RNA–Protein interactions for RNA: YDR179C

CSN9, Transcript of Subunit of the Cop9 signalosome, yeast

Gene CSN9, Length 489 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSN9	YDR179C	PAU19	P0CE85	124 aa		-1.57	□□□□□ -2.66
CSN9	YDR179C	PAU3	P25610	124 aa		-1.57	□□□□□ -2.66
CSN9	YDR179C	PAU2	P32612	120 aa		-1.57	□□□□□ -2.66
CSN9	YDR179C	GTT1	P40582	234 aa		-1.57	□□□□□ -2.66
CSN9	YDR179C	RPL38	P49167	78 aa	Known RBP	-1.57	□□□□□ -2.66
CSN9	YDR179C	TY1B-BL	Q12490	1755 aa		-1.57	□□□□□ -2.66
CSN9	YDR179C	CAT8	P39113	1433 aa		-1.57	□□□□□ -2.66
CSN9	YDR179C	RPS20	P38701	121 aa	Known RBP	-1.58	□□□□□ -2.66
CSN9	YDR179C	ICY1	Q04329	127 aa		-1.59	□□□□□ -2.66
CSN9	YDR179C	PDX3	P38075	228 aa	Known RBP	-1.6	□□□□□ -2.67
CSN9	YDR179C	RSM18	P40033	138 aa		-1.6	□□□□□ -2.67
CSN9	YDR179C	YDR246W-A	Q3E763	66 aa		-1.6	□□□□□ -2.67
CSN9	YDR179C	SSN2	P38931	1420 aa		-1.6	□□□□□ -2.67
CSN9	YDR179C	YGL204C	P53089	101 aa		-1.62	□□□□□ -2.67
CSN9	YDR179C	SEN1	Q00416	2231 aa	Known RBP	-1.62	□□□□□ -2.67
CSN9	YDR179C	YDR278C	Q05612	105 aa		-1.63	□□□□□ -2.67
CSN9	YDR179C	YIR021W-A	Q3E739	70 aa		-1.63	□□□□□ -2.67
CSN9	YDR179C	SRB6	P32570	121 aa		-1.64	□□□□□ -2.67
CSN9	YDR179C	PAU15	P40585	124 aa		-1.64	□□□□□ -2.67
CSN9	YDR179C	SMD2	Q06217	110 aa	Known RBP	-1.64	□□□□□ -2.67
CSN9	YDR179C	YCR099C	P25657	155 aa		-1.65	□□□□□ -2.67
CSN9	YDR179C	MRP17	P28778	131 aa		-1.65	□□□□□ -2.67
CSN9	YDR179C	YGR025W	P53216	100 aa		-1.65	□□□□□ -2.67
CSN9	YDR179C	PAU20	Q08322	120 aa		-1.65	□□□□□ -2.67
CSN9	YDR179C	RPS29A	P41057	56 aa	Known RBP	-1.66	□□□□□ -2.68
CSN9	YDR179C	SRB8	P25648	1427 aa		-1.66	□□□□□ -2.68
CSN9	YDR179C	NKP2	Q06162	153 aa		-1.67	□□□□□ -2.68
CSN9	YDR179C	MYO2	P19524	1574 aa	Known RBP	-1.68	□□□□□ -2.68
CSN9	YDR179C	YLR365W	Q7LIF2	110 aa		-1.68	□□□□□ -2.68
CSN9	YDR179C	PAU16	P35994	123 aa		-1.69	□□□□□ -2.68
CSN9	YDR179C	YLR118C	Q12354	227 aa		-1.69	□□□□□ -2.68
CSN9	YDR179C	YLR419W	Q06698	1435 aa	Known RBP	-1.69	□□□□□ -2.68
CSN9	YDR179C	RPB11	P38902	120 aa		-1.7	□□□□□ -2.68
CSN9	YDR179C	BUD4	P47136	1447 aa		-1.7	□□□□□ -2.68
CSN9	YDR179C	SNA2	P56508	79 aa		-1.7	□□□□□ -2.68
CSN9	YDR179C	PMD1	P32634	1753 aa		-1.7	□□□□□ -2.68
CSN9	YDR179C	TIM8	P57744	87 aa		-1.71	□□□□□ -2.68
CSN9	YDR179C	MIX14	Q04341	121 aa		-1.71	□□□□□ -2.68
CSN9	YDR179C	COX7	P10174	60 aa		-1.72	□□□□□ -2.68
CSN9	YDR179C	VMA21	P41806	77 aa		-1.72	□□□□□ -2.68
CSN9	YDR179C	YLR361C-A	Q3E795	98 aa		-1.72	□□□□□ -2.68
CSN9	YDR179C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	-1.73	□□□□□ -2.69
CSN9	YDR179C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	-1.73	□□□□□ -2.69
CSN9	YDR179C	YCR095W-A	Q3E787	52 aa		-1.74	□□□□□ -2.69
CSN9	YDR179C	MRP49	P32388	137 aa		-1.75	□□□□□ -2.69
CSN9	YDR179C	HUR1	P45820	110 aa		-1.75	□□□□□ -2.69
CSN9	YDR179C	YNR034W-A	Q3E841	98 aa		-1.75	□□□□□ -2.69
CSN9	YDR179C	AIM19	P40502	157 aa		-1.77	□□□□□ -2.69
CSN9	YDR179C	ECM12	O13529	151 aa		-1.78	□□□□□ -2.69
CSN9	YDR179C	PAU6	P0CE90	120 aa		-1.78	□□□□□ -2.69
CSN9	YDR179C	PAU18	P0CE91	120 aa		-1.78	□□□□□ -2.69
CSN9	YDR179C	YAR029W	P39549	74 aa		-1.78	□□□□□ -2.69
CSN9	YDR179C	SWC7	Q06707	132 aa		-1.78	□□□□□ -2.69
CSN9	YDR179C	PAU1	P0CE88	120 aa		-1.79	□□□□□ -2.7
CSN9	YDR179C	PAU14	P0CE89	120 aa		-1.79	□□□□□ -2.7
CSN9	YDR179C	PAU8	P0CE92	120 aa		-1.79	□□□□□ -2.7
CSN9	YDR179C	PAU11	P0CE93	120 aa		-1.79	□□□□□ -2.7
CSN9	YDR179C	PAU13	P38725	120 aa		-1.79	□□□□□ -2.7
CSN9	YDR179C	PAU10	Q03050	120 aa		-1.79	□□□□□ -2.7
CSN9	YDR179C	PAU9	Q3E770	120 aa		-1.79	□□□□□ -2.7
CSN9	YDR179C	BUD23	P25627	275 aa	Predicted RBP	-1.8	□□□□□ -2.7
CSN9	YDR179C	RTR2	Q12378	196 aa		-1.81	□□□□□ -2.7
CSN9	YDR179C	Q0032	Q9ZZX7	96 aa		-1.81	□□□□□ -2.7
CSN9	YDR179C	NTE1	Q04958	1679 aa		-1.83	□□□□□ -2.7
CSN9	YDR179C	APS2	Q00381	147 aa		-1.83	□□□□□ -2.7
CSN9	YDR179C	YNL042W-B	Q3E7Z2	85 aa		-1.83	□□□□□ -2.7
CSN9	YDR179C	RGI1	P40043	161 aa	Predicted RBP	-1.84	□□□□□ -2.7
CSN9	YDR179C	YLR099W-A	Q3E798	87 aa		-1.84	□□□□□ -2.7
CSN9	YDR179C	MIC10	Q96VH5	97 aa		-1.84	□□□□□ -2.7
CSN9	YDR179C	YBL071C	P38185	102 aa		-1.85	□□□□□ -2.71
CSN9	YDR179C	VMA7	P39111	118 aa		-1.85	□□□□□ -2.71
CSN9	YDR179C	DYN2	Q02647	92 aa		-1.85	□□□□□ -2.71
CSN9	YDR179C	PAU4	P53427	120 aa		-1.86	□□□□□ -2.71
CSN9	YDR179C	YMR001C-A	Q8TGS9	76 aa		-1.86	□□□□□ -2.71
CSN9	YDR179C	TLG1	Q03322	224 aa		-1.87	□□□□□ -2.71
CSN9	YDR179C	YLR042C	Q07990	161 aa		-1.87	□□□□□ -2.71
CSN9	YDR179C	TOM6	P33448	61 aa		-1.88	□□□□□ -2.71
CSN9	YDR179C	YRF1-1	P0CX20	1796 aa		-1.88	□□□□□ -2.71
CSN9	YDR179C	YRF1-5	P0CX21	1796 aa		-1.88	□□□□□ -2.71
CSN9	YDR179C	YRF1-8	P0CX22	1796 aa		-1.88	□□□□□ -2.71
CSN9	YDR179C	ROX3	P25046	220 aa		-1.89	□□□□□ -2.71
CSN9	YDR179C	HKR1	P41809	1802 aa		-1.89	□□□□□ -2.71
CSN9	YDR179C	YBL044W	P38194	122 aa		-1.9	□□□□□ -2.71
CSN9	YDR179C	SPC2	Q04969	178 aa		-1.9	□□□□□ -2.71
CSN9	YDR179C	TOR1	P35169	2470 aa		-1.9	□□□□□ -2.71
CSN9	YDR179C	PAU5	P43575	122 aa		-1.91	□□□□□ -2.72
CSN9	YDR179C	YBR201C-A	Q2V2Q3	67 aa		-1.91	□□□□□ -2.72
CSN9	YDR179C	SDH6	Q3E785	79 aa		-1.91	□□□□□ -2.72
CSN9	YDR179C	KRE5	P22023	1365 aa		-1.94	□□□□□ -2.72
CSN9	YDR179C	YOS1	Q3E834	85 aa		-1.94	□□□□□ -2.72
CSN9	YDR179C	MMS1	Q06211	1407 aa		-1.94	□□□□□ -2.72
CSN9	YDR179C	BPT1	P14772	1559 aa		-1.94	□□□□□ -2.72
CSN9	YDR179C	EDC1	P53080	175 aa	Predicted RBP	-1.95	□□□□□ -2.72
CSN9	YDR179C	YHR214C-D	P0CX93	97 aa		-2	□□□□□ -2.73
CSN9	YDR179C	SPC1	P46965	94 aa		-2	□□□□□ -2.73
CSN9	YDR179C	LYS2	P07702	1392 aa		-2	□□□□□ -2.73
CSN9	YDR179C	BPH1	P25356	2167 aa		-2	□□□□□ -2.73
CSN9	YDR179C	YBR090C	P38253	122 aa		-2.01	□□□□□ -2.73
CSN9	YDR179C	TY1B-BR	Q12193	1756 aa		-2.01	□□□□□ -2.73
CSN9	YDR179C	DNF3	Q12674	1656 aa		-2.02	□□□□□ -2.73

Retrieved 100 of 5,963 RNA–protein pairs in 111.9 ms