RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 CAPN11Q9UMQ6 739 aa9.02□□□□□ -0.96
CDKL5-209ENST00000635828 MYO10Q9HD67 2058 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 PATJQ8NI35 1801 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 COL4A3Q01955 1670 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 TNFRSF10BO14763 440 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 ATMINO43313 823 aaPredicted RBP9.02□□□□□ -0.97
CDKL5-209ENST00000635828 LCP1P13796 627 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 GPD2P43304 727 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 SLC5A3P53794 718 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 ZXDBP98169 803 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 CYP4F8P98187 520 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 CFAP221Q4G0U5 840 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 ANKRD54Q6NXT1 300 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 HFE2Q6ZVN8 426 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 PIGZQ86VD9 579 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 TNIP3Q96KP6 325 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 ZNF830Q96NB3 372 aaPredicted RBP9.02□□□□□ -0.97
CDKL5-209ENST00000635828 HNRNPABQ99729 332 aaKnown RBP9.02□□□□□ -0.97
CDKL5-209ENST00000635828 MIS12Q9H081 205 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 NCANO14594 1321 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 A0A1W2PRU2 124 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 GRAP2O75791 330 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 TBX18O95935 607 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 USP17L7P0C7H9 530 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 IL9P15248 144 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 DNAJB7Q7Z6W7 309 aaPredicted RBP9.02□□□□□ -0.97
CDKL5-209ENST00000635828 TCEAL8Q8IYN2 117 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 ADAM7Q9H2U9 754 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 POMKQ9H5K3 350 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 UBE2ZQ9H832 354 aaPredicted RBP9.02□□□□□ -0.97
CDKL5-209ENST00000635828 ST7Q9NRC1 585 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 ABHD10Q9NUJ1 306 aa9.02□□□□□ -0.97
CDKL5-209ENST00000635828 SEPT11Q9NVA2 429 aaKnown RBP9.02□□□□□ -0.97
CDKL5-209ENST00000635828 ZMYND10O75800 440 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 RAB6CQ53S08 254 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 PPM1LQ5SGD2 360 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 TMC8Q8IU68 726 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 DCP1BQ8IZD4 617 aaKnown RBP9.01□□□□□ -0.97
CDKL5-209ENST00000635828 RIN3Q8TB24 985 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 PABPC5Q96DU9 382 aaKnown RBP9.01□□□□□ -0.97
CDKL5-209ENST00000635828 SYT11Q9BT88 431 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 LRRC3Q9BY71 257 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 DUSP16Q9BY84 665 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 RAB6CQ9H0N0 254 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 DENND4CQ5VZ89 1909 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 C2orf78A6NCI8 922 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 MOSPD3O75425 235 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 NPR3P17342 541 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 ELF1P32519 619 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 NAA35Q5VZE5 725 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 DRC7Q8IY82 874 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 SLC35F5Q8WV83 523 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 MRFAP1L1Q96HT8 127 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 ADAM33Q9BZ11 813 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 NMUR1Q9HB89 426 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 SPTLC3Q9NUV7 552 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-209ENST00000635828 E5RJQ4 531 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 MDM4O15151 490 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 MFAP3LO75121 409 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 ERBB2P04626 1255 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 FAM200BP0CF97 657 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 VDRP11473 427 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 STAT1P42224 750 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 GFPT1Q06210 699 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-209ENST00000635828 ADIGQ0VDE8 80 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 PTPN20Q4JDL3 420 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 LCLAT1Q6UWP7 414 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 BHLHA9Q7RTU4 235 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 SMRP1Q8NCR6 262 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 NECAB3Q96P71 396 aaPredicted RBP9.01□□□□□ -0.97
CDKL5-209ENST00000635828 SMOC2Q9H3U7 446 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 CSNK1G1Q9HCP0 422 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 ADAMTS1Q9UHI8 967 aa9.01□□□□□ -0.97
CDKL5-209ENST00000635828 ITIH6Q6UXX5 1313 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 SLC38A8A6NNN8 435 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 DDX3XO00571 662 aaKnown RBP eCLIP9□□□□□ -0.97
CDKL5-209ENST00000635828 ABL1P00519 1130 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 RHOP08100 348 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 MYL4P12829 197 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 PITX1P78337 314 aaPredicted RBP9□□□□□ -0.97
CDKL5-209ENST00000635828 COL19A1Q14993 1142 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 LIN9Q5TKA1 542 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 TXNDC8Q6A555 127 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 PDE12Q6L8Q7 609 aaKnown RBP9□□□□□ -0.97
CDKL5-209ENST00000635828 ANKRD52Q8NB46 1076 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 SMG7Q92540 1137 aaKnown RBP9□□□□□ -0.97
CDKL5-209ENST00000635828 SMARCD1Q96GM5 515 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 PACSIN1Q9BY11 444 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 IL21Q9HBE4 155 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 LMCD1Q9NZU5 365 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 CALCOCO1Q9P1Z2 691 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 LUC7L2Q9Y383 392 aaKnown RBP9□□□□□ -0.97
CDKL5-209ENST00000635828 A0A087X0T9 212 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 SOWAHDA6NJG2 315 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 ZNF263O14978 683 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 CBFA2T2O43439 604 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 PAEPP09466 180 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 FAM228BP0C875 321 aa9□□□□□ -0.97
CDKL5-209ENST00000635828 CNGA2Q16280 664 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms