RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 IFRD2Q12894 506 aaPredicted RBP19.09■□□□□ 0.65
PNKP-225ENST00000636214 NR1H3Q13133 447 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 TDRD10Q5VZ19 366 aaKnown RBP19.09■□□□□ 0.65
PNKP-225ENST00000636214 SCARA5Q6ZMJ2 495 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 Q6ZS52 159 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 GPR161Q8N6U8 529 aaKnown RBP19.09■□□□□ 0.65
PNKP-225ENST00000636214 B3GALNT2Q8NCR0 500 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 C8orf48Q96LL4 319 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 SLITRK1Q96PX8 696 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 CYP2S1Q96SQ9 504 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 MED10Q9BTT4 135 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 HPS4Q9NQG7 708 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 CEP250Q9BV73 2442 aa19.09■□□□□ 0.65
PNKP-225ENST00000636214 C2orf78A6NCI8 922 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 ATG13O75143 517 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 ARSAP15289 507 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 NDUFA8P51970 172 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 USP4Q13107 963 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 CCINQ13939 588 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 PRR23BQ6ZRT6 265 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 DCLK2Q8N568 766 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 SH3RF2Q8TEC5 729 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 OSCP1Q8WVF1 389 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 IMPG2Q9BZV3 1241 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 DPEP3Q9H4B8 488 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 SMYD3Q9H7B4 428 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 VRTNQ9H8Y1 702 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 ATG2BQ96BY7 2078 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 MYH10P35580 1976 aa19.08■□□□□ 0.64
PNKP-225ENST00000636214 A0A1W2PQ27 194 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 A0A1W2PQ64 194 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 A0A1W2PQD8 194 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 TDGF1P13385 188 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 KRT13P13646 458 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 NOP14P78316 857 aaKnown RBP19.07■□□□□ 0.64
PNKP-225ENST00000636214 FOXK2Q01167 660 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 GAS6Q14393 721 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 BECN1Q14457 450 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 ZNF77Q15935 545 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 SGSM1Q2NKQ1 1148 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 HEATR6Q6AI08 1181 aaKnown RBP19.07■□□□□ 0.64
PNKP-225ENST00000636214 TMC2Q8TDI7 906 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 P2RY13Q9BPV8 354 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 ZNF518BQ9C0D4 1074 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 XYLT2Q9H1B5 865 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 KCTD10Q9H3F6 313 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 ECT2Q9H8V3 914 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 DMAC2Q9NW81 257 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 ARHGAP26Q9UNA1 814 aa19.07■□□□□ 0.64
PNKP-225ENST00000636214 HELZP42694 1942 aaKnown RBP19.06■□□□□ 0.64
PNKP-225ENST00000636214 TRDMT1O14717 391 aaKnown RBP19.06■□□□□ 0.64
PNKP-225ENST00000636214 RHOBTB3O94955 611 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 RTN3O95197 1032 aaPredicted RBP19.06■□□□□ 0.64
PNKP-225ENST00000636214 PAPSS2O95340 614 aaPredicted RBP19.06■□□□□ 0.64
PNKP-225ENST00000636214 NFATC1O95644 943 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 DRD1P21728 446 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 RPL13P26373 211 aaKnown RBP19.06■□□□□ 0.64
PNKP-225ENST00000636214 PIK3CAP42336 1068 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 TMEM196Q5HYL7 178 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 KRBA2Q6ZNG9 492 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 LONP2Q86WA8 852 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 CCDC150Q8NCX0 1101 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 PDZD8Q8NEN9 1154 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 PLEKHO2Q8TD55 490 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 TMEM174Q8WUU8 243 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 TAF4BQ92750 862 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 FBXO32Q969P5 355 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 SLC22A12Q96S37 553 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 TTLL2Q9BWV7 592 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 DNAI2Q9GZS0 605 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 GZF1Q9H116 711 aaPredicted RBP19.06■□□□□ 0.64
PNKP-225ENST00000636214 GCNT4Q9P109 453 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 USP18Q9UMW8 372 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 SLC8A2Q9UPR5 921 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 ZDHHC9Q9Y397 364 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 WNT6Q9Y6F9 365 aa19.06■□□□□ 0.64
PNKP-225ENST00000636214 GOLGA6L4A6NEF3 574 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 CHURC1-FNTBB4DL54 471 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 IKBKBO14920 756 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 C4BPAP04003 597 aaKnown RBP19.05■□□□□ 0.64
PNKP-225ENST00000636214 NR2F2P24468 414 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 YWHAQP27348 245 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 CNR2P34972 360 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 RAP1GAPP47736 663 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 FNTBP49356 437 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 CDH8P55286 799 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 USP46P62068 366 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 CLDN10P78369 228 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 TAF10Q12962 218 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 SIM2Q14190 667 aaPredicted RBP19.05■□□□□ 0.64
PNKP-225ENST00000636214 FBXO43Q4G163 708 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 CEP68Q76N32 757 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.05■□□□□ 0.64
PNKP-225ENST00000636214 DDX42Q86XP3 938 aaKnown RBP eCLIP19.05■□□□□ 0.64
PNKP-225ENST00000636214 NUP93Q8N1F7 819 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 CCDC26Q8TAB7 109 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 SMARCD1Q96GM5 515 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 CHAMP1Q96JM3 812 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 B3GNT5Q9BYG0 378 aa19.05■□□□□ 0.64
PNKP-225ENST00000636214 TRAF3IP3Q9Y228 551 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms