RNA–Protein interactions for RNA: ENST00000640135.1

SCN1B-208, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1B, Length 4,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-208ENST00000640135 ROPN1Q9HAT0 212 aaPredicted RBP11.46□□□□□ -0.57
SCN1B-208ENST00000640135 C20orf96Q9NUD7 363 aaPredicted RBP11.46□□□□□ -0.57
SCN1B-208ENST00000640135 VPS28Q9UK41 221 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 FAM50BQ9Y247 325 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 DRG1Q9Y295 367 aaKnown RBP11.46□□□□□ -0.57
SCN1B-208ENST00000640135 ZNF142P52746 1687 aaPredicted RBP11.46□□□□□ -0.57
SCN1B-208ENST00000640135 CA12O43570 354 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 OPHN1O60890 802 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 MYL4P12829 197 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 PCSK7Q16549 785 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 ADCK2Q7Z695 626 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 TEKT4Q8WW24 435 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 ADGRE3Q9BY15 652 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 STK39Q9UEW8 545 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 FBXL5Q9UKA1 691 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 CLCA2Q9UQC9 943 aa11.46□□□□□ -0.57
SCN1B-208ENST00000640135 A0A0A6YYK5 440 aaPredicted RBP11.46□□□□□ -0.58
SCN1B-208ENST00000640135 UNCXA6NJT0 531 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 IGF2BP3O00425 579 aaKnown RBP eCLIP11.46□□□□□ -0.58
SCN1B-208ENST00000640135 SYF2O95926 243 aaKnown RBP11.46□□□□□ -0.58
SCN1B-208ENST00000640135 SNRPAP09012 282 aaKnown RBP11.46□□□□□ -0.58
SCN1B-208ENST00000640135 SERPINB4P48594 390 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 ESRRGP62508 458 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 HABP4Q5JVS0 413 aaKnown RBP11.46□□□□□ -0.58
SCN1B-208ENST00000640135 DDIASQ8IXT1 998 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 ABRAQ8N0Z2 381 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 NMRK1Q9NWW6 199 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 TNFSF13BQ9Y275 285 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 AKAP3O75969 853 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.58
SCN1B-208ENST00000640135 AARSP49588 968 aaKnown RBP eCLIP11.46□□□□□ -0.58
SCN1B-208ENST00000640135 MAP3K7CLP57077 242 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 ZRANB3Q5FWF4 1079 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 CXCL17Q6UXB2 119 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 COG1Q8WTW3 980 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 FAM172AQ8WUF8 416 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 ELMO2Q96JJ3 720 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 MYCBPQ99417 103 aaPredicted RBP11.46□□□□□ -0.58
SCN1B-208ENST00000640135 ZSWIM1Q9BR11 485 aa11.46□□□□□ -0.58
SCN1B-208ENST00000640135 MRPL17Q9NRX2 175 aaKnown RBP11.46□□□□□ -0.58
SCN1B-208ENST00000640135 BCL9LQ86UU0 1499 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 ZW10O43264 779 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 DIAPH2O60879 1101 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 ALDH1A2O94788 518 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 SNCBQ16143 134 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 LRIG3Q6UXM1 1119 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 SLC13A5Q86YT5 568 aaPredicted RBP11.45□□□□□ -0.58
SCN1B-208ENST00000640135 DNAJC7Q99615 494 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 TACO1Q9BSH4 297 aaKnown RBP11.45□□□□□ -0.58
SCN1B-208ENST00000640135 HAUS5O94927 633 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 CRTAMO95727 393 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 ITGALP20701 1170 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 CASP4P49662 377 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 RTP1P59025 263 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 ACAP1Q15027 740 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 TFDP3Q5H9I0 405 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 JAMLQ86YT9 394 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 STAMBPL1Q96FJ0 436 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 SGSM3Q96HU1 749 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 ATP6V1G3Q96LB4 118 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 ELAC2Q9BQ52 826 aaKnown RBP11.45□□□□□ -0.58
SCN1B-208ENST00000640135 CELF4Q9BZC1 486 aaKnown RBP11.45□□□□□ -0.58
SCN1B-208ENST00000640135 SYNDIG1Q9H7V2 258 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 YY1AP1Q9H869 796 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 SF3B1O75533 1304 aaKnown RBP eCLIP11.45□□□□□ -0.588e-6■■■■■ 107
SCN1B-208ENST00000640135 SPATA31C2B4DYI2 1134 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 RHOAP61586 193 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 MTF1Q14872 753 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 SLAIN1Q8ND83 568 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 CYP2W1Q8TAV3 490 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 SEMA6BQ9H3T3 888 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 TRABDQ9H4I3 376 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 GIMAP4Q9NUV9 329 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 PHLPP1O60346 1717 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 COL1A2P08123 1366 aa11.45□□□□□ -0.58
SCN1B-208ENST00000640135 ESYT3A0FGR9 886 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 PHF20L1A8MW92 1017 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 SOAT2O75908 522 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 DNAJC8O75937 253 aaPredicted RBP11.44□□□□□ -0.58
SCN1B-208ENST00000640135 SGPL1O95470 568 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 ACADMP11310 421 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 RPL9P32969 192 aaKnown RBP11.44□□□□□ -0.58
SCN1B-208ENST00000640135 CRYBB1P53674 252 aaPredicted RBP11.44□□□□□ -0.58
SCN1B-208ENST00000640135 SESN3P58005 492 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 PRKCQQ04759 706 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 EPC2Q52LR7 807 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 RRM2BQ7LG56 351 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 NECAB2Q7Z6G3 386 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 CARNMT1Q8N4J0 409 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 SLC25A41Q8N5S1 370 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 TPCN2Q8NHX9 752 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 SRPK1Q96SB4 655 aaKnown RBP11.44□□□□□ -0.58
SCN1B-208ENST00000640135 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.44□□□□□ -0.58
SCN1B-208ENST00000640135 COG4Q9H9E3 785 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.44□□□□□ -0.58
SCN1B-208ENST00000640135 AP4E1Q9UPM8 1137 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 RIC1Q4ADV7 1423 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 GYG2O15488 501 aa11.44□□□□□ -0.58
SCN1B-208ENST00000640135 H2AFYO75367 372 aaKnown RBP11.44□□□□□ -0.58
SCN1B-208ENST00000640135 MAFO75444 373 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms