RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W YRF1-3P0CX14 1859 aa1.07□□□□□ -2.24
SHR3YDL212W YRF1-7P0CX15 1859 aa1.07□□□□□ -2.24
SHR3YDL212W YRF1-6P53819 1859 aa1.07□□□□□ -2.24
SHR3YDL212W RSF2P46974 1380 aa1.07□□□□□ -2.24
SHR3YDL212W DNA2P38859 1522 aa1.06□□□□□ -2.24
SHR3YDL212W CCW14O13547 238 aa1.06□□□□□ -2.24
SHR3YDL212W RPS22AP0C0W1 130 aaKnown RBP1.06□□□□□ -2.24
SHR3YDL212W SRB6P32570 121 aa1.06□□□□□ -2.24
SHR3YDL212W SNU13P39990 126 aaKnown RBP1.06□□□□□ -2.24
SHR3YDL212W YDR029WQ12111 104 aa1.06□□□□□ -2.24
SHR3YDL212W YGL194C-AQ2V2P6 80 aa1.06□□□□□ -2.24
SHR3YDL212W RPS22BQ3E7Y3 130 aaKnown RBP1.06□□□□□ -2.24
SHR3YDL212W RRT15Q3E811 62 aa1.06□□□□□ -2.24
SHR3YDL212W ENV10Q99382 181 aa1.06□□□□□ -2.24
SHR3YDL212W PDR10P51533 1564 aa1.05□□□□□ -2.24
SHR3YDL212W MRPL31P14063 131 aaPredicted RBP1.05□□□□□ -2.24
SHR3YDL212W PAU5P43575 122 aa1.05□□□□□ -2.24
SHR3YDL212W MRPS12P53732 153 aa1.05□□□□□ -2.24
SHR3YDL212W YDR042CQ03205 200 aa1.05□□□□□ -2.24
SHR3YDL212W NHP10Q03435 203 aa1.05□□□□□ -2.24
SHR3YDL212W YOL118CQ08259 102 aa1.05□□□□□ -2.24
SHR3YDL212W SCP1Q08873 200 aa1.05□□□□□ -2.24
SHR3YDL212W YGR240C-AQ3E786 66 aa1.05□□□□□ -2.24
SHR3YDL212W LTE1P07866 1435 aa1.05□□□□□ -2.24
SHR3YDL212W YPK9Q12697 1472 aa1.05□□□□□ -2.24
SHR3YDL212W BPT1P14772 1559 aa1.04□□□□□ -2.24
SHR3YDL212W ROX3P25046 220 aa1.04□□□□□ -2.24
SHR3YDL212W TY4B-JP47024 1803 aa1.03□□□□□ -2.24
SHR3YDL212W HFA1P32874 2273 aa1.03□□□□□ -2.24
SHR3YDL212W ECM12O13529 151 aa1.03□□□□□ -2.24
SHR3YDL212W GCV3P39726 170 aaPredicted RBP1.03□□□□□ -2.24
SHR3YDL212W YDR210WQ03482 75 aa1.03□□□□□ -2.24
SHR3YDL212W YCR095W-AQ3E787 52 aa1.03□□□□□ -2.24
SHR3YDL212W SUS1Q6WNK7 96 aa1.03□□□□□ -2.24
SHR3YDL212W YPR117WQ06116 2489 aa1.03□□□□□ -2.25
SHR3YDL212W RSM18P40033 138 aa1.02□□□□□ -2.25
SHR3YDL212W IMP2P46972 177 aa1.02□□□□□ -2.25
SHR3YDL212W YSP2Q06681 1438 aa1.02□□□□□ -2.25
SHR3YDL212W MRPL38P35996 138 aaPredicted RBP1.01□□□□□ -2.25
SHR3YDL212W HHY1P39982 102 aa1.01□□□□□ -2.25
SHR3YDL212W ICY1Q04329 127 aa1.01□□□□□ -2.25
SHR3YDL212W HUG1Q6Q5K6 68 aa1.01□□□□□ -2.25
SHR3YDL212W MVB12P42939 101 aa1□□□□□ -2.25
SHR3YDL212W LCL1Q02786 101 aa1□□□□□ -2.25
SHR3YDL212W YMR175W-AQ3E766 64 aa1□□□□□ -2.25
SHR3YDL212W YPL038W-AQ3E7B4 63 aa1□□□□□ -2.25
SHR3YDL212W YKL068W-AQ3E826 78 aa1□□□□□ -2.25
SHR3YDL212W SRB8P25648 1427 aa0.99□□□□□ -2.25
SHR3YDL212W YLR255CO13574 117 aa0.99□□□□□ -2.25
SHR3YDL212W SNA2P56508 79 aa0.99□□□□□ -2.25
SHR3YDL212W COX12Q01519 83 aa0.99□□□□□ -2.25
SHR3YDL212W RPA190P10964 1664 aaKnown RBP0.99□□□□□ -2.25
SHR3YDL212W PAU6P0CE90 120 aa0.98□□□□□ -2.25
SHR3YDL212W PAU18P0CE91 120 aa0.98□□□□□ -2.25
SHR3YDL212W YHR213W-BQ8TGK1 99 aa0.98□□□□□ -2.25
SHR3YDL212W GDB1Q06625 1536 aa0.98□□□□□ -2.25
SHR3YDL212W MRP17P28778 131 aa0.97□□□□□ -2.25
SHR3YDL212W YBL071CP38185 102 aa0.97□□□□□ -2.25
SHR3YDL212W YJR128WP47162 119 aa0.97□□□□□ -2.25
SHR3YDL212W COX19Q3E731 98 aa0.97□□□□□ -2.25
SHR3YDL212W MYO1P08964 1928 aa0.97□□□□□ -2.25
SHR3YDL212W ESC1Q03661 1658 aaKnown RBP0.97□□□□□ -2.25
SHR3YDL212W LAA1P39526 2014 aa0.96□□□□□ -2.26
SHR3YDL212W YCR085WP25650 117 aa0.96□□□□□ -2.26
SHR3YDL212W AIM19P40502 157 aa0.96□□□□□ -2.26
SHR3YDL212W YIL086CP40503 102 aa0.96□□□□□ -2.26
SHR3YDL212W SPC1P46965 94 aa0.96□□□□□ -2.26
SHR3YDL212W MRX7P53869 86 aa0.96□□□□□ -2.26
SHR3YDL212W YNR034W-AQ3E841 98 aa0.96□□□□□ -2.26
SHR3YDL212W SWR1Q05471 1514 aa0.95□□□□□ -2.26
SHR3YDL212W POL1P13382 1468 aa0.95□□□□□ -2.26
SHR3YDL212W RPS11AP0CX47 156 aaKnown RBP0.95□□□□□ -2.26
SHR3YDL212W RPS11BP0CX48 156 aaKnown RBP0.95□□□□□ -2.26
SHR3YDL212W RPA12P32529 125 aaKnown RBP0.95□□□□□ -2.26
SHR3YDL212W YMR141CP40211 102 aa0.95□□□□□ -2.26
SHR3YDL212W BRR2P32639 2163 aaKnown RBP0.95□□□□□ -2.26
SHR3YDL212W SEC7P11075 2009 aaKnown RBP0.94□□□□□ -2.26
SHR3YDL212W NHP2P32495 156 aaPredicted RBP0.94□□□□□ -2.26
SHR3YDL212W SHU1P38751 150 aa0.94□□□□□ -2.26
SHR3YDL212W MPC2P38857 129 aa0.94□□□□□ -2.26
SHR3YDL212W CWP2P43497 92 aa0.94□□□□□ -2.26
SHR3YDL212W MHF2Q3E829 80 aa0.94□□□□□ -2.26
SHR3YDL212W SEC16P48415 2195 aaKnown RBP0.94□□□□□ -2.26
SHR3YDL212W YBR292CP38357 123 aa0.93□□□□□ -2.26
SHR3YDL212W POC4Q12245 148 aaPredicted RBP0.93□□□□□ -2.26
SHR3YDL212W YOR034C-AQ3E735 80 aa0.93□□□□□ -2.26
SHR3YDL212W NTE1Q04958 1679 aa0.92□□□□□ -2.26
SHR3YDL212W PAU1P0CE88 120 aa0.92□□□□□ -2.26
SHR3YDL212W PAU14P0CE89 120 aa0.92□□□□□ -2.26
SHR3YDL212W PAU8P0CE92 120 aa0.92□□□□□ -2.26
SHR3YDL212W PAU11P0CE93 120 aa0.92□□□□□ -2.26
SHR3YDL212W PAU13P38725 120 aa0.92□□□□□ -2.26
SHR3YDL212W PAU4P53427 120 aa0.92□□□□□ -2.26
SHR3YDL212W PAU10Q03050 120 aa0.92□□□□□ -2.26
SHR3YDL212W PAU20Q08322 120 aa0.92□□□□□ -2.26
SHR3YDL212W YOR343CQ12484 108 aa0.92□□□□□ -2.26
SHR3YDL212W PAU9Q3E770 120 aa0.92□□□□□ -2.26
SHR3YDL212W TOM6P33448 61 aa0.91□□□□□ -2.26
SHR3YDL212W BSC4P53841 131 aa0.91□□□□□ -2.26
SHR3YDL212W URB1P34241 1764 aaKnown RBP0.9□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 28 ms