RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 ZBED8Q8IZ13 594 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 GSTCDQ8NEC7 633 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ARHGEF26Q96DR7 871 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 THAP11Q96EK4 314 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 PRR11Q96HE9 360 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 CAAP1Q9H8G2 361 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ARHGEF35A5YM69 484 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 SOWAHBA6NEL2 793 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 TISP43B9A030 160 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ABLIM1O14639 778 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 GSC2O15499 205 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ADCY6O43306 1168 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 PHF2O75151 1096 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 AKAP3O75969 853 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 FAM13AO94988 1023 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 TRIM49P0CI25 452 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 TRIM49CP0CI26 452 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 CHRNA3P32297 505 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 SOX10P56693 466 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 BMT2Q1RMZ1 405 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 FIGNQ5HY92 759 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 DUPD1Q68J44 220 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ZNF572Q7Z3I7 529 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 SLC7A5P1Q8MH63 180 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 RNF148Q8N7C7 305 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 C1orf131Q8NDD1 294 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ATP8B4Q8TF62 1192 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 TRAIPQ9BWF2 469 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 PARVGQ9HBI0 331 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 RBPJLQ9UBG7 517 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 EFR3BQ9Y2G0 817 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 FTLP02792 175 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 PGK2P07205 417 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 TCN1P20061 433 aaPredicted RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 COMTP21964 271 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 EMC10Q5UCC4 262 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 RNF43Q68DV7 783 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 RINLQ6ZS11 566 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ASRGL1Q7L266 308 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 CPNE8Q86YQ8 564 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 RIOX2Q8IUF8 465 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 SLC13A1Q9BZW2 595 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 TRNAU1APQ9NX07 287 aaKnown RBP12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 TAS2R14Q9NYV8 317 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 ANKFY1Q9P2R3 1169 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 AGTPBP1Q9UPW5 1226 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 FRMD4BQ9Y2L6 1034 aa12.38□□□□□ -0.43
RBFOX1-224ENST00000641259 STBD1O95210 358 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 KRT10P13645 584 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 MUTP22033 750 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 KPNA1P52294 538 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 TMPRSS15P98073 1019 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 DHX34Q14147 1143 aaKnown RBP12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 PARP6Q2NL67 630 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 TMEM259Q4ZIN3 620 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 PPP6R3Q5H9R7 873 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 RAPH1Q70E73 1250 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 ZNF720Q7Z2F6 126 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 PPP2R3CQ969Q6 453 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 GPRASP2Q96D09 838 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 TSSK1BQ9BXA7 367 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 TUT1Q9H6E5 874 aaKnown RBP12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 SCINQ9Y6U3 715 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 TTLL13PA6NNM8 815 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 NUDT17P0C025 328 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 CYP2C8P10632 490 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 PMLP29590 882 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 PPIL2Q13356 520 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 DRAP1Q14919 205 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 ODR4Q5SWX8 454 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 KRT80Q6KB66 452 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 FOXR2Q6PJQ5 311 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 CLNKQ7Z7G1 428 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 PRPF39Q86UA1 669 aaKnown RBP12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 CCDC60Q8IWA6 550 aaPredicted RBP12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 GDPD5Q8WTR4 605 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 TMEM120AQ9BXJ8 343 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 PPM1HQ9ULR3 514 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 CLEC11AQ9Y240 323 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 ZNF510Q9Y2H8 683 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 TRIM17Q9Y577 477 aa12.37□□□□□ -0.43
RBFOX1-224ENST00000641259 ARHGAP10A1A4S6 786 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 PIK3R2O00459 728 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 CDC16Q13042 620 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 PDK3Q15120 406 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 OASLQ15646 514 aaKnown RBP12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 PPP2R5EQ16537 467 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 LDLRAD1Q5T700 205 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 OTOAQ7RTW8 1153 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 ALYREFQ86V81 257 aaKnown RBP12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 ARID3BQ8IVW6 561 aaPredicted RBP12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 MIPEPQ99797 713 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 STRA6Q9BX79 667 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 DNAJC12Q9UKB3 198 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 CAPN8A6NHC0 703 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 WDR64B1ANS9 1081 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 SPATA31C2B4DYI2 1134 aa12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 NOL3O60936 208 aaKnown RBP12.36□□□□□ -0.43
RBFOX1-224ENST00000641259 PHBP35232 272 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms