RNA–Protein interactions for RNA: ENST00000635652.1

PTPN11-206, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-206ENST00000635652 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 WNT6Q9Y6F9 365 aa13.47□□□□□ -0.25
PTPN11-206ENST00000635652 TPRP12270 2363 aaKnown RBP13.47□□□□□ -0.25
PTPN11-206ENST00000635652 PVALEFA0A1B0GWK0 134 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 C2orf78A6NCI8 922 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 TRIM66O15016 1216 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 RNF40O75150 1001 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 TACC1O75410 805 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 ABL1P00519 1130 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 DRD1P21728 446 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 HOXA6P31267 233 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 PDE6CP51160 858 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 ATXN1P54253 815 aaKnown RBP13.46□□□□□ -0.25
PTPN11-206ENST00000635652 USP46P62068 366 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 EHHADHQ08426 723 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 NR1H3Q13133 447 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 ZNF77Q15935 545 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 KNOP1Q1ED39 458 aaKnown RBP13.46□□□□□ -0.25
PTPN11-206ENST00000635652 RESP18Q5W5W9 173 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 PKN3Q6P5Z2 889 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 WDR5BQ86VZ2 330 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 GRAMD1CQ8IYS0 662 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 SH3RF2Q8TEC5 729 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 ATP2A3Q93084 1043 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 CHFRQ96EP1 664 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 P2RY13Q9BPV8 354 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 GCNT4Q9P109 453 aa13.46□□□□□ -0.25
PTPN11-206ENST00000635652 CGNQ9P2M7 1197 aaKnown RBP13.46□□□□□ -0.25
PTPN11-206ENST00000635652 CNOT1A5YKK6 2376 aaKnown RBP13.46□□□□□ -0.25
PTPN11-206ENST00000635652 A8MXQ7 604 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 F8VP50 259 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 LRP3O75074 770 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 PTPN1P18031 435 aaKnown RBP13.45□□□□□ -0.26
PTPN11-206ENST00000635652 CASP4P49662 377 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 MYL6P60660 151 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 DNM1Q05193 864 aaKnown RBP13.45□□□□□ -0.26
PTPN11-206ENST00000635652 PSMD2Q13200 908 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 BIRC3Q13489 604 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 BMT2Q1RMZ1 405 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 EML3Q32P44 896 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 NAIF1Q69YI7 327 aaPredicted RBP13.45□□□□□ -0.26
PTPN11-206ENST00000635652 ATL3Q6DD88 541 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 FAM160A2Q8N612 972 aaPredicted RBP13.45□□□□□ -0.26
PTPN11-206ENST00000635652 GOLGA5Q8TBA6 731 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 ZNF516Q92618 1163 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 CD101Q93033 1021 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 SYAP1Q96A49 352 aaPredicted RBP13.45□□□□□ -0.26
PTPN11-206ENST00000635652 CEP295NLQ96MC4 621 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 LINC00597Q9H2U6 94 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 POLR3BQ9NW08 1133 aaPredicted RBP13.45□□□□□ -0.26
PTPN11-206ENST00000635652 SERTAD1Q9UHV2 236 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 ARHGAP26Q9UNA1 814 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 NME7Q9Y5B8 376 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.45□□□□□ -0.26
PTPN11-206ENST00000635652 MYH10P35580 1976 aa13.45□□□□□ -0.26
PTPN11-206ENST00000635652 HELZP42694 1942 aaKnown RBP13.45□□□□□ -0.26
PTPN11-206ENST00000635652 FAM163BP0C2L3 166 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 CCDC192P0DO97 292 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 ATICP31939 592 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 IFRD2Q12894 506 aaPredicted RBP13.44□□□□□ -0.26
PTPN11-206ENST00000635652 USP4Q13107 963 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 PKP1Q13835 747 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 FBXO43Q4G163 708 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 TDRD10Q5VZ19 366 aaKnown RBP13.44□□□□□ -0.26
PTPN11-206ENST00000635652 C12orf56Q8IXR9 622 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 B3GALNT2Q8NCR0 500 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 RPLP0P6Q8NHW5 317 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 C8orf48Q96LL4 319 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 ELOVL4Q9GZR5 314 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 DPEP3Q9H4B8 488 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 SEMA4GQ9NTN9 838 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 RCOR1Q9UKL0 485 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 MYOFQ9NZM1 2061 aa13.44□□□□□ -0.26
PTPN11-206ENST00000635652 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.43□□□□□ -0.26
PTPN11-206ENST00000635652 DCDC2BA2VCK2 349 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 ZNF840PA6NDX5 716 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 LEFTY2O00292 366 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 CLDN5O00501 218 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 AXIN1O15169 862 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 RPP40O75818 363 aaKnown RBP13.43□□□□□ -0.26
PTPN11-206ENST00000635652 NFATC1O95644 943 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 STAU1O95793 577 aaKnown RBP13.43□□□□□ -0.26
PTPN11-206ENST00000635652 SLFN14P0C7P3 912 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 PFKLP17858 780 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 PPP3CCP48454 512 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 CACNA2D1P54289 1103 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 CDH8P55286 799 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 NOP14P78316 857 aaKnown RBP13.43□□□□□ -0.26
PTPN11-206ENST00000635652 TAF10Q12962 218 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 STK4Q13043 487 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 CSRP2Q16527 193 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 CACNA2D4Q7Z3S7 1137 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 CAMKK1Q8N5S9 505 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 GAB3Q8WWW8 586 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 PAGE5Q96GU1 130 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 SLITRK1Q96PX8 696 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 HHIPQ96QV1 700 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 RTKNQ9BST9 563 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 MED10Q9BTT4 135 aa13.43□□□□□ -0.26
PTPN11-206ENST00000635652 TTLL2Q9BWV7 592 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms