RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W BRP1P53194 125 aa4.12□□□□□ -1.75
SHM1YBR263W ARC18Q05933 178 aaKnown RBP4.12□□□□□ -1.75
SHM1YBR263W YPR170W-BP0C5R9 85 aa4.11□□□□□ -1.75
SHM1YBR263W YER039C-AP0CD97 72 aa4.11□□□□□ -1.75
SHM1YBR263W RPL16BP26785 198 aaKnown RBP4.11□□□□□ -1.75
SHM1YBR263W RRT13P40042 185 aa4.11□□□□□ -1.75
SHM1YBR263W VAM10Q08474 114 aa4.11□□□□□ -1.75
SHM1YBR263W ISD11Q6Q560 94 aa4.11□□□□□ -1.75
SHM1YBR263W YHR130CP38834 111 aa4.11□□□□□ -1.75
SHM1YBR263W HAC1P41546 238 aa4.11□□□□□ -1.75
SHM1YBR263W THG1P53215 237 aaKnown RBP4.11□□□□□ -1.75
SHM1YBR263W YHR140WP38842 239 aa4.1□□□□□ -1.75
SHM1YBR263W PAU7P39545 55 aa4.1□□□□□ -1.75
SHM1YBR263W YPS5P53057 165 aa4.1□□□□□ -1.75
SHM1YBR263W MMS2P53152 137 aa4.1□□□□□ -1.75
SHM1YBR263W PAU19P0CE85 124 aa4.09□□□□□ -1.75
SHM1YBR263W PAU21P0CE86 164 aa4.09□□□□□ -1.75
SHM1YBR263W PAU22P0CE87 164 aa4.09□□□□□ -1.75
SHM1YBR263W PAU3P25610 124 aa4.09□□□□□ -1.75
SHM1YBR263W ZRT1P32804 376 aa4.09□□□□□ -1.75
SHM1YBR263W KTI12P34253 313 aaKnown RBP4.09□□□□□ -1.75
SHM1YBR263W IRC22P40006 225 aa4.09□□□□□ -1.75
SHM1YBR263W YGR149WP48236 432 aa4.09□□□□□ -1.75
SHM1YBR263W SDS23P53172 527 aa4.09□□□□□ -1.75
SHM1YBR263W HAL1Q01766 294 aa4.09□□□□□ -1.75
SHM1YBR263W SGF11Q03067 99 aa4.09□□□□□ -1.75
SHM1YBR263W GPI19Q04082 140 aa4.09□□□□□ -1.75
SHM1YBR263W RPL28P02406 149 aaKnown RBP4.08□□□□□ -1.76
SHM1YBR263W MRPL28P36527 147 aa4.08□□□□□ -1.76
SHM1YBR263W POR1P04840 283 aaKnown RBP4.07□□□□□ -1.76
SHM1YBR263W RPL23AP0CX41 137 aaKnown RBP4.07□□□□□ -1.76
SHM1YBR263W RPL23BP0CX42 137 aaKnown RBP4.07□□□□□ -1.76
SHM1YBR263W RPL18AP0CX49 186 aaKnown RBP4.07□□□□□ -1.76
SHM1YBR263W RPL18BP0CX50 186 aaKnown RBP4.07□□□□□ -1.76
SHM1YBR263W ANB1P19211 157 aa4.07□□□□□ -1.76
SHM1YBR263W AIM11P87275 137 aa4.07□□□□□ -1.76
SHM1YBR263W YLR042CQ07990 161 aa4.07□□□□□ -1.76
SHM1YBR263W YCR024C-BQ3E7Z8 88 aa4.07□□□□□ -1.76
SHM1YBR263W HYP2P23301 157 aaKnown RBP4.06□□□□□ -1.76
SHM1YBR263W YKR032WP36127 104 aa4.06□□□□□ -1.76
SHM1YBR263W KRE9P39005 276 aa4.06□□□□□ -1.76
SHM1YBR263W YNL217WP40152 326 aa4.06□□□□□ -1.76
SHM1YBR263W YIL134C-AQ45U18 67 aa4.06□□□□□ -1.76
SHM1YBR263W PAI3P01094 68 aa4.05□□□□□ -1.76
SHM1YBR263W SEC4P07560 215 aaKnown RBP4.05□□□□□ -1.76
SHM1YBR263W UBC5P15732 148 aa4.05□□□□□ -1.76
SHM1YBR263W YGL230CP53074 147 aa4.05□□□□□ -1.76
SHM1YBR263W CYT2Q00873 224 aa4.05□□□□□ -1.76
SHM1YBR263W YMR320WQ04897 101 aa4.05□□□□□ -1.76
SHM1YBR263W YGR240C-AQ3E786 66 aa4.05□□□□□ -1.76
SHM1YBR263W RPS22BQ3E7Y3 130 aaKnown RBP4.05□□□□□ -1.76
SHM1YBR263W PBI2P0CT04 75 aaKnown RBP4.05□□□□□ -1.76
SHM1YBR263W HOT13P36078 116 aa4.05□□□□□ -1.76
SHM1YBR263W YKR041WP36134 250 aa4.05□□□□□ -1.76
SHM1YBR263W PET8P38921 284 aa4.05□□□□□ -1.76
SHM1YBR263W ATP23P53722 227 aa4.05□□□□□ -1.76
SHM1YBR263W KTI11Q3E840 82 aa4.05□□□□□ -1.76
SHM1YBR263W SBH1P52870 82 aa4.04□□□□□ -1.76
SHM1YBR263W PAU23Q07987 124 aa4.04□□□□□ -1.76
SHM1YBR263W DGA1Q08650 418 aa4.04□□□□□ -1.76
SHM1YBR263W PAU17Q12370 124 aa4.04□□□□□ -1.76
SHM1YBR263W RPL42AP0CX27 106 aaKnown RBP4.03□□□□□ -1.76
SHM1YBR263W RPL42BP0CX28 106 aaKnown RBP4.03□□□□□ -1.76
SHM1YBR263W TOA2P32774 122 aa4.03□□□□□ -1.76
SHM1YBR263W COF1Q03048 143 aaKnown RBP4.03□□□□□ -1.76
SHM1YBR263W MBF1O14467 151 aaKnown RBP4.02□□□□□ -1.77
SHM1YBR263W RAD6P06104 172 aa4.02□□□□□ -1.77
SHM1YBR263W COX10P21592 462 aa4.02□□□□□ -1.77
SHM1YBR263W YCR007CP25354 239 aa4.02□□□□□ -1.77
SHM1YBR263W TEM1P38987 245 aa4.02□□□□□ -1.77
SHM1YBR263W RPR2P40571 144 aa4.02□□□□□ -1.77
SHM1YBR263W OST3P48439 350 aa4.02□□□□□ -1.77
SHM1YBR263W CRC1Q12289 327 aa4.02□□□□□ -1.77
SHM1YBR263W YLR412C-AQ3E742 68 aa4.02□□□□□ -1.77
SHM1YBR263W MRPL11P36521 249 aaPredicted RBP4.01□□□□□ -1.77
SHM1YBR263W OST2P46964 130 aa4.01□□□□□ -1.77
SHM1YBR263W YIL014C-AQ02598 104 aa4.01□□□□□ -1.77
SHM1YBR263W INO4P13902 151 aa4□□□□□ -1.77
SHM1YBR263W YNL200CP40165 246 aaKnown RBP4□□□□□ -1.77
SHM1YBR263W YIL059CP40520 121 aa4□□□□□ -1.77
SHM1YBR263W DCV1P43595 202 aa4□□□□□ -1.77
SHM1YBR263W MGR2Q02889 113 aa4□□□□□ -1.77
SHM1YBR263W PMP3P87284 55 aa3.99□□□□□ -1.77
SHM1YBR263W NAT5Q08689 176 aa3.99□□□□□ -1.77
SHM1YBR263W PFY1P07274 126 aa3.98□□□□□ -1.77
SHM1YBR263W YKR070WP36151 352 aaKnown RBP3.98□□□□□ -1.77
SHM1YBR263W MSL1P40567 111 aaPredicted RBP3.98□□□□□ -1.77
SHM1YBR263W YGL118CP53132 145 aa3.98□□□□□ -1.77
SHM1YBR263W YNL277W-AQ3E7Z0 62 aa3.98□□□□□ -1.77
SHM1YBR263W AQY1P0CD91 305 aa3.98□□□□□ -1.77
SHM1YBR263W PEX22P39718 180 aa3.98□□□□□ -1.77
SHM1YBR263W YFL065CP43539 102 aa3.98□□□□□ -1.77
SHM1YBR263W SPC1P46965 94 aa3.98□□□□□ -1.77
SHM1YBR263W YGR039WP53225 103 aa3.98□□□□□ -1.77
SHM1YBR263W FCF1Q05498 189 aaPredicted RBP3.98□□□□□ -1.77
SHM1YBR263W YPR203WQ08994 102 aa3.98□□□□□ -1.77
SHM1YBR263W YLL066W-BQ8TGJ7 56 aa3.98□□□□□ -1.77
SHM1YBR263W IGO2Q9P305 131 aa3.98□□□□□ -1.77
SHM1YBR263W RPL16AP26784 199 aaKnown RBP3.97□□□□□ -1.77
SHM1YBR263W YER134CP40081 178 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms