RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 ARVCFO00192 962 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 BEST1O76090 585 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 PDGFRAP16234 1089 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 GPD1P21695 349 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 MIPP30301 263 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 MTFR1Q15390 333 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 TIGD5Q53EQ6 642 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 MDH1BQ5I0G3 518 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 DSTYKQ6XUX3 929 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 TMEM110Q86TL2 294 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 TNIP3Q96KP6 325 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 PEBP4Q96S96 227 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 DCLK3Q9C098 648 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 RAB17Q9H0T7 212 aa22.77■■□□□ 1.23
CHRNA7-228ENST00000637519 KBTBD13C9JR72 458 aa22.76■■□□□ 1.23
CHRNA7-228ENST00000637519 GABRDO14764 452 aa22.76■■□□□ 1.23
CHRNA7-228ENST00000637519 BRCC3P46736 316 aa22.76■■□□□ 1.23
CHRNA7-228ENST00000637519 ATP11AP98196 1134 aa22.76■■□□□ 1.23
CHRNA7-228ENST00000637519 LRRC38Q5VT99 294 aa22.76■■□□□ 1.23
CHRNA7-228ENST00000637519 SPOCD1Q6ZMY3 1216 aa22.76■■□□□ 1.23
CHRNA7-228ENST00000637519 KHSRPQ92945 711 aaKnown RBP eCLIP22.76■■□□□ 1.23
CHRNA7-228ENST00000637519 HAUS1Q96CS2 278 aa22.76■■□□□ 1.23
CHRNA7-228ENST00000637519 RBM41Q96IZ5 413 aaKnown RBP22.76■■□□□ 1.23
CHRNA7-228ENST00000637519 FAM187AA6NFU0 413 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 POLR3GO15318 223 aaPredicted RBP22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 B4GALT3O60512 393 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 CD48P09326 243 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 SETSIPP0DME0 302 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 PTPN1P18031 435 aaKnown RBP22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 ZNF143P52747 638 aaPredicted RBP22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 PAQR9Q6ZVX9 377 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 ZNF598Q86UK7 904 aaKnown RBP22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 RCOR2Q8IZ40 523 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 NDRG1Q92597 394 aaKnown RBP22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 CRTAC1Q9NQ79 661 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 LCMT1Q9UIC8 334 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 PHF24Q9UPV7 400 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 B3GAT3O94766 335 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 ITGB1P05556 798 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 TFE3P19532 575 aaPredicted RBP22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 RPL21P46778 160 aaKnown RBP22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 FNTAP49354 379 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 SLC6A3Q01959 620 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 ODF2Q5BJF6 829 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 HSPH1Q92598 858 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 VIPAS39Q9H9C1 493 aa22.75■■□□□ 1.23
CHRNA7-228ENST00000637519 C3orf70A6NLC5 250 aaPredicted RBP22.74■■□□□ 1.23
CHRNA7-228ENST00000637519 CDKN2BP42772 138 aa22.74■■□□□ 1.23
CHRNA7-228ENST00000637519 TRIP13Q15645 432 aaPredicted RBP22.74■■□□□ 1.23
CHRNA7-228ENST00000637519 CCDC14Q49A88 953 aa22.74■■□□□ 1.23
CHRNA7-228ENST00000637519 CCDC114Q96M63 670 aa22.74■■□□□ 1.23
CHRNA7-228ENST00000637519 RASAL2Q9UJF2 1139 aa22.74■■□□□ 1.23
CHRNA7-228ENST00000637519 hCG_1818297A0A087WSY0 165 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 AGPSO00116 658 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 ECEL1O95672 775 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 GGCXP38435 758 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 KRT17Q04695 432 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 PRUNE1Q86TP1 453 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 PGBD4Q96DM1 585 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 DEFB118Q96PH6 123 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 USP18Q9UMW8 372 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 MYBPHLA2RUH7 354 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 CAND2O75155 1236 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 RNF8O76064 485 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 DYNLT1P63172 113 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 GRIK3Q13003 919 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 ARHGEF6Q15052 776 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 CD300LGQ6UXG3 332 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 CYP4V2Q6ZWL3 525 aaPredicted RBP22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 POLNQ7Z5Q5 900 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 PIGZQ86VD9 579 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 SYT15Q9BQS2 421 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 CNPY3Q9BT09 278 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 MED10Q9BTT4 135 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 ADAM33Q9BZ11 813 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 FAM114A2Q9NRY5 505 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 SAGE1Q9NXZ1 904 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 GRHL1Q9NZI5 618 aa22.73■■□□□ 1.23
CHRNA7-228ENST00000637519 C9IYK1 514 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 TRUB2O95900 331 aaKnown RBP22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 AARSP49588 968 aaKnown RBP eCLIP22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 PLTPP55058 493 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 NNTQ13423 1086 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 PPP1R7Q15435 360 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 HADHQ16836 314 aaKnown RBP22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 ZDHHC24Q6UX98 284 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 LRRC8DQ7L1W4 858 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 HNRNPABQ99729 332 aaKnown RBP22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 RHOBTB2Q9BYZ6 727 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 NGRNQ9NPE2 291 aaKnown RBP22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 RGS18Q9NS28 235 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 KRT82Q9NSB4 513 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 ZDHHC18Q9NUE0 388 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 ASNSD1Q9NWL6 643 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 DDX56Q9NY93 547 aaKnown RBP22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 SAE1Q9UBE0 346 aaPredicted RBP22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 SQORQ9Y6N5 450 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 TDRD15B5MCY1 1934 aaKnown RBP22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 GOLGA6BA6NDN3 693 aa22.72■■□□□ 1.23
CHRNA7-228ENST00000637519 RPL9P32969 192 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms