RNA–Protein interactions for RNA: YDR299W

BFR2, Transcript of Component of the SSU and 90S preribosomes, yeastyeast

Gene BFR2, Length 1,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BFR2YDR299W YLR099W-AQ3E798 87 aa0.05□□□□□ -2.4
BFR2YDR299W YLR365WQ7LIF2 110 aa0.05□□□□□ -2.4
BFR2YDR299W POL2P21951 2222 aaKnown RBP0.05□□□□□ -2.4
BFR2YDR299W TY1B-BLQ12490 1755 aa0.05□□□□□ -2.4
BFR2YDR299W CCW14O13547 238 aa0.05□□□□□ -2.4
BFR2YDR299W YCR101CP25607 182 aa0.05□□□□□ -2.4
BFR2YDR299W MRP17P28778 131 aa0.05□□□□□ -2.4
BFR2YDR299W YNL198CP40166 100 aa0.05□□□□□ -2.4
BFR2YDR299W SNA2P56508 79 aa0.05□□□□□ -2.4
BFR2YDR299W YOR097CQ12274 175 aaPredicted RBP0.05□□□□□ -2.4
BFR2YDR299W YRF1-2P40105 1681 aa0.04□□□□□ -2.4
BFR2YDR299W YLR255CO13574 117 aa0.04□□□□□ -2.4
BFR2YDR299W RPS11AP0CX47 156 aaKnown RBP0.04□□□□□ -2.4
BFR2YDR299W RPS11BP0CX48 156 aaKnown RBP0.04□□□□□ -2.4
BFR2YDR299W PAU24P38155 120 aa0.04□□□□□ -2.4
BFR2YDR299W YBR292CP38357 123 aa0.04□□□□□ -2.4
BFR2YDR299W YIR020CP40575 100 aa0.04□□□□□ -2.4
BFR2YDR299W HUR1P45820 110 aa0.04□□□□□ -2.4
BFR2YDR299W SGF11Q03067 99 aa0.04□□□□□ -2.4
BFR2YDR299W YLR419WQ06698 1435 aaKnown RBP0.04□□□□□ -2.4
BFR2YDR299W PAU2P32612 120 aa0.03□□□□□ -2.4
BFR2YDR299W PDX3P38075 228 aaKnown RBP0.03□□□□□ -2.4
BFR2YDR299W YAR029WP39549 74 aa0.03□□□□□ -2.4
BFR2YDR299W PAU15P40585 124 aa0.03□□□□□ -2.4
BFR2YDR299W MRX7P53869 86 aa0.03□□□□□ -2.4
BFR2YDR299W PAU20Q08322 120 aa0.03□□□□□ -2.4
BFR2YDR299W NTE1Q04958 1679 aa0.03□□□□□ -2.4
BFR2YDR299W PAU16P35994 123 aa0.02□□□□□ -2.41
BFR2YDR299W YLR042CQ07990 161 aa0.02□□□□□ -2.41
BFR2YDR299W WIP1Q2V2P8 89 aa0.02□□□□□ -2.41
BFR2YDR299W YIR021W-AQ3E739 70 aa0.02□□□□□ -2.41
BFR2YDR299W SRB8P25648 1427 aa0.02□□□□□ -2.41
BFR2YDR299W YFR009W-AP0C5M9 85 aa0.02□□□□□ -2.41
BFR2YDR299W RPL38P49167 78 aaKnown RBP0.02□□□□□ -2.41
BFR2YDR299W ICY1Q04329 127 aa0.02□□□□□ -2.41
BFR2YDR299W YIL134C-AQ45U18 67 aa0.02□□□□□ -2.41
BFR2YDR299W SPP41P38904 1435 aa0.01□□□□□ -2.41
BFR2YDR299W SSN2P38931 1420 aa0.01□□□□□ -2.41
BFR2YDR299W YRF1-1P0CX20 1796 aa0.01□□□□□ -2.41
BFR2YDR299W YRF1-5P0CX21 1796 aa0.01□□□□□ -2.41
BFR2YDR299W YRF1-8P0CX22 1796 aa0.01□□□□□ -2.41
BFR2YDR299W AIM19P40502 157 aa0.01□□□□□ -2.41
BFR2YDR299W YCR095W-AQ3E787 52 aa0.01□□□□□ -2.41
BFR2YDR299W PAU1P0CE88 120 aa0□□□□□ -2.41
BFR2YDR299W PAU14P0CE89 120 aa0□□□□□ -2.41
BFR2YDR299W PAU6P0CE90 120 aa0□□□□□ -2.41
BFR2YDR299W PAU18P0CE91 120 aa0□□□□□ -2.41
BFR2YDR299W PAU8P0CE92 120 aa0□□□□□ -2.41
BFR2YDR299W PAU11P0CE93 120 aa0□□□□□ -2.41
BFR2YDR299W BUD23P25627 275 aaPredicted RBP0□□□□□ -2.41
BFR2YDR299W PAU13P38725 120 aa0□□□□□ -2.41
BFR2YDR299W RSF2P46974 1380 aa0□□□□□ -2.41
BFR2YDR299W PAU10Q03050 120 aa0□□□□□ -2.41
BFR2YDR299W PAU9Q3E770 120 aa0□□□□□ -2.41
BFR2YDR299W YOS1Q3E834 85 aa0□□□□□ -2.41
BFR2YDR299W YJR107C-AP0CT86 78 aa-0.01□□□□□ -2.41
BFR2YDR299W MRPL38P35996 138 aaPredicted RBP-0.01□□□□□ -2.41
BFR2YDR299W RSM18P40033 138 aa-0.01□□□□□ -2.41
BFR2YDR299W YDR210WQ03482 75 aa-0.01□□□□□ -2.41
BFR2YDR299W TY1B-LR3P0C2I6 1755 aaKnown RBP-0.01□□□□□ -2.41
BFR2YDR299W TY1B-PR3P0C2J1 1755 aaKnown RBP-0.01□□□□□ -2.41
BFR2YDR299W BUD4P47136 1447 aa-0.01□□□□□ -2.41
BFR2YDR299W YOR304C-AO14468 76 aa-0.02□□□□□ -2.41
BFR2YDR299W COX7P10174 60 aa-0.02□□□□□ -2.41
BFR2YDR299W RPC10P40422 70 aa-0.02□□□□□ -2.41
BFR2YDR299W EMC5P40540 141 aa-0.02□□□□□ -2.41
BFR2YDR299W GNA1P43577 159 aaPredicted RBP-0.02□□□□□ -2.41
BFR2YDR299W YMR090WQ04304 227 aaKnown RBP-0.02□□□□□ -2.41
BFR2YDR299W TY1B-BRQ12193 1756 aa-0.02□□□□□ -2.41
BFR2YDR299W YBR016WP38216 128 aa-0.02□□□□□ -2.41
BFR2YDR299W PAU4P53427 120 aa-0.02□□□□□ -2.41
BFR2YDR299W BPT1P14772 1559 aa-0.03□□□□□ -2.41
BFR2YDR299W YNR034W-AQ3E841 98 aa-0.03□□□□□ -2.41
BFR2YDR299W LYS2P07702 1392 aa-0.04□□□□□ -2.42
BFR2YDR299W KRE5P22023 1365 aa-0.04□□□□□ -2.42
BFR2YDR299W ROX3P25046 220 aa-0.04□□□□□ -2.42
BFR2YDR299W YBL071CP38185 102 aa-0.04□□□□□ -2.42
BFR2YDR299W RGI1P40043 161 aaPredicted RBP-0.04□□□□□ -2.42
BFR2YDR299W MIX14Q04341 121 aa-0.04□□□□□ -2.42
BFR2YDR299W UBC5P15732 148 aa-0.05□□□□□ -2.42
BFR2YDR299W TOM6P33448 61 aa-0.05□□□□□ -2.42
BFR2YDR299W SNU13P39990 126 aaKnown RBP-0.05□□□□□ -2.42
BFR2YDR299W YDR381C-AQ3E6R5 114 aa-0.05□□□□□ -2.42
BFR2YDR299W MIC10Q96VH5 97 aa-0.05□□□□□ -2.42
BFR2YDR299W Q0032Q9ZZX7 96 aa-0.05□□□□□ -2.42
BFR2YDR299W CAT8P39113 1433 aa-0.05□□□□□ -2.42
BFR2YDR299W HKR1P41809 1802 aa-0.05□□□□□ -2.42
BFR2YDR299W UTP20P35194 2493 aaKnown RBP-0.05□□□□□ -2.42
BFR2YDR299W TY3B-IQ7LHG5 1498 aaKnown RBP-0.05□□□□□ -2.42
BFR2YDR299W YER039C-AP0CD97 72 aa-0.05□□□□□ -2.42
BFR2YDR299W UBC4P15731 148 aa-0.05□□□□□ -2.42
BFR2YDR299W YHL005CP38752 130 aa-0.05□□□□□ -2.42
BFR2YDR299W PAU5P43575 122 aa-0.05□□□□□ -2.42
BFR2YDR299W RPS12P48589 143 aaKnown RBP-0.05□□□□□ -2.42
BFR2YDR299W YMR103CQ04436 120 aa-0.05□□□□□ -2.42
BFR2YDR299W YNL042W-BQ3E7Z2 85 aa-0.05□□□□□ -2.42
BFR2YDR299W GEA1P47102 1408 aaPredicted RBP-0.06□□□□□ -2.42
BFR2YDR299W TY1B-PR2P0C2J0 1756 aa-0.06□□□□□ -2.42
BFR2YDR299W MDS3P53094 1487 aa-0.06□□□□□ -2.42
BFR2YDR299W YHR214C-DP0CX93 97 aa-0.06□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms