RNA–Protein interactions for RNA: RUF22

RUF22, Transcript of RNA of Unknown Function, yeastyeast

Gene RUF22, Length 515 nt, Biotype ncRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUF22RUF22 HUR1P45820 110 aa0.1□□□□□ -2.39
RUF22RUF22 YNL190WP53872 204 aa0.1□□□□□ -2.39
RUF22RUF22 TOP2P06786 1428 aaKnown RBP0.1□□□□□ -2.39
RUF22RUF22 YLR419WQ06698 1435 aaKnown RBP0.1□□□□□ -2.39
RUF22RUF22 YLR255CO13574 117 aa0.09□□□□□ -2.4
RUF22RUF22 RPA12P32529 125 aaKnown RBP0.09□□□□□ -2.4
RUF22RUF22 COX12Q01519 83 aa0.09□□□□□ -2.4
RUF22RUF22 RUB1Q03919 77 aa0.09□□□□□ -2.4
RUF22RUF22 YLR042CQ07990 161 aa0.09□□□□□ -2.4
RUF22RUF22 WIP1Q2V2P8 89 aa0.09□□□□□ -2.4
RUF22RUF22 YIR021W-AQ3E739 70 aa0.09□□□□□ -2.4
RUF22RUF22 RPO41P13433 1351 aaKnown RBP0.08□□□□□ -2.4
RUF22RUF22 YPL038W-AQ3E7B4 63 aa0.08□□□□□ -2.4
RUF22RUF22 POL2P21951 2222 aaKnown RBP0.07□□□□□ -2.4
RUF22RUF22 SPP41P38904 1435 aa0.07□□□□□ -2.4
RUF22RUF22 YCR101CP25607 182 aa0.07□□□□□ -2.4
RUF22RUF22 PAU15P40585 124 aa0.07□□□□□ -2.4
RUF22RUF22 YDR210WQ03482 75 aa0.07□□□□□ -2.4
RUF22RUF22 YRF1-2P40105 1681 aa0.06□□□□□ -2.4
RUF22RUF22 NTE1Q04958 1679 aa0.06□□□□□ -2.4
RUF22RUF22 RPS11AP0CX47 156 aaKnown RBP0.06□□□□□ -2.4
RUF22RUF22 RPS11BP0CX48 156 aaKnown RBP0.06□□□□□ -2.4
RUF22RUF22 MRP17P28778 131 aa0.06□□□□□ -2.4
RUF22RUF22 PAU16P35994 123 aa0.06□□□□□ -2.4
RUF22RUF22 TY1B-BLQ12490 1755 aa0.06□□□□□ -2.4
RUF22RUF22 YBR292CP38357 123 aa0.05□□□□□ -2.4
RUF22RUF22 MRX7P53869 86 aa0.05□□□□□ -2.4
RUF22RUF22 SRB8P25648 1427 aa0.04□□□□□ -2.4
RUF22RUF22 SSN2P38931 1420 aa0.04□□□□□ -2.4
RUF22RUF22 BPT1P14772 1559 aa0.04□□□□□ -2.4
RUF22RUF22 BUD23P25627 275 aaPredicted RBP0.04□□□□□ -2.4
RUF22RUF22 YNL198CP40166 100 aa0.04□□□□□ -2.4
RUF22RUF22 SNA2P56508 79 aa0.04□□□□□ -2.4
RUF22RUF22 YOS1Q3E834 85 aa0.04□□□□□ -2.4
RUF22RUF22 GNA1P43577 159 aaPredicted RBP0.03□□□□□ -2.4
RUF22RUF22 ICY1Q04329 127 aa0.03□□□□□ -2.4
RUF22RUF22 YCR095W-AQ3E787 52 aa0.03□□□□□ -2.4
RUF22RUF22 LYS2P07702 1392 aa0.03□□□□□ -2.4
RUF22RUF22 YOR304C-AO14468 76 aa0.02□□□□□ -2.41
RUF22RUF22 YER039C-AP0CD97 72 aa0.02□□□□□ -2.41
RUF22RUF22 MRPL38P35996 138 aaPredicted RBP0.02□□□□□ -2.41
RUF22RUF22 PAU20Q08322 120 aa0.02□□□□□ -2.41
RUF22RUF22 YRF1-1P0CX20 1796 aa0.01□□□□□ -2.41
RUF22RUF22 YRF1-5P0CX21 1796 aa0.01□□□□□ -2.41
RUF22RUF22 YRF1-8P0CX22 1796 aa0.01□□□□□ -2.41
RUF22RUF22 AIM19P40502 157 aa0.01□□□□□ -2.41
RUF22RUF22 YMR090WQ04304 227 aaKnown RBP0.01□□□□□ -2.41
RUF22RUF22 MIC10Q96VH5 97 aa0.01□□□□□ -2.41
RUF22RUF22 YFR009W-AP0C5M9 85 aa0□□□□□ -2.41
RUF22RUF22 UBC4P15731 148 aa0□□□□□ -2.41
RUF22RUF22 KRE5P22023 1365 aa0□□□□□ -2.41
RUF22RUF22 PDX3P38075 228 aaKnown RBP0□□□□□ -2.41
RUF22RUF22 RSM18P40033 138 aa0□□□□□ -2.41
RUF22RUF22 TY3B-IQ7LHG5 1498 aaKnown RBP0□□□□□ -2.41
RUF22RUF22 UBC5P15732 148 aa-0.01□□□□□ -2.41
RUF22RUF22 YBR016WP38216 128 aa-0.01□□□□□ -2.41
RUF22RUF22 RPC10P40422 70 aa-0.01□□□□□ -2.41
RUF22RUF22 RPL38P49167 78 aaKnown RBP-0.01□□□□□ -2.41
RUF22RUF22 MIX14Q04341 121 aa-0.01□□□□□ -2.41
RUF22RUF22 YMR103CQ04436 120 aa-0.01□□□□□ -2.41
RUF22RUF22 MDS3P53094 1487 aa-0.02□□□□□ -2.41
RUF22RUF22 PAU1P0CE88 120 aa-0.02□□□□□ -2.41
RUF22RUF22 PAU14P0CE89 120 aa-0.02□□□□□ -2.41
RUF22RUF22 PAU6P0CE90 120 aa-0.02□□□□□ -2.41
RUF22RUF22 PAU18P0CE91 120 aa-0.02□□□□□ -2.41
RUF22RUF22 PAU8P0CE92 120 aa-0.02□□□□□ -2.41
RUF22RUF22 PAU11P0CE93 120 aa-0.02□□□□□ -2.41
RUF22RUF22 ROX3P25046 220 aa-0.02□□□□□ -2.41
RUF22RUF22 PAU13P38725 120 aa-0.02□□□□□ -2.41
RUF22RUF22 PAU10Q03050 120 aa-0.02□□□□□ -2.41
RUF22RUF22 SGF11Q03067 99 aa-0.02□□□□□ -2.41
RUF22RUF22 PAU9Q3E770 120 aa-0.02□□□□□ -2.41
RUF22RUF22 YNR034W-AQ3E841 98 aa-0.02□□□□□ -2.41
RUF22RUF22 TSC11P40061 1430 aa-0.03□□□□□ -2.41
RUF22RUF22 GEA1P47102 1408 aaPredicted RBP-0.03□□□□□ -2.41
RUF22RUF22 TY1B-BRQ12193 1756 aa-0.03□□□□□ -2.41
RUF22RUF22 YBL071CP38185 102 aa-0.03□□□□□ -2.41
RUF22RUF22 YBR090CP38253 122 aa-0.03□□□□□ -2.41
RUF22RUF22 YHL005CP38752 130 aa-0.03□□□□□ -2.41
RUF22RUF22 EMC5P40540 141 aa-0.03□□□□□ -2.41
RUF22RUF22 PAU5P43575 122 aa-0.03□□□□□ -2.41
RUF22RUF22 RPS12P48589 143 aaKnown RBP-0.03□□□□□ -2.41
RUF22RUF22 CAT8P39113 1433 aa-0.04□□□□□ -2.42
RUF22RUF22 BUD4P47136 1447 aa-0.04□□□□□ -2.42
RUF22RUF22 YJR107C-AP0CT86 78 aa-0.04□□□□□ -2.42
RUF22RUF22 COX7P10174 60 aa-0.04□□□□□ -2.42
RUF22RUF22 YIL134C-AQ45U18 67 aa-0.04□□□□□ -2.42
RUF22RUF22 LHP1P33399 275 aaKnown RBP-0.05□□□□□ -2.42
RUF22RUF22 PAU4P53427 120 aa-0.05□□□□□ -2.42
RUF22RUF22 RSM19P53733 91 aaPredicted RBP-0.05□□□□□ -2.42
RUF22RUF22 PDR11P40550 1411 aa-0.05□□□□□ -2.42
RUF22RUF22 RSF2P46974 1380 aa-0.06□□□□□ -2.42
RUF22RUF22 TY1B-LR3P0C2I6 1755 aaKnown RBP-0.06□□□□□ -2.42
RUF22RUF22 TY1B-PR3P0C2J1 1755 aaKnown RBP-0.06□□□□□ -2.42
RUF22RUF22 REV3P14284 1504 aa-0.06□□□□□ -2.42
RUF22RUF22 RGI1P40043 161 aaPredicted RBP-0.06□□□□□ -2.42
RUF22RUF22 GEA2P39993 1459 aaKnown RBP-0.06□□□□□ -2.42
RUF22RUF22 DNF3Q12674 1656 aa-0.06□□□□□ -2.42
RUF22RUF22 YER137CP40083 148 aaKnown RBP-0.07□□□□□ -2.42
RUF22RUF22 YNL042W-BQ3E7Z2 85 aa-0.07□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms