RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C YGL230CP53074 147 aa1.22□□□□□ -2.21
SHG1YBR258C SYM1Q06563 197 aa1.22□□□□□ -2.21
SHG1YBR258C GPI11Q06636 219 aa1.22□□□□□ -2.21
SHG1YBR258C CMC2Q3E7A4 109 aa1.21□□□□□ -2.22
SHG1YBR258C AIM19P40502 157 aa1.2□□□□□ -2.22
SHG1YBR258C YGL204CP53089 101 aa1.2□□□□□ -2.22
SHG1YBR258C YNL019CP53975 284 aa1.2□□□□□ -2.22
SHG1YBR258C YML079WQ03629 201 aa1.2□□□□□ -2.22
SHG1YBR258C SPS2P08459 502 aa1.19□□□□□ -2.22
SHG1YBR258C INO4P13902 151 aa1.19□□□□□ -2.22
SHG1YBR258C HPM1P40481 377 aa1.19□□□□□ -2.22
SHG1YBR258C TMA20P89886 181 aaPredicted RBP1.19□□□□□ -2.22
SHG1YBR258C YDR029WQ12111 104 aa1.19□□□□□ -2.22
SHG1YBR258C YGR240C-AQ3E786 66 aa1.19□□□□□ -2.22
SHG1YBR258C RPL33AP05744 107 aaKnown RBP1.18□□□□□ -2.22
SHG1YBR258C YER188C-AP0C0V2 99 aa1.18□□□□□ -2.22
SHG1YBR258C PET54P10834 293 aa1.18□□□□□ -2.22
SHG1YBR258C SHB17P36136 271 aaKnown RBP1.18□□□□□ -2.22
SHG1YBR258C YKR070WP36151 352 aaKnown RBP1.18□□□□□ -2.22
SHG1YBR258C YHR138CP38841 114 aaPredicted RBP1.18□□□□□ -2.22
SHG1YBR258C YGR269WP40326 108 aa1.18□□□□□ -2.22
SHG1YBR258C DCV1P43595 202 aa1.18□□□□□ -2.22
SHG1YBR258C LIP1Q03579 150 aa1.18□□□□□ -2.22
SHG1YBR258C RAV2Q03956 351 aa1.18□□□□□ -2.22
SHG1YBR258C RDI1Q12434 202 aa1.18□□□□□ -2.22
SHG1YBR258C KTI11Q3E840 82 aa1.18□□□□□ -2.22
SHG1YBR258C GLC8P41818 229 aa1.17□□□□□ -2.22
SHG1YBR258C DIE2P50076 525 aa1.17□□□□□ -2.22
SHG1YBR258C NMA1Q06178 401 aaKnown RBP1.17□□□□□ -2.22
SHG1YBR258C HRD1Q08109 551 aa1.17□□□□□ -2.22
SHG1YBR258C COX9P07255 59 aa1.16□□□□□ -2.22
SHG1YBR258C RPS25BP0C0T4 108 aaKnown RBP1.16□□□□□ -2.22
SHG1YBR258C YGL041W-AP0C5N3 154 aa1.16□□□□□ -2.22
SHG1YBR258C EMC5P40540 141 aa1.16□□□□□ -2.22
SHG1YBR258C RPS29BP41058 56 aaKnown RBP1.16□□□□□ -2.22
SHG1YBR258C AVO2Q04749 426 aa1.16□□□□□ -2.22
SHG1YBR258C YLR042CQ07990 161 aa1.16□□□□□ -2.22
SHG1YBR258C YDL157CQ12082 118 aa1.16□□□□□ -2.22
SHG1YBR258C CCW12Q12127 133 aa1.16□□□□□ -2.22
SHG1YBR258C RPS25AQ3E792 108 aaPredicted RBP1.16□□□□□ -2.22
SHG1YBR258C YPR108W-AQ3E7B3 70 aa1.16□□□□□ -2.22
SHG1YBR258C YLR365WQ7LIF2 110 aa1.16□□□□□ -2.22
SHG1YBR258C ATP5P09457 212 aa1.15□□□□□ -2.23
SHG1YBR258C UGX2P32772 223 aa1.15□□□□□ -2.23
SHG1YBR258C YBR013CP38215 129 aa1.15□□□□□ -2.23
SHG1YBR258C UBI4P0CG63 381 aaKnown RBP1.14□□□□□ -2.23
SHG1YBR258C UBC4P15731 148 aa1.14□□□□□ -2.23
SHG1YBR258C ORM1P53224 222 aa1.14□□□□□ -2.23
SHG1YBR258C YDL241WQ07738 123 aa1.14□□□□□ -2.23
SHG1YBR258C YGL258W-AQ3E740 77 aa1.14□□□□□ -2.23
SHG1YBR258C YHR213WP0CI67 198 aa1.13□□□□□ -2.23
SHG1YBR258C YBL071CP38185 102 aa1.13□□□□□ -2.23
SHG1YBR258C YGR042WP53227 271 aa1.13□□□□□ -2.23
SHG1YBR258C PAU12P53343 120 aa1.13□□□□□ -2.23
SHG1YBR258C SNA2P56508 79 aa1.13□□□□□ -2.23
SHG1YBR258C KEI1Q06346 221 aa1.13□□□□□ -2.23
SHG1YBR258C HUG1Q6Q5K6 68 aa1.13□□□□□ -2.23
SHG1YBR258C SPT14P32363 452 aa1.12□□□□□ -2.23
SHG1YBR258C PAU24P38155 120 aa1.12□□□□□ -2.23
SHG1YBR258C EST3Q03096 181 aa1.12□□□□□ -2.23
SHG1YBR258C TLG1Q03322 224 aa1.12□□□□□ -2.23
SHG1YBR258C YMR320WQ04897 101 aa1.12□□□□□ -2.23
SHG1YBR258C PRE1P22141 198 aaKnown RBP1.11□□□□□ -2.23
SHG1YBR258C YAR064WP39563 99 aa1.11□□□□□ -2.23
SHG1YBR258C YIL102CP40488 101 aa1.11□□□□□ -2.23
SHG1YBR258C PAM16P42949 149 aa1.11□□□□□ -2.23
SHG1YBR258C IMP2P46972 177 aa1.11□□□□□ -2.23
SHG1YBR258C MAK3Q03503 176 aa1.11□□□□□ -2.23
SHG1YBR258C RRT7Q07829 113 aa1.11□□□□□ -2.23
SHG1YBR258C YPR010C-AA5Z2X5 72 aa1.1□□□□□ -2.23
SHG1YBR258C QCR2P07257 368 aa1.1□□□□□ -2.23
SHG1YBR258C PAU2P32612 120 aa1.1□□□□□ -2.23
SHG1YBR258C SLM6P38343 150 aa1.1□□□□□ -2.23
SHG1YBR258C HTD2P38790 280 aaKnown RBP1.1□□□□□ -2.23
SHG1YBR258C DYN2Q02647 92 aa1.1□□□□□ -2.23
SHG1YBR258C SDH7Q04401 133 aa1.1□□□□□ -2.23
SHG1YBR258C FPR2P32472 135 aa1.09□□□□□ -2.23
SHG1YBR258C EMP24P32803 203 aaKnown RBP1.09□□□□□ -2.23
SHG1YBR258C AME1P38313 324 aa1.09□□□□□ -2.23
SHG1YBR258C CIN5P40917 295 aa1.09□□□□□ -2.23
SHG1YBR258C TMA23Q03525 211 aa1.09□□□□□ -2.23
SHG1YBR258C SPC2Q04969 178 aa1.09□□□□□ -2.23
SHG1YBR258C YLR194CQ05777 254 aa1.09□□□□□ -2.23
SHG1YBR258C YPR145C-AQ2V2P0 78 aa1.09□□□□□ -2.23
SHG1YBR258C RPL14AP36105 138 aaKnown RBP1.08□□□□□ -2.24
SHG1YBR258C RPL14BP38754 138 aaKnown RBP1.08□□□□□ -2.24
SHG1YBR258C YER181CP40097 107 aa1.08□□□□□ -2.24
SHG1YBR258C SRP21P32342 167 aa1.07□□□□□ -2.24
SHG1YBR258C ERI1P62651 68 aaKnown RBP1.07□□□□□ -2.24
SHG1YBR258C ATG8P38182 117 aaRIP-Chip data1.06□□□□□ -2.24not detected
SHG1YBR258C DER1P38307 211 aa1.06□□□□□ -2.24
SHG1YBR258C YEL014CP39999 101 aa1.06□□□□□ -2.24
SHG1YBR258C YDR366CP87287 132 aa1.06□□□□□ -2.24
SHG1YBR258C YLR099W-AQ3E798 87 aa1.06□□□□□ -2.24
SHG1YBR258C YOL013W-AP0C272 63 aaPredicted RBP1.05□□□□□ -2.24
SHG1YBR258C SFT2P38166 215 aa1.05□□□□□ -2.24
SHG1YBR258C YBR027CP38220 110 aa1.05□□□□□ -2.24
SHG1YBR258C YAL064WP39711 94 aa1.05□□□□□ -2.24
SHG1YBR258C BRP1P53194 125 aa1.05□□□□□ -2.24
SHG1YBR258C FRQ1Q06389 190 aa1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms