RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 PFKMP08237 780 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 PDGFRBP09619 1106 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 FGFR1P11362 822 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 SSTR3P32745 418 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-215ENST00000641371 RFC1P35251 1148 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-215ENST00000641371 AIF1P55008 147 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 DR1Q01658 176 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 RNASELQ05823 741 aaKnown RBP10.21□□□□□ -0.77
PHGDH-215ENST00000641371 ORC1Q13415 861 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 MBTPS1Q14703 1052 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 PDK2Q15119 407 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 CCNG2Q16589 344 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 TFDP3Q5H9I0 405 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 BEND6Q5SZJ8 279 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-215ENST00000641371 ZFYVE27Q5T4F4 411 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 SLC39A5Q6ZMH5 540 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 FAM183BPQ6ZVS7 135 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 STRADAQ7RTN6 431 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 NPAS4Q8IUM7 802 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 KLHL7Q8IXQ5 586 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 DCP1BQ8IZD4 617 aaKnown RBP10.21□□□□□ -0.77
PHGDH-215ENST00000641371 SIX6OS1Q8N1H7 587 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 BBOF1Q8ND07 529 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 SLC2A14Q8TDB8 520 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 IRGQQ8WZA9 623 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 SEC14L1Q92503 715 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 CAVIN3Q969G5 261 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 MAGOHBQ96A72 148 aaKnown RBP10.21□□□□□ -0.77
PHGDH-215ENST00000641371 ARMC5Q96C12 935 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 MED10Q9BTT4 135 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 COLEC11Q9BWP8 271 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 AP1M1Q9BXS5 423 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 OSBPL8Q9BZF1 889 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 CXCL16Q9H2A7 254 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 HIPK3Q9H422 1215 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 CNGB3Q9NQW8 809 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 MIOSQ9NXC5 875 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 CHORDC1Q9UHD1 332 aaPredicted RBP10.21□□□□□ -0.77
PHGDH-215ENST00000641371 STAP1Q9ULZ2 295 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 USTQ9Y2C2 406 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 INPP5FQ9Y2H2 1132 aa10.21□□□□□ -0.77
PHGDH-215ENST00000641371 MEIS3P2A8K0S8 358 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 ENPP3O14638 875 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 RAD51CO43502 376 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 PRPSAP2O60256 369 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 LRCH4O75427 683 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 ECEL1O95672 775 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 PDGFRAP16234 1089 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 LMO2P25791 158 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 ADORA2BP29275 332 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 MARCKSL1P49006 195 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 ZNF135P52742 658 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-215ENST00000641371 RNASE9P60153 205 aaKnown RBP10.2□□□□□ -0.78
PHGDH-215ENST00000641371 RBM10P98175 930 aaKnown RBP10.2□□□□□ -0.78
PHGDH-215ENST00000641371 SLC25A11Q02978 314 aaKnown RBP10.2□□□□□ -0.78
PHGDH-215ENST00000641371 CAV1Q03135 178 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 YWHAHQ04917 246 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-215ENST00000641371 ZNF211Q13398 564 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-215ENST00000641371 TFDP2Q14188 446 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 NFE2Q16621 373 aaPredicted RBP10.2□□□□□ -0.78
PHGDH-215ENST00000641371 PTPROQ16827 1216 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 TIGD5Q53EQ6 642 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 C2CD6Q53TS8 623 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 INTS6LQ5JSJ4 861 aaKnown RBP10.2□□□□□ -0.78
PHGDH-215ENST00000641371 SPDYCQ5MJ68 293 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 OVOS1Q6IE37 1185 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 PMF1Q6P1K2 205 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 FAM171BQ6P995 826 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 BEND5Q7L4P6 421 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 FAM35AQ86V20 835 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 OSTM1Q86WC4 334 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 COLGALT2Q8IYK4 626 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 FUKQ8N0W3 1084 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 GOLGA6L1Q8N7Z2 621 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 RXFP2Q8WXD0 754 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 LRRC45Q96CN5 670 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 FUBP3Q96I24 572 aaKnown RBP eCLIP10.2□□□□□ -0.78
PHGDH-215ENST00000641371 ZNF333Q96JL9 665 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 TRIM7Q9C029 511 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 DDX47Q9H0S4 455 aaKnown RBP10.2□□□□□ -0.78
PHGDH-215ENST00000641371 DPEP3Q9H4B8 488 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 EPB41L5Q9HCM4 733 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 EHD2Q9NZN4 543 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 STK39Q9UEW8 545 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 USP18Q9UMW8 372 aa10.2□□□□□ -0.78
PHGDH-215ENST00000641371 OR6C75A6NL08 312 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 BHMG1C9JSJ3 638 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 F8VP50 259 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 MDM4O15151 490 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 PAPSS1O43252 624 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 PQBP1O60828 265 aaKnown RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 NBNO60934 754 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 DAB1O75553 588 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 AP1G2O75843 785 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 CCDC130P13994 396 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 ZFXP17010 805 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 NOS2P35228 1153 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 COILP38432 576 aaPredicted RBP10.19□□□□□ -0.78
PHGDH-215ENST00000641371 GJA8P48165 433 aa10.19□□□□□ -0.78
PHGDH-215ENST00000641371 TAS2R40P59535 323 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms