RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 DCDC2BA2VCK2 349 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 TRDMT1O14717 391 aaKnown RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 KLRC4O43908 158 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 GCNT3O95395 438 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 POLR2BP30876 1174 aaKnown RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 RPL10AP62906 217 aaKnown RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 KCNA1Q09470 495 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 GRSF1Q12849 480 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTSD-208ENST00000636843 ZNF268Q14587 947 aaPredicted RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 NR1I3Q14994 352 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 KMT5BQ4FZB7 885 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 TMEM196Q5HYL7 178 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 MON1AQ86VX9 555 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 SMYD4Q8IYR2 804 aaPredicted RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 LRRC52Q8N7C0 313 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 ANKRD20A12PQ8NF67 263 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 USP13Q92995 863 aaPredicted RBP13.49□□□□□ -0.25
CTSD-208ENST00000636843 PI4K2AQ9BTU6 479 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 HPS4Q9NQG7 708 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 TMLHEQ9NVH6 421 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 C2orf42Q9NWW7 574 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 ITGA11Q9UKX5 1188 aa13.49□□□□□ -0.25
CTSD-208ENST00000636843 ANK1P16157 1881 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 TPRP12270 2363 aaKnown RBP13.48□□□□□ -0.25
CTSD-208ENST00000636843 CCDC163A0A0D9SF12 145 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 SLC30A4O14863 429 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 ATG13O75143 517 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 ITGB3P05106 788 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 STX17P56962 302 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 MYL7Q01449 175 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 TBX2Q13207 712 aaPredicted RBP13.48□□□□□ -0.25
CTSD-208ENST00000636843 SRSF5Q13243 272 aaKnown RBP13.48□□□□□ -0.25
CTSD-208ENST00000636843 INTS6LQ5JSJ4 861 aaKnown RBP13.48□□□□□ -0.25
CTSD-208ENST00000636843 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 TXNDC8Q6A555 127 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 CC2D1AQ6P1N0 951 aaPredicted RBP13.48□□□□□ -0.25
CTSD-208ENST00000636843 PRR23CQ6ZRP0 262 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 SYCP3Q8IZU3 236 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 CSGALNACT2Q8N6G5 542 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 C1orf127Q8N9H9 656 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 NELFBQ8WX92 580 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 SAAL1Q96ER3 474 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 TRIM9Q9C026 710 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 INTS13Q9NVM9 706 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 GDAP2Q9NXN4 497 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 DDX43Q9NXZ2 648 aaKnown RBP13.48□□□□□ -0.25
CTSD-208ENST00000636843 RBAKQ9NYW8 714 aaPredicted RBP13.48□□□□□ -0.25
CTSD-208ENST00000636843 TBC1D7Q9P0N9 293 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 L1RE1Q9UN81 338 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 MAGED2Q9UNF1 606 aaPredicted RBP13.48□□□□□ -0.25
CTSD-208ENST00000636843 CCL26Q9Y258 94 aa13.48□□□□□ -0.25
CTSD-208ENST00000636843 PSMA7O14818 248 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 CCP110O43303 1012 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 EXTL3O43909 919 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 NOL4O94818 638 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 IDEP14735 1019 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 PCSK1P29120 753 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 PRCPP42785 496 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 LHX1P48742 406 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 GPR15P49685 360 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 WNT7BP56706 349 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 RBP5P82980 135 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 PDGFRLQ15198 375 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 COBLL1Q53SF7 1204 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 FSTL4Q6MZW2 842 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 FAM160A2Q8N612 972 aaPredicted RBP13.47□□□□□ -0.25
CTSD-208ENST00000636843 TOP6BLQ8N6T0 577 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 ZSWIM2Q8NEG5 633 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 EXOC4Q96A65 974 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 TRMT2BQ96GJ1 504 aaKnown RBP13.47□□□□□ -0.25
CTSD-208ENST00000636843 DHTKD1Q96HY7 919 aaPredicted RBP13.47□□□□□ -0.25
CTSD-208ENST00000636843 LOXL4Q96JB6 756 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 MYRFLQ96LU7 910 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 EBF3Q9H4W6 596 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 TMEM206Q9H813 350 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 EXOC1Q9NV70 894 aa13.47□□□□□ -0.25
CTSD-208ENST00000636843 LIMA1Q9UHB6 759 aaKnown RBP13.47□□□□□ -0.25
CTSD-208ENST00000636843 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.46□□□□□ -0.25
CTSD-208ENST00000636843 PVALEFA0A1B0GWK0 134 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 FRMD3A2A2Y4 597 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 LRRC10BA6NIK2 292 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 TULP1O00294 542 aaPredicted RBP13.46□□□□□ -0.25
CTSD-208ENST00000636843 GABRDO14764 452 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 KIAA0391O15091 583 aaKnown RBP13.46□□□□□ -0.25
CTSD-208ENST00000636843 CYP2F1P24903 491 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 DDR2Q16832 855 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 HSP90AA4PQ58FG1 418 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 SDHAF4Q5VUM1 108 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 TRIM68Q6AZZ1 485 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 CNNM4Q6P4Q7 775 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 APTXQ7Z2E3 356 aaKnown RBP13.46□□□□□ -0.25
CTSD-208ENST00000636843 CXorf38Q8TB03 319 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 NOC3LQ8WTT2 800 aaKnown RBP13.46□□□□□ -0.25
CTSD-208ENST00000636843 GAB3Q8WWW8 586 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 FUBP3Q96I24 572 aaKnown RBP eCLIP13.46□□□□□ -0.25
CTSD-208ENST00000636843 PKMYT1Q99640 499 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 PANK4Q9NVE7 773 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 SLC8A2Q9UPR5 921 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 SNX9Q9Y5X1 595 aa13.46□□□□□ -0.25
CTSD-208ENST00000636843 BICDL2A1A5D9 508 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms