RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 F9P00740 461 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 FDFT1P37268 417 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 EFTUD2Q15029 972 aaKnown RBP eCLIP18.27■□□□□ 0.52
SCARB2-223ENST00000640640 ZNF662Q6ZS27 426 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 TMC3Q7Z5M5 1100 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 RIOX2Q8IUF8 465 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 E2F7Q96AV8 911 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 DCLK3Q9C098 648 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 VAV3Q9UKW4 847 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 L3MBTL1Q9Y468 752 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 LMO7Q8WWI1 1683 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 THP07101 528 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 VCPP55072 806 aaKnown RBP18.27■□□□□ 0.52
SCARB2-223ENST00000640640 AP2B1P63010 937 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 SREBF2Q12772 1141 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 RGS9BPQ6ZS82 235 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 SLFN11Q7Z7L1 901 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 RNF180Q86T96 592 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 CCDC33Q8N5R6 958 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 IRF6O14896 467 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 GLRA2P23416 452 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 ESRRGP62508 458 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 ARMC2Q8NEN0 867 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 SLITRK1Q96PX8 696 aa18.27■□□□□ 0.52
SCARB2-223ENST00000640640 CASZ1Q86V15 1759 aa18.27■□□□□ 0.51
SCARB2-223ENST00000640640 NID2Q14112 1375 aa18.27■□□□□ 0.51
SCARB2-223ENST00000640640 RPL21P46778 160 aaKnown RBP18.27■□□□□ 0.51
SCARB2-223ENST00000640640 CUL3Q13618 768 aa18.27■□□□□ 0.51
SCARB2-223ENST00000640640 ZNF268Q14587 947 aaPredicted RBP18.27■□□□□ 0.51
SCARB2-223ENST00000640640 IL31Q6EBC2 164 aa18.27■□□□□ 0.51
SCARB2-223ENST00000640640 MFSD7Q6UXD7 560 aa18.27■□□□□ 0.51
SCARB2-223ENST00000640640 CHSY1Q86X52 802 aa18.27■□□□□ 0.51
SCARB2-223ENST00000640640 TMEM139Q8IV31 216 aa18.27■□□□□ 0.51
SCARB2-223ENST00000640640 SLC26A7Q8TE54 656 aa18.27■□□□□ 0.51
SCARB2-223ENST00000640640 CDCA5Q96FF9 252 aa18.27■□□□□ 0.51
SCARB2-223ENST00000640640 FAM111AQ96PZ2 611 aa18.27■□□□□ 0.51
SCARB2-223ENST00000640640 MRPL40Q9NQ50 206 aaKnown RBP18.27■□□□□ 0.51
SCARB2-223ENST00000640640 E2F8A0AVK6 867 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 AGGF1Q8N302 714 aaeCLIP18.26■□□□□ 0.51
SCARB2-223ENST00000640640 DDX50Q9BQ39 737 aaKnown RBP18.26■□□□□ 0.51
SCARB2-223ENST00000640640 PCDH9Q9HC56 1237 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 NDFIP2Q9NV92 336 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 ZC3H4Q9UPT8 1303 aaKnown RBP18.26■□□□□ 0.51
SCARB2-223ENST00000640640 PLA2G6O60733 806 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 FCGRTP55899 365 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 TMEM132BQ14DG7 1078 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 NPY5RQ15761 445 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 MDH1BQ5I0G3 518 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 PPP1R36Q96LQ0 422 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 NDE1Q9NXR1 346 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 ORC6Q9Y5N6 252 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 SETSIPP0DME0 302 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 ERFP50548 548 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 BST2Q10589 180 aaKnown RBP18.26■□□□□ 0.51
SCARB2-223ENST00000640640 HIC1Q14526 733 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 RABGAP1LQ5R372 815 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 SHC3Q92529 594 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 PPP1R2P1Q96PQ5 205 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 TMEM134Q9H6X4 195 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 HACD3Q9P035 362 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 LACTBL1A8MY62 500 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 NEMP1O14524 444 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 EIF4BP23588 611 aaKnown RBP18.26■□□□□ 0.51
SCARB2-223ENST00000640640 ITGB3BPQ13352 177 aaPredicted RBP18.26■□□□□ 0.51
SCARB2-223ENST00000640640 DGKZQ13574 1117 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 SLC27A1Q6PCB7 646 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 ARID3BQ8IVW6 561 aaPredicted RBP18.26■□□□□ 0.51
SCARB2-223ENST00000640640 DDIASQ8IXT1 998 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 FAM71AQ8IYT1 594 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 SPDYE1Q8NFV5 336 aaPredicted RBP18.26■□□□□ 0.51
SCARB2-223ENST00000640640 LNX1Q8TBB1 728 aaPredicted RBP18.26■□□□□ 0.51
SCARB2-223ENST00000640640 DRC3Q9H069 523 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 DNAJC18Q9H819 358 aa18.26■□□□□ 0.51
SCARB2-223ENST00000640640 REXO2Q9Y3B8 237 aaKnown RBP18.26■□□□□ 0.51
SCARB2-223ENST00000640640 DENND5BQ6ZUT9 1274 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 IRF2BP2Q7Z5L9 587 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 NKX2-3Q8TAU0 364 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 SH3TC2Q8TF17 1288 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 GIPC2Q8TF65 315 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 DNAJB3Q8WWF6 145 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 FGFBP2Q9BYJ0 223 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 GDF3Q9NR23 364 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 WDR70Q9NW82 654 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 TSR3Q9UJK0 312 aaKnown RBP18.25■□□□□ 0.51
SCARB2-223ENST00000640640 MTO1Q9Y2Z2 717 aaKnown RBP18.25■□□□□ 0.51
SCARB2-223ENST00000640640 CORO7P57737 925 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 IMPG1Q17R60 797 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 SLC25A41Q8N5S1 370 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 TSPAN17Q96FV3 270 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 NAT9Q9BTE0 207 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 TRIM15Q9C019 465 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 NSMCE4AQ9NXX6 385 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 PMPCBO75439 489 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 GJB6O95452 261 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 NFIL3Q16649 462 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 C3orf20Q8ND61 904 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 CALML6Q8TD86 181 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 L3MBTL3Q96JM7 780 aaPredicted RBP18.25■□□□□ 0.51
SCARB2-223ENST00000640640 THEGQ9P2T0 379 aa18.25■□□□□ 0.51
SCARB2-223ENST00000640640 SHOC2Q9UQ13 582 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms