RNA–Protein interactions for RNA: YDR078C

SHU2, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU2, Length 672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU2YDR078C UBC5P15732 148 aa1.21□□□□□ -2.22
SHU2YDR078C AUA1P32450 94 aa1.21□□□□□ -2.22
SHU2YDR078C URA2P07259 2214 aaKnown RBP1.2□□□□□ -2.22
SHU2YDR078C YLR255CO13574 117 aa1.2□□□□□ -2.22
SHU2YDR078C KRE5P22023 1365 aa1.2□□□□□ -2.22
SHU2YDR078C CCW14O13547 238 aa1.19□□□□□ -2.22
SHU2YDR078C FYV7Q12247 151 aa1.18□□□□□ -2.22
SHU2YDR078C PRP8P33334 2413 aaKnown RBP1.17□□□□□ -2.22
SHU2YDR078C SEC16P48415 2195 aaKnown RBP1.17□□□□□ -2.22
SHU2YDR078C YPL038W-AQ3E7B4 63 aa1.17□□□□□ -2.22
SHU2YDR078C YHR173CP38864 112 aa1.16□□□□□ -2.22
SHU2YDR078C GCV3P39726 170 aaPredicted RBP1.16□□□□□ -2.22
SHU2YDR078C YIL086CP40503 102 aa1.16□□□□□ -2.22
SHU2YDR078C YDR210WQ03482 75 aa1.16□□□□□ -2.22
SHU2YDR078C SHU1P38751 150 aa1.15□□□□□ -2.23
SHU2YDR078C TY3B-IQ7LHG5 1498 aaKnown RBP1.15□□□□□ -2.23
SHU2YDR078C PDR11P40550 1411 aa1.15□□□□□ -2.23
SHU2YDR078C YCR095W-AQ3E787 52 aa1.14□□□□□ -2.23
SHU2YDR078C PAU5P43575 122 aa1.13□□□□□ -2.23
SHU2YDR078C MIX14Q04341 121 aa1.13□□□□□ -2.23
SHU2YDR078C YDR010CQ12426 110 aa1.13□□□□□ -2.23
SHU2YDR078C YBR072C-AQ3E794 53 aa1.13□□□□□ -2.23
SHU2YDR078C TOP2P06786 1428 aaKnown RBP1.13□□□□□ -2.23
SHU2YDR078C GEA1P47102 1408 aaPredicted RBP1.13□□□□□ -2.23
SHU2YDR078C MON2P48563 1636 aaPredicted RBP1.12□□□□□ -2.23
SHU2YDR078C RSM19P53733 91 aaPredicted RBP1.12□□□□□ -2.23
SHU2YDR078C COX12Q01519 83 aa1.11□□□□□ -2.23
SHU2YDR078C BUD4P47136 1447 aa1.1□□□□□ -2.23
SHU2YDR078C SNA2P56508 79 aa1.1□□□□□ -2.23
SHU2YDR078C COX19Q3E731 98 aa1.1□□□□□ -2.23
SHU2YDR078C KSH1Q8TGJ3 72 aa1.1□□□□□ -2.23
SHU2YDR078C URB1P34241 1764 aaKnown RBP1.1□□□□□ -2.23
SHU2YDR078C ROX3P25046 220 aa1.09□□□□□ -2.23
SHU2YDR078C MPC2P38857 129 aa1.09□□□□□ -2.23
SHU2YDR078C MRX7P53869 86 aa1.08□□□□□ -2.24
SHU2YDR078C SRB8P25648 1427 aa1.07□□□□□ -2.24
SHU2YDR078C GEA2P39993 1459 aaKnown RBP1.07□□□□□ -2.24
SHU2YDR078C SEC7P11075 2009 aaKnown RBP1.07□□□□□ -2.24
SHU2YDR078C PAU6P0CE90 120 aa1.07□□□□□ -2.24
SHU2YDR078C PAU18P0CE91 120 aa1.07□□□□□ -2.24
SHU2YDR078C YRF1-6P53819 1859 aa1.07□□□□□ -2.24
SHU2YDR078C YOR289WQ12012 251 aaPredicted RBP1.06□□□□□ -2.24
SHU2YDR078C REV3P14284 1504 aa1.05□□□□□ -2.24
SHU2YDR078C YOL164W-AQ3E7A5 60 aa1.05□□□□□ -2.24
SHU2YDR078C MRP17P28778 131 aa1.04□□□□□ -2.24
SHU2YDR078C YHL005CP38752 130 aa1.04□□□□□ -2.24
SHU2YDR078C HMRA1P0CY11 126 aa1.03□□□□□ -2.24
SHU2YDR078C YBL071CP38185 102 aa1.03□□□□□ -2.24
SHU2YDR078C ICY1Q04329 127 aa1.03□□□□□ -2.24
SHU2YDR078C ZEO1Q08245 113 aa1.03□□□□□ -2.24
SHU2YDR078C CAT8P39113 1433 aa1.03□□□□□ -2.24
SHU2YDR078C MRPL38P35996 138 aaPredicted RBP1.02□□□□□ -2.25
SHU2YDR078C YPL225WQ08971 146 aaKnown RBP1.02□□□□□ -2.25
SHU2YDR078C YNR034W-AQ3E841 98 aa1.02□□□□□ -2.25
SHU2YDR078C SNF2P22082 1703 aa1.01□□□□□ -2.25
SHU2YDR078C BPT1P14772 1559 aa1.01□□□□□ -2.25
SHU2YDR078C SSN2P38931 1420 aa1.01□□□□□ -2.25
SHU2YDR078C EMC5P40540 141 aa1.01□□□□□ -2.25
SHU2YDR078C PAU20Q08322 120 aa1.01□□□□□ -2.25
SHU2YDR078C RSF2P46974 1380 aa1□□□□□ -2.25
SHU2YDR078C RPS11AP0CX47 156 aaKnown RBP1□□□□□ -2.25
SHU2YDR078C RPS11BP0CX48 156 aaKnown RBP1□□□□□ -2.25
SHU2YDR078C RRT15Q3E811 62 aa1□□□□□ -2.25
SHU2YDR078C TY4B-HP0C2J7 1802 aa1□□□□□ -2.25
SHU2YDR078C RPA12P32529 125 aaKnown RBP0.99□□□□□ -2.25
SHU2YDR078C YBR292CP38357 123 aa0.99□□□□□ -2.25
SHU2YDR078C RPS29BP41058 56 aaKnown RBP0.99□□□□□ -2.25
SHU2YDR078C BRR2P32639 2163 aaKnown RBP0.98□□□□□ -2.25
SHU2YDR078C KOG1P38873 1557 aa0.97□□□□□ -2.25
SHU2YDR078C PAU1P0CE88 120 aa0.97□□□□□ -2.25
SHU2YDR078C PAU14P0CE89 120 aa0.97□□□□□ -2.25
SHU2YDR078C PAU8P0CE92 120 aa0.97□□□□□ -2.25
SHU2YDR078C PAU11P0CE93 120 aa0.97□□□□□ -2.25
SHU2YDR078C PAU13P38725 120 aa0.97□□□□□ -2.25
SHU2YDR078C AIM19P40502 157 aa0.97□□□□□ -2.25
SHU2YDR078C MSL1P40567 111 aaPredicted RBP0.97□□□□□ -2.25
SHU2YDR078C SPC1P46965 94 aa0.97□□□□□ -2.25
SHU2YDR078C PAU10Q03050 120 aa0.97□□□□□ -2.25
SHU2YDR078C NHP10Q03435 203 aa0.97□□□□□ -2.25
SHU2YDR078C PAU9Q3E770 120 aa0.97□□□□□ -2.25
SHU2YDR078C SWR1Q05471 1514 aa0.97□□□□□ -2.25
SHU2YDR078C BNI1P41832 1953 aa0.95□□□□□ -2.26
SHU2YDR078C RSM18P40033 138 aa0.94□□□□□ -2.26
SHU2YDR078C POL2P21951 2222 aaKnown RBP0.94□□□□□ -2.26
SHU2YDR078C BLM10P43583 2143 aa0.93□□□□□ -2.26
SHU2YDR078C PAU4P53427 120 aa0.93□□□□□ -2.26
SHU2YDR078C NTE1Q04958 1679 aa0.93□□□□□ -2.26
SHU2YDR078C SNU13P39990 126 aaKnown RBP0.9□□□□□ -2.27
SHU2YDR078C YDR029WQ12111 104 aa0.9□□□□□ -2.27
SHU2YDR078C SUS1Q6WNK7 96 aa0.9□□□□□ -2.27
SHU2YDR078C YNL190WP53872 204 aa0.89□□□□□ -2.27
SHU2YDR078C RPC10P40422 70 aa0.88□□□□□ -2.27
SHU2YDR078C YDR042CQ03205 200 aa0.87□□□□□ -2.27
SHU2YDR078C IRC20Q06554 1556 aa0.87□□□□□ -2.27
SHU2YDR078C TY1B-DR4Q07793 1604 aa0.86□□□□□ -2.27
SHU2YDR078C YNL198CP40166 100 aa0.85□□□□□ -2.27
SHU2YDR078C MHF2Q3E829 80 aa0.85□□□□□ -2.27
SHU2YDR078C YRF1-1P0CX20 1796 aa0.84□□□□□ -2.27
SHU2YDR078C YRF1-5P0CX21 1796 aa0.84□□□□□ -2.27
SHU2YDR078C YRF1-8P0CX22 1796 aa0.84□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms