RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 RAB32Q13637 225 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 PPP2R5AQ15172 486 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 MTX3Q5HYI7 312 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 KIAA1614Q5VZ46 1190 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 CXorf57Q6NSI4 855 aaKnown RBP5.96□□□□□ -1.46
CCDC7-216ENST00000640058 ZDHHC24Q6UX98 284 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 TRIM72Q6ZMU5 477 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 CAND1Q86VP6 1230 aaKnown RBP5.96□□□□□ -1.46
CCDC7-216ENST00000640058 GAS2L3Q86XJ1 694 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 IZUMO1Q8IYV9 350 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 ABHD11Q8NFV4 315 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 RP9Q8TA86 221 aaKnown RBP5.96□□□□□ -1.46
CCDC7-216ENST00000640058 SMG7Q92540 1137 aaKnown RBP5.96□□□□□ -1.46
CCDC7-216ENST00000640058 ANKS1AQ92625 1134 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 PPP2R3CQ969Q6 453 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 DPH1Q9BZG8 443 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 GBA2Q9HCG7 927 aaPredicted RBP5.96□□□□□ -1.46
CCDC7-216ENST00000640058 SACM1LQ9NTJ5 587 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 TRMT13Q9NUP7 481 aaKnown RBP5.96□□□□□ -1.46
CCDC7-216ENST00000640058 ZSCAN32Q9NX65 697 aa5.96□□□□□ -1.46
CCDC7-216ENST00000640058 CFAP69A5D8W1 941 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 EN2P19622 333 aaPredicted RBP5.95□□□□□ -1.46
CCDC7-216ENST00000640058 FPR3P25089 353 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 SUMO3P55854 103 aaPredicted RBP5.95□□□□□ -1.46
CCDC7-216ENST00000640058 TUBA4AP68366 448 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 HOXA4Q00056 320 aaPredicted RBP5.95□□□□□ -1.46
CCDC7-216ENST00000640058 MLC1Q15049 377 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 CNN3Q15417 329 aaKnown RBP5.95□□□□□ -1.46
CCDC7-216ENST00000640058 ARHGAP29Q52LW3 1261 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 CEP78Q5JTW2 689 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 FAM102BQ5T8I3 360 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 ZNF626Q68DY1 528 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 YTHDF3Q7Z739 585 aaKnown RBP5.95□□□□□ -1.46
CCDC7-216ENST00000640058 CHSY1Q86X52 802 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 OR56A3Q8NH54 315 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 JDP2Q8WYK2 163 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 LENG8Q96PV6 779 aaPredicted RBP5.95□□□□□ -1.46
CCDC7-216ENST00000640058 QTRT1Q9BXR0 403 aaKnown RBP5.95□□□□□ -1.46
CCDC7-216ENST00000640058 C22orf23Q9BZE7 217 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 STK32BQ9NY57 414 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 CPNE7Q9UBL6 633 aa5.95□□□□□ -1.46
CCDC7-216ENST00000640058 ZNF70Q9UC06 446 aaPredicted RBP5.95□□□□□ -1.46
CCDC7-216ENST00000640058 A6NNZ2 444 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 PRRT4C9JH25 899 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 FAM227AF5H4B4 570 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 MARCH6O60337 910 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 BRAFP15056 766 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 E2F1Q01094 437 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 CYP1B1Q16678 543 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 MINDY4Q4G0A6 757 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 SLC44A4Q53GD3 710 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 CACHD1Q5VU97 1274 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 PAPD7Q5XG87 772 aaKnown RBP5.94□□□□□ -1.46
CCDC7-216ENST00000640058 FCRL6Q6DN72 434 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 APOA5Q6Q788 366 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 SPARTQ8N0X7 666 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 DNAJB14Q8TBM8 379 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 DAZAP1Q96EP5 407 aaKnown RBP5.94□□□□□ -1.46
CCDC7-216ENST00000640058 PRR25Q96S07 402 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 C17orf80Q9BSJ5 609 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 TMEM60Q9H2L4 133 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 DDX20Q9UHI6 824 aaKnown RBP5.94□□□□□ -1.46
CCDC7-216ENST00000640058 EID1Q9Y6B2 187 aa5.94□□□□□ -1.46
CCDC7-216ENST00000640058 SRGAP2O75044 1071 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 LATS1O95835 1130 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 DLDP09622 509 aaKnown RBP5.93□□□□□ -1.46
CCDC7-216ENST00000640058 KELP23276 732 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 ALDH5A1P51649 535 aaPredicted RBP5.93□□□□□ -1.46
CCDC7-216ENST00000640058 ITGA8P53708 1063 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 NFE2Q16621 373 aaPredicted RBP5.93□□□□□ -1.46
CCDC7-216ENST00000640058 TBC1D25Q3MII6 688 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 SUPT20HL1Q3ZLR7 823 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 KIRREL2Q6UWL6 708 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 KCTD20Q7Z5Y7 419 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 GLCCI1Q86VQ1 547 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 KIAA0319LQ8IZA0 1049 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 ZNF518BQ9C0D4 1074 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 G3BP2Q9UN86 482 aaKnown RBP5.93□□□□□ -1.46
CCDC7-216ENST00000640058 GABRQQ9UN88 632 aa5.93□□□□□ -1.46
CCDC7-216ENST00000640058 MYO1FO00160 1098 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 RASSF9O75901 435 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 TJP3O95049 919 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 RASAL1O95294 804 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 U2AF1L5P0DN76 240 aaPredicted RBP5.92□□□□□ -1.46
CCDC7-216ENST00000640058 ZKSCAN1P17029 563 aaPredicted RBP5.92□□□□□ -1.46
CCDC7-216ENST00000640058 U2AF1Q01081 240 aaKnown RBP eCLIP5.92□□□□□ -1.46
CCDC7-216ENST00000640058 C3orf38Q5JPI3 329 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 CERCAMQ5T4B2 595 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 LRCH2Q5VUJ6 765 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 SLC18B1Q6NT16 456 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 SLC2A7Q6PXP3 512 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 SERPINA13PQ6UXR4 307 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 MAGEB6Q8N7X4 407 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 TERB1Q8NA31 727 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 SPSB4Q96A44 273 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 C5orf34Q96MH7 638 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 C1QTNF7Q9BXJ2 289 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 STK31Q9BXU1 1019 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 CIPCQ9C0C6 399 aa5.92□□□□□ -1.46
CCDC7-216ENST00000640058 NRIP3Q9NQ35 241 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms