RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 FHOD1Q9Y613 1164 aa7.14□□□□□ -1.27
UPF3B-205ENST00000636792 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 SSU72P8A0A1W2PR75 194 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 C2orf71A6NGG8 1288 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 TRIM66O15016 1216 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 MFAP3LO75121 409 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 ADCY5O95622 1261 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 LSM8O95777 96 aaKnown RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 CPB1P15086 417 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 ATF2P15336 505 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 GNA15P30679 374 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 GNL1P36915 607 aaPredicted RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 PBX3P40426 434 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 TUFMP49411 452 aaKnown RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 NDST1P52848 882 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 BCAT1P54687 386 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 SLC8A3P57103 927 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 SNX16P57768 344 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 TBX2Q13207 712 aaPredicted RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 PLD1Q13393 1074 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 SGO2Q562F6 1265 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 SPOPLQ6IQ16 392 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 FAM171BQ6P995 826 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 TMEM270Q6UE05 265 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 SCARA5Q6ZMJ2 495 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 CCDC149Q6ZUS6 474 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 VPS36Q86VN1 386 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 CEP57Q86XR8 500 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 MRPL43Q8N983 215 aaKnown RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 MSANTD4Q8NCY6 345 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 CCDC112Q8NEF3 446 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 ZNF461Q8TAF7 563 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 MYCBPAPQ8TBZ2 947 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 EPS8L1Q8TE68 723 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 RIN2Q8WYP3 895 aaPredicted RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 SMARCD1Q96GM5 515 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 PDLIM2Q96JY6 352 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 PANX2Q96RD6 677 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 GAS2L1Q99501 681 aaPredicted RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 PKMYT1Q99640 499 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 ARID3AQ99856 593 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 VN1R3Q9BXE9 311 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 GPR88Q9GZN0 384 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 PLEKHA4Q9H4M7 779 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 NSUN3Q9H649 340 aaKnown RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 ABHD10Q9NUJ1 306 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 DZANK1Q9NVP4 752 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 ZNHIT6Q9NWK9 470 aaKnown RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 POLIQ9UNA4 740 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 PCDHB4Q9Y5E5 795 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 TRIOBPQ9H2D6 2365 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 ZNF638Q14966 1978 aaKnown RBP7.13□□□□□ -1.27
UPF3B-205ENST00000636792 MYO16Q9Y6X6 1858 aa7.13□□□□□ -1.27
UPF3B-205ENST00000636792 DENND4CQ5VZ89 1909 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 LRRC53A6NM62 1247 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 AKR1B15C9JRZ8 316 aaPredicted RBP7.12□□□□□ -1.27
UPF3B-205ENST00000636792 F8W810 466 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 GRM6O15303 877 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 AP5Z1O43299 807 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 ABLIM3O94929 683 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 SERPING1P05155 500 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 HNRNPA1P09651 372 aaKnown RBP eCLIP7.12□□□□□ -1.27
UPF3B-205ENST00000636792 WEE2P0C1S8 567 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 KRT5P13647 590 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 MYOGP15173 224 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 PTPN1P18031 435 aaKnown RBP7.12□□□□□ -1.27
UPF3B-205ENST00000636792 CDH5P33151 784 aaPredicted RBP7.12□□□□□ -1.27
UPF3B-205ENST00000636792 KRT9P35527 623 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 RAD23BP54727 409 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 RAB15P59190 212 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 RPL10AP62906 217 aaKnown RBP7.12□□□□□ -1.27
UPF3B-205ENST00000636792 ROR1Q01973 937 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 BST2Q10589 180 aaKnown RBP7.12□□□□□ -1.27
UPF3B-205ENST00000636792 LRMPQ12912 555 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 CNGA2Q16280 664 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 ARHGAP44Q17R89 818 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 SFMBT2Q5VUG0 894 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 LCLAT1Q6UWP7 414 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 RIPOR1Q6ZS17 1223 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 RRAGAQ7L523 313 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 PRICKLE2Q7Z3G6 844 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 TMC6Q7Z403 805 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 FAM35AQ86V20 835 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 SCML4Q8N228 414 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 SLC4A11Q8NBS3 891 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 OR8K1Q8NGG5 319 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 OR10T2Q8NGX3 314 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 STK32AQ8WU08 396 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 ARNTL2Q8WYA1 636 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 NOX5Q96PH1 765 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 HNRNPABQ99729 332 aaKnown RBP7.12□□□□□ -1.27
UPF3B-205ENST00000636792 RTP3Q9BQQ7 232 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 CLSTN3Q9BQT9 956 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 MRPL45Q9BRJ2 306 aaKnown RBP7.12□□□□□ -1.27
UPF3B-205ENST00000636792 UBXN6Q9BZV1 441 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 SDCBP2Q9H190 292 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 LHX5Q9H2C1 402 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 CSNK1G1Q9HCP0 422 aa7.12□□□□□ -1.27
UPF3B-205ENST00000636792 DMAP1Q9NPF5 467 aaPredicted RBP7.12□□□□□ -1.27
UPF3B-205ENST00000636792 NLRC4Q9NPP4 1024 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms