS120YDR407C ARC15P40518 154 aaRIP-Chip data2.59□□□□□ -1.99not detected
TRS120YDR407C YIA6P40556 373 aa2.59□□□□□ -1.99
TRS120YDR407C DUO1P53168 247 aaKnown RBP2.59□□□□□ -1.99
TRS120YDR407C YMR181CQ03231 154 aa2.59□□□□□ -1.99
TRS120YDR407C RUB1Q03919 77 aa2.59□□□□□ -1.99
TRS120YDR407C AIR2Q12476 344 aaKnown RBP2.59□□□□□ -1.99
TRS120YDR407C YCL021W-AQ96VH3 125 aa2.59□□□□□ -2
TRS120YDR407C STF1P01098 86 aa2.58□□□□□ -2
TRS120YDR407C ATP23P53722 227 aa2.58□□□□□ -2
TRS120YDR407C YGR240C-AQ3E786 66 aa2.58□□□□□ -2
TRS120YDR407C YIL002W-AQ3E7Z5 69 aa2.58□□□□□ -2
TRS120YDR407C MPC2P38857 129 aa2.58□□□□□ -2
TRS120YDR407C SVP26P38869 228 aa2.58□□□□□ -2
TRS120YDR407C YMR295CQ03559 197 aa2.58□□□□□ -2
TRS120YDR407C SPO24Q3E752 67 aa2.58□□□□□ -2
TRS120YDR407C RPL2AP0CX45 254 aaKnown RBP2.58□□□□□ -2
TRS120YDR407C RPL2BP0CX46 254 aaKnown RBP2.58□□□□□ -2
TRS120YDR407C NRG2P38082 220 aa2.58□□□□□ -2
TRS120YDR407C YCR075W-AQ3E830 75 aa2.58□□□□□ -2
TRS120YDR407C YCR085WP25650 117 aa2.57□□□□□ -2
TRS120YDR407C YPR117WQ06116 2489 aa2.57□□□□□ -2
TRS120YDR407C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.57□□□□□ -2not detected
TRS120YDR407C PPT2Q12036 173 aa2.57□□□□□ -2
TRS120YDR407C WIP1Q2V2P8 89 aa2.57□□□□□ -2
TRS120YDR407C YMR122W-AQ3E842 84 aa2.57□□□□□ -2
TRS120YDR407C RPL43AP0CX25 92 aaKnown RBP2.57□□□□□ -2
TRS120YDR407C RPL43BP0CX26 92 aa2.57□□□□□ -2
TRS120YDR407C MLF3P32047 452 aa2.57□□□□□ -2
TRS120YDR407C YNL190WP53872 204 aa2.57□□□□□ -2
TRS120YDR407C YLL066W-BQ8TGJ7 56 aa2.57□□□□□ -2
TRS120YDR407C RPP2AP05319 106 aaKnown RBP2.56□□□□□ -2
TRS120YDR407C YER085CP40058 173 aa2.56□□□□□ -2
TRS120YDR407C RPL33AP05744 107 aaKnown RBP2.56□□□□□ -2
TRS120YDR407C RPL33BP41056 107 aaKnown RBP2.56□□□□□ -2
TRS120YDR407C YPS5P53057 165 aa2.56□□□□□ -2
TRS120YDR407C TOS8P53147 276 aa2.56□□□□□ -2
TRS120YDR407C NHP2P32495 156 aaPredicted RBP2.56□□□□□ -2
TRS120YDR407C CAX4P53223 239 aa2.56□□□□□ -2
TRS120YDR407C MID2P36027 376 aa2.55□□□□□ -2
TRS120YDR407C ERG28P40030 148 aa2.55□□□□□ -2
TRS120YDR407C CWP2P43497 92 aa2.55□□□□□ -2
TRS120YDR407C SKI6P46948 246 aaPredicted RBP2.55□□□□□ -2
TRS120YDR407C VAM10Q08474 114 aa2.55□□□□□ -2
TRS120YDR407C YDR274CP87283 123 aa2.54□□□□□ -2
TRS120YDR407C RPL28P02406 149 aaKnown RBP2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 63.7 ms