RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 PHLDB3Q6NSJ2 640 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 TRIM65Q6PJ69 517 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 GAREM2Q75VX8 874 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 TMC8Q8IU68 726 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 NPAS3Q8IXF0 933 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 FUKQ8N0W3 1084 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 SLC44A3Q8N4M1 653 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 ANKRD52Q8NB46 1076 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 SLC4A11Q8NBS3 891 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 SHKBP1Q8TBC3 707 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 OVCA2Q8WZ82 227 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 EDAQ92838 391 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 SMARCD2Q92925 531 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 FBXO32Q969P5 355 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 C1QTNF1Q9BXJ1 281 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 LRRC3Q9BY71 257 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 CSNK1G1Q9HCP0 422 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 PNPLA8Q9NP80 782 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 CD320Q9NPF0 282 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 TAB2Q9NYJ8 693 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 LIMA1Q9UHB6 759 aaKnown RBP8.7□□□□□ -1.02
PNKP-226ENST00000636840 DOCK6Q96HP0 2047 aa8.7□□□□□ -1.02
PNKP-226ENST00000636840 BDP1A6H8Y1 2624 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 UNC80Q8N2C7 3258 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 TRAV19A0A0A6YYK7 116 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ANHXE9PGG2 379 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 SERPINC1P01008 464 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ASGR2P07307 311 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 USP17L7P0C7H9 530 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 GJA1P17302 382 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 HDCP19113 662 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ACO1P21399 889 aaKnown RBP8.69□□□□□ -1.02
PNKP-226ENST00000636840 WEE1P30291 646 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 CCR2P41597 374 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 PSEN1P49768 467 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 BCAT1P54687 386 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ZXDAP98168 799 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 PFKPQ01813 784 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 UBXN1Q04323 297 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 BST2Q10589 180 aaKnown RBP8.69□□□□□ -1.02
PNKP-226ENST00000636840 TAF10Q12962 218 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 SLC5A9Q2M3M2 681 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 MIIPQ5JXC2 388 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 KLHDC7AQ5VTJ3 777 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 PAQR9Q6ZVX9 377 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 TADA2BQ86TJ2 420 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 MON1AQ86VX9 555 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 FMNL3Q8IVF7 1028 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ARID3BQ8IVW6 561 aaPredicted RBP8.69□□□□□ -1.02
PNKP-226ENST00000636840 ARHGEF19Q8IW93 802 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 MFSD6LQ8IWD5 586 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 CMTM8Q8IZV2 173 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 CELF5Q8N6W0 485 aaKnown RBP8.69□□□□□ -1.02
PNKP-226ENST00000636840 MAB21L3Q8N8X9 362 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 RBBP8NLQ8NC74 664 aaPredicted RBP8.69□□□□□ -1.02
PNKP-226ENST00000636840 NEK11Q8NG66 645 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ZSCAN18Q8TBC5 510 aaPredicted RBP8.69□□□□□ -1.02
PNKP-226ENST00000636840 FEZF2Q8TBJ5 459 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 DEPDC1BQ8WUY9 529 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ELSPBP1Q96BH3 223 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ASB16Q96NS5 453 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 TWNKQ96RR1 684 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 KCNK16Q96T55 309 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 SMOQ99835 787 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ARID3AQ99856 593 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ANP32EQ9BTT0 268 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 TRMT61BQ9BVS5 477 aaKnown RBP8.69□□□□□ -1.02
PNKP-226ENST00000636840 TTLL2Q9BWV7 592 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 PDCL3Q9H2J4 239 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 TRPV4Q9HBA0 871 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 LRRC4Q9HBW1 653 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 TRPC7Q9HCX4 862 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 ZNF334Q9HCZ1 680 aaPredicted RBP8.69□□□□□ -1.02
PNKP-226ENST00000636840 PLCB1Q9NQ66 1216 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 TLR8Q9NR97 1041 aaKnown RBP8.69□□□□□ -1.02
PNKP-226ENST00000636840 KRT82Q9NSB4 513 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 OBP2AQ9NY56 170 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 HMGXB4Q9UGU5 601 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 CHORDC1Q9UHD1 332 aaPredicted RBP8.69□□□□□ -1.02
PNKP-226ENST00000636840 MUTYHQ9UIF7 546 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 DNAJC12Q9UKB3 198 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 FBXL21Q9UKT6 434 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 NME7Q9Y5B8 376 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 NUMBLQ9Y6R0 609 aa8.69□□□□□ -1.02
PNKP-226ENST00000636840 STK25O00506 426 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 ZNF263O14978 683 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 THAP12O43422 761 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 MOSPD3O75425 235 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 CKMP06732 381 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 TPM3P06753 285 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 CCDC172P0C7W6 258 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 SETSIPP0DME0 302 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 RALAP11233 206 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 SRFP11831 508 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 PSMC3P17980 439 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 GNA15P30679 374 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 KRT9P35527 623 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 ACADSBP45954 432 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 SLC5A3P53794 718 aa8.68□□□□□ -1.02
PNKP-226ENST00000636840 CYP4F8P98187 520 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms