RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 PRR23CQ6ZRP0 262 aa18■□□□□ 0.47
SMN2-216ENST00000638794 HS2ST1Q7LGA3 356 aa18■□□□□ 0.47
SMN2-216ENST00000638794 ATP2A3Q93084 1043 aa18■□□□□ 0.47
SMN2-216ENST00000638794 SNX21Q969T3 373 aa18■□□□□ 0.47
SMN2-216ENST00000638794 CEP295NLQ96MC4 621 aa18■□□□□ 0.47
SMN2-216ENST00000638794 SNX25Q9H3E2 840 aa18■□□□□ 0.47
SMN2-216ENST00000638794 ARHGAP26Q9UNA1 814 aa18■□□□□ 0.47
SMN2-216ENST00000638794 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.99■□□□□ 0.47
SMN2-216ENST00000638794 CCDC163A0A0D9SF12 145 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.99■□□□□ 0.47
SMN2-216ENST00000638794 TRIM66O15016 1216 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 ZSCAN22P10073 491 aaPredicted RBP17.99■□□□□ 0.47
SMN2-216ENST00000638794 TCF3P15923 654 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 GNL1P36915 607 aaPredicted RBP17.99■□□□□ 0.47
SMN2-216ENST00000638794 TNNC1P63316 161 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 ZXDBP98169 803 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 CUL4BQ13620 913 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 BMT2Q1RMZ1 405 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 WDR72Q3MJ13 1102 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 OR6B3Q8NGW1 331 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 NETO1Q8TDF5 533 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 GAB3Q8WWW8 586 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 ZNF516Q92618 1163 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 EZH1Q92800 747 aaPredicted RBP17.99■□□□□ 0.47
SMN2-216ENST00000638794 CD101Q93033 1021 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 EXOC4Q96A65 974 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 LINC00597Q9H2U6 94 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 DPEP3Q9H4B8 488 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 SLC39A2Q9NP94 309 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 TRPM5Q9NZQ8 1165 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 PCDHA7Q9UN72 937 aa17.99■□□□□ 0.47
SMN2-216ENST00000638794 LAMA1P25391 3075 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 F8VP50 259 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 RPP40O75818 363 aaKnown RBP17.98■□□□□ 0.47
SMN2-216ENST00000638794 F13A1P00488 732 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 AFMP43652 599 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 ME1P48163 572 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 PDE6CP51160 858 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 CACNA2D1P54289 1103 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 NOP14P78316 857 aaKnown RBP17.98■□□□□ 0.47
SMN2-216ENST00000638794 FBXO43Q4G163 708 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 RESP18Q5W5W9 173 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 C12orf56Q8IXR9 622 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 RPLP0P6Q8NHW5 317 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 C8orf48Q96LL4 319 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 HHIPQ96QV1 700 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 TTLL2Q9BWV7 592 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 TMEM30AQ9NV96 361 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 FAM13BQ9NYF5 915 aa17.98■□□□□ 0.47
SMN2-216ENST00000638794 PVALEFA0A1B0GWK0 134 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 ZNF840PA6NDX5 716 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 SLC30A4O14863 429 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 GDF9O60383 454 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 STAU1O95793 577 aaKnown RBP17.97■□□□□ 0.47
SMN2-216ENST00000638794 CCDC192P0DO97 292 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 PTPN1P18031 435 aaKnown RBP17.97■□□□□ 0.47
SMN2-216ENST00000638794 CASP4P49662 377 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 MYL6P60660 151 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 TRPC3Q13507 836 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 KNOP1Q1ED39 458 aaKnown RBP17.97■□□□□ 0.47
SMN2-216ENST00000638794 CACNA2D4Q7Z3S7 1137 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 KBTBD6Q86V97 674 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 GRAMD1CQ8IYS0 662 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 CAMKK1Q8N5S9 505 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 ZNF518BQ9C0D4 1074 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 XYLT2Q9H1B5 865 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 EHD2Q9NZN4 543 aa17.97■□□□□ 0.47
SMN2-216ENST00000638794 CGNQ9P2M7 1197 aaKnown RBP17.97■□□□□ 0.47
SMN2-216ENST00000638794 NXF1Q9UBU9 619 aaKnown RBP17.97■□□□□ 0.47
SMN2-216ENST00000638794 TPRP12270 2363 aaKnown RBP17.96■□□□□ 0.47
SMN2-216ENST00000638794 LEFTY2O00292 366 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 AXIN1O15169 862 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 EXOC3O60645 756 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 NFATC1O95644 943 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 FAM163BP0C2L3 166 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 PFKLP17858 780 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 NR1H3Q13133 447 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 SYT13Q7L8C5 426 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 B3GALNT2Q8NCR0 500 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 PLEKHO2Q8TD55 490 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 B3GNT5Q9BYG0 378 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 ELOVL4Q9GZR5 314 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 RNF38Q9H0F5 515 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 ARRDC1-AS1Q9H2J1 176 aa17.96■□□□□ 0.47
SMN2-216ENST00000638794 MYOFQ9NZM1 2061 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 A8MXQ7 604 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 CLDN5O00501 218 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 AKAP3O75969 853 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 EPN2O95208 641 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 OLFM2O95897 454 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 ABL1P00519 1130 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 HSP90AA1P07900 732 aaKnown RBP17.95■□□□□ 0.46
SMN2-216ENST00000638794 ATICP31939 592 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 RAP1GAPP47736 663 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 PPP3CCP48454 512 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 SLC7A9P82251 487 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 IFRD2Q12894 506 aaPredicted RBP17.95■□□□□ 0.46
SMN2-216ENST00000638794 TAF10Q12962 218 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 PSMD2Q13200 908 aa17.95■□□□□ 0.46
SMN2-216ENST00000638794 PKP1Q13835 747 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms