RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 FBXO43Q4G163 708 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 MDH1BQ5I0G3 518 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 FOXD4L3Q6VB84 417 aaPredicted RBP19.71■□□□□ 0.75
CLN6-220ENST00000637450 C12orf56Q8IXR9 622 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 TTC16Q8NEE8 873 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 OR6B3Q8NGW1 331 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 C8orf48Q96LL4 319 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 TTLL2Q9BWV7 592 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 LINC00597Q9H2U6 94 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 SLC39A2Q9NP94 309 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 FAM13BQ9NYF5 915 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 TRPM5Q9NZQ8 1165 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 SPTBN2O15020 2390 aa19.71■□□□□ 0.75
CLN6-220ENST00000637450 TRIM66O15016 1216 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 STAU1O95793 577 aaKnown RBP19.7■□□□□ 0.74
CLN6-220ENST00000637450 F13A1P00488 732 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 PTPN1P18031 435 aaKnown RBP19.7■□□□□ 0.74
CLN6-220ENST00000637450 ANXA13P27216 316 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 PDE6CP51160 858 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 ZXDBP98169 803 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 CUL4BQ13620 913 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 RESP18Q5W5W9 173 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 CAMKK1Q8N5S9 505 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 GAB3Q8WWW8 586 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 CD101Q93033 1021 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 POLR3BQ9NW08 1133 aaPredicted RBP19.7■□□□□ 0.74
CLN6-220ENST00000637450 EHD2Q9NZN4 543 aa19.7■□□□□ 0.74
CLN6-220ENST00000637450 DCDC2BA2VCK2 349 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 ZNF840PA6NDX5 716 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 F8VP50 259 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 AFMP43652 599 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 ME1P48163 572 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 PPP3CCP48454 512 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 MYL6P60660 151 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 TNNC1P63316 161 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 NOP14P78316 857 aaKnown RBP19.69■□□□□ 0.74
CLN6-220ENST00000637450 NR1H3Q13133 447 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 TRPC3Q13507 836 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 KNOP1Q1ED39 458 aaKnown RBP19.69■□□□□ 0.74
CLN6-220ENST00000637450 ATL3Q6DD88 541 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 PRR23CQ6ZRP0 262 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 CACNA2D4Q7Z3S7 1137 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 NETO1Q8TDF5 533 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 EZH1Q92800 747 aaPredicted RBP19.69■□□□□ 0.74
CLN6-220ENST00000637450 XYLT2Q9H1B5 865 aa19.69■□□□□ 0.74
CLN6-220ENST00000637450 SLC30A4O14863 429 aa19.68■□□□□ 0.74
CLN6-220ENST00000637450 FOXD2O60548 495 aaPredicted RBP19.68■□□□□ 0.74
CLN6-220ENST00000637450 RPP40O75818 363 aaKnown RBP19.68■□□□□ 0.74
CLN6-220ENST00000637450 ATICP31939 592 aa19.68■□□□□ 0.74
CLN6-220ENST00000637450 PLEKHO2Q8TD55 490 aa19.68■□□□□ 0.74
CLN6-220ENST00000637450 LOXL4Q96JB6 756 aa19.68■□□□□ 0.74
CLN6-220ENST00000637450 RNF38Q9H0F5 515 aa19.68■□□□□ 0.74
CLN6-220ENST00000637450 DPEP3Q9H4B8 488 aa19.68■□□□□ 0.74
CLN6-220ENST00000637450 OBSL1O75147 1896 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.67■□□□□ 0.74
CLN6-220ENST00000637450 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.67■□□□□ 0.74
CLN6-220ENST00000637450 A8MXQ7 604 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 LEFTY2O00292 366 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 AXIN1O15169 862 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 EXOC3O60645 756 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 RAP1GAPP47736 663 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 CACNA2D1P54289 1103 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 SLC7A9P82251 487 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 SYT13Q7L8C5 426 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 GRAMD1CQ8IYS0 662 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 KIAA1958Q8N8K9 716 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 RPLP0P6Q8NHW5 317 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 SYAP1Q96A49 352 aaPredicted RBP19.67■□□□□ 0.74
CLN6-220ENST00000637450 B3GNT5Q9BYG0 378 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 VRTNQ9H8Y1 702 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 TMEM30AQ9NV96 361 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 NXF1Q9UBU9 619 aaKnown RBP19.67■□□□□ 0.74
CLN6-220ENST00000637450 RCOR1Q9UKL0 485 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 CFAP45Q9UL16 551 aa19.67■□□□□ 0.74
CLN6-220ENST00000637450 SDK1Q7Z5N4 2213 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 KLRC4O43908 158 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 GDF9O60383 454 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 AKAP3O75969 853 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 NFATC1O95644 943 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 OLFM2O95897 454 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 SLFN14P0C7P3 912 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 CCDC192P0DO97 292 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 CASP4P49662 377 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 CLDN10P78369 228 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 TAF10Q12962 218 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 TDRD10Q5VZ19 366 aaKnown RBP19.66■□□□□ 0.74
CLN6-220ENST00000637450 KBTBD6Q86V97 674 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 HSCBQ8IWL3 235 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 CEP57L1Q8IYX8 460 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 B3GALNT2Q8NCR0 500 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 GOLGA5Q8TBA6 731 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 PARD3BQ8TEW8 1205 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 ZNF518BQ9C0D4 1074 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 ELOVL4Q9GZR5 314 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 DMAC2Q9NW81 257 aa19.66■□□□□ 0.74
CLN6-220ENST00000637450 ZNF638Q14966 1978 aaKnown RBP19.66■□□□□ 0.74
CLN6-220ENST00000637450 CLDN5O00501 218 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 PHACTR2O75167 634 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 EPN2O95208 641 aa19.65■□□□□ 0.74
CLN6-220ENST00000637450 OAS1P00973 400 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms